Task 38677254

Name test_320-GPUGRID_TEST_ATM_40STEP_20261023-25-40-RND1714_0
Workunit 31619134
Created 26 Oct 2026, 13:45:03 UTC
Sent 26 Oct 2026, 13:45:07 UTC
Report deadline 31 Oct 2026, 13:45:07 UTC
Received 26 Oct 2026, 16:04:13 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654843
Run time 49 min 12 sec
CPU time 40 min 40 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 13,171.24 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 668.99 MB
Peak swap size 1.56 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
17:15:30 (5260): wrapper (7.9.26016): starting
17:15:30 (5260): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:15:32 (5260): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:15:32 (5260): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
18:02:07 (5260): C:/Windows/system32/cmd.exe exited; CPU time 2440.671875
18:02:07 (5260): called boinc_finish(0)
0 bytes in 0 Free Blocks.
576 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 30145763 bytes.
Dumping objects ->
{3835229} normal block at 0x0000026540E92C20, 48 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835218} normal block at 0x0000026540E92130, 48 bytes long.
 Data: <HOME=D:\ProgramD> 48 4F 4D 45 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835207} normal block at 0x0000026540E92670, 48 bytes long.
 Data: <TMP=D:\ProgramDa> 54 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835196} normal block at 0x0000026540E92BB0, 48 bytes long.
 Data: <TEMP=D:\ProgramD> 54 45 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835185} normal block at 0x0000026540E91F00, 48 bytes long.
 Data: <TMPDIR=D:\Progra> 54 4D 50 44 49 52 3D 44 3A 5C 50 72 6F 67 72 61 
{3835154} normal block at 0x0000026540F3BBC0, 64 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835143} normal block at 0x000002653F4CDD30, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835140} normal block at 0x000002653F3E6BD0, 8 bytes long.
 Data: <  ;?e   > 00 00 3B 3F 65 02 00 00 
{3834539} normal block at 0x000002653F4CD550, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833945} normal block at 0x000002653F3E61D0, 8 bytes long.
 Data: <&#224;-&#233;@e   > E0 2D E9 40 65 02 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x000002653F3EF810, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002653F3DA0D0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x000002653F3F0670, 16 bytes long.
 Data: < -??e           > 18 2D 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002653F3F1110, 16 bytes long.
 Data: <&#240;,??e           > F0 2C 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002653F3EC740, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x000002653F3F1520, 16 bytes long.
 Data: <&#200;,??e           > C8 2C 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002653F3F1480, 16 bytes long.
 Data: <&#160;,??e           > A0 2C 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002653F3F1020, 16 bytes long.
 Data: <x,??e           > 78 2C 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002653F3F0FD0, 16 bytes long.
 Data: <P,??e           > 50 2C 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002653F3EABD0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x000002653F3F0F30, 16 bytes long.
 Data: <8Z=?e           > 38 5A 3D 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002653F3EC4A0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x000002653F3F10C0, 16 bytes long.
 Data: < Z=?e           > 10 5A 3D 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002653F3F12F0, 16 bytes long.
 Data: <&#232;Y=?e           > E8 59 3D 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002653F3F0EE0, 16 bytes long.
 Data: <&#192;Y=?e           > C0 59 3D 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002653F3F0D00, 16 bytes long.
 Data: < Y=?e           > 98 59 3D 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002653F3F12A0, 16 bytes long.
 Data: <pY=?e           > 70 59 3D 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002653F3F0C10, 16 bytes long.
 Data: <HY=?e           > 48 59 3D 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002653F3EC620, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x000002653F3F1160, 16 bytes long.
 Data: < Y=?e           > 20 59 3D 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002653F3D5920, 320 bytes long.
 Data: <` ??e    &#198;>?e   > 60 11 3F 3F 65 02 00 00 20 C6 3E 3F 65 02 00 00 
{268} normal block at 0x000002653F3F0620, 16 bytes long.
 Data: <0,??e           > 30 2C 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002653F3F1430, 16 bytes long.
 Data: < ,??e           > 08 2C 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002653F3EC080, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x000002653F3F0E90, 16 bytes long.
 Data: <&#224;+??e           > E0 2B 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002653F3EBC00, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x000002653F3F09E0, 16 bytes long.
 Data: <(+??e           > 28 2B 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002653F3F0760, 16 bytes long.
 Data: < +??e           > 00 2B 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002653F3F0990, 16 bytes long.
 Data: <&#216;*??e           > D8 2A 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002653F3F0C60, 16 bytes long.
 Data: <&#176;*??e           > B0 2A 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002653F3F0710, 16 bytes long.
 Data: < *??e           > 88 2A 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002653F3F13E0, 16 bytes long.
 Data: <`*??e           > 60 2A 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002653F3F0B20, 16 bytes long.
 Data: <&#240;&#170;>?e           > F0 AA 3E 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002653F3EAAF0, 40 bytes long.
 Data: <  ??e   &#192;&#187;&#243;@e   > 20 0B 3F 3F 65 02 00 00 C0 BB F3 40 65 02 00 00 
{254} normal block at 0x000002653F3F0800, 16 bytes long.
 Data: <@*??e           > 40 2A 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000002653F3F0B70, 16 bytes long.
 Data: < *??e           > 18 2A 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000002653F3ECAA0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x000002653F3F14D0, 16 bytes long.
 Data: <&#240;)??e           > F0 29 3F 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000002653F3F29F0, 992 bytes long.
 Data: <&#208; ??e   &#160;&#202;>?e   > D0 14 3F 3F 65 02 00 00 A0 CA 3E 3F 65 02 00 00 
{86} normal block at 0x000002653F3EC320, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x000002653F3E63B0, 16 bytes long.
 Data: < &#170;>?e           > 10 AA 3E 3F 65 02 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x000002653F3EAA10, 40 bytes long.
 Data: <&#176;c>?e    &#195;>?e   > B0 63 3E 3F 65 02 00 00 20 C3 3E 3F 65 02 00 00 
{63} normal block at 0x000002653F3E5D70, 16 bytes long.
 Data: < &#234;&#137;&#239;&#247;           > 80 EA 89 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002653F3E6630, 16 bytes long.
 Data: <@&#233;&#137;&#239;&#247;           > 40 E9 89 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002653F3E5D20, 16 bytes long.
 Data: <&#248;W&#134;&#239;&#247;           > F8 57 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002653F3E6180, 16 bytes long.
 Data: <&#216;W&#134;&#239;&#247;           > D8 57 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002653F3E6950, 16 bytes long.
 Data: <P &#134;&#239;&#247;           > 50 04 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002653F3E6A40, 16 bytes long.
 Data: <0 &#134;&#239;&#247;           > 30 04 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002653F3E6450, 16 bytes long.
 Data: <&#224; &#134;&#239;&#247;           > E0 02 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002653F3E5DC0, 16 bytes long.
 Data: <  &#134;&#239;&#247;           > 10 04 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002653F3E5F00, 16 bytes long.
 Data: <p &#134;&#239;&#247;           > 70 04 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000002653F3E6B80, 16 bytes long.
 Data: < &#192;&#132;&#239;&#247;           > 18 C0 84 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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