Task 38676824

Name test_909-GPUGRID_TEST_ATM_40STEP_20261023-29-40-RND7100_1
Workunit 31618664
Created 26 Oct 2026, 12:28:01 UTC
Sent 26 Oct 2026, 12:28:07 UTC
Report deadline 31 Oct 2026, 12:28:07 UTC
Received 26 Oct 2026, 14:40:23 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 653612
Run time 1 hours 28 min 54 sec
CPU time 1 hours 20 min 41 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 2,141.69 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 642.35 MB
Peak swap size 2.97 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
21:11:41 (9680): wrapper (7.9.26016): starting
21:11:41 (9680): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:11:51 (9680): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:11:51 (9680): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:39:53 (9680): C:/Windows/system32/cmd.exe exited; CPU time 4841.625000
22:39:53 (9680): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 68624847 bytes.
Dumping objects ->
{3835525} normal block at 0x0000022949BC4A60, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835514} normal block at 0x0000022947C64EF0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835503} normal block at 0x0000022947C64E80, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835492} normal block at 0x0000022947C64CC0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835481} normal block at 0x0000022947C64C50, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835450} normal block at 0x0000022949B375D0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835437} normal block at 0x0000022947C60590, 8 bytes long.
 Data: <   G)   > 00 00 F9 47 29 02 00 00 
{3834053} normal block at 0x0000022947C606D0, 8 bytes long.
 Data: < K I)   > C0 4B B9 49 29 02 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x0000022947C5ECF0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000022947C55520, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x0000022947C66250, 16 bytes long.
 Data: < T G)           > 88 54 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000022947C658A0, 16 bytes long.
 Data: <`T G)           > 60 54 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000022947C5F620, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x0000022947C660C0, 16 bytes long.
 Data: <8T G)           > 38 54 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000022947C65DA0, 16 bytes long.
 Data: < T G)           > 10 54 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000022947C65E90, 16 bytes long.
 Data: < S G)           > E8 53 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000022947C657B0, 16 bytes long.
 Data: < S G)           > C0 53 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000022947C647F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x0000022947C66020, 16 bytes long.
 Data: <x  G)           > 78 8B C5 47 29 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000022947C5F440, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x0000022947C65BC0, 16 bytes long.
 Data: <P  G)           > 50 8B C5 47 29 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000022947C65A80, 16 bytes long.
 Data: <(  G)           > 28 8B C5 47 29 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000022947C66160, 16 bytes long.
 Data: <   G)           > 00 8B C5 47 29 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000022947C66480, 16 bytes long.
 Data: <   G)           > D8 8A C5 47 29 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000022947C664D0, 16 bytes long.
 Data: <   G)           > B0 8A C5 47 29 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000022947C65EE0, 16 bytes long.
 Data: <   G)           > 88 8A C5 47 29 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000022947C5FE60, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x0000022947C65800, 16 bytes long.
 Data: <`  G)           > 60 8A C5 47 29 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000022947C58A60, 320 bytes long.
 Data: < X G)   `  G)   > 00 58 C6 47 29 02 00 00 60 FE C5 47 29 02 00 00 
{275} normal block at 0x0000022947C65A30, 16 bytes long.
 Data: < S G)           > A0 53 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000022947C65850, 16 bytes long.
 Data: <xS G)           > 78 53 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000022947C60220, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x0000022947C65FD0, 16 bytes long.
 Data: <PS G)           > 50 53 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000022947C5F9E0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x0000022947C65DF0, 16 bytes long.
 Data: < R G)           > 98 52 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000022947C66070, 16 bytes long.
 Data: <pR G)           > 70 52 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000022947C66200, 16 bytes long.
 Data: <HR G)           > 48 52 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000022947C661B0, 16 bytes long.
 Data: < R G)           > 20 52 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000022947C611C0, 16 bytes long.
 Data: < Q G)           > F8 51 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000022947C61080, 16 bytes long.
 Data: < Q G)           > D0 51 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000022947C61170, 16 bytes long.
 Data: <pK G)           > 70 4B C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000022947C64B70, 40 bytes long.
 Data: <p  G)    u I)   > 70 11 C6 47 29 02 00 00 D0 75 B3 49 29 02 00 00 
{261} normal block at 0x0000022947C60F40, 16 bytes long.
 Data: < Q G)           > B0 51 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000022947C61350, 16 bytes long.
 Data: < Q G)           > 88 51 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000022947C5FE00, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x0000022947C61120, 16 bytes long.
 Data: <`Q G)           > 60 51 C6 47 29 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000022947C65160, 992 bytes long.
 Data: <   G)      G)   > 20 11 C6 47 29 02 00 00 00 FE C5 47 29 02 00 00 
{93} normal block at 0x0000022947C5FC80, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x0000022947C60540, 16 bytes long.
 Data: <@  G)           > 40 B4 C4 47 29 02 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x0000022947C4B440, 40 bytes long.
 Data: <@  G)      G)   > 40 05 C6 47 29 02 00 00 80 FC C5 47 29 02 00 00 
{68} normal block at 0x0000022947C60630, 16 bytes long.
 Data: <  a>            > 80 EA 61 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000022947C61300, 16 bytes long.
 Data: <@ a>            > 40 E9 61 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000022947C604F0, 16 bytes long.
 Data: < W^>            > F8 57 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000022947C60B80, 16 bytes long.
 Data: < W^>            > D8 57 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000022947C60860, 16 bytes long.
 Data: <P ^>            > 50 04 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000022947C60CC0, 16 bytes long.
 Data: <0 ^>            > 30 04 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000022947C60FE0, 16 bytes long.
 Data: <  ^>            > E0 02 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000022947C60EA0, 16 bytes long.
 Data: <  ^>            > 10 04 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000022947C60450, 16 bytes long.
 Data: <p ^>            > 70 04 5E 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000022947C605E0, 16 bytes long.
 Data: <  \>            > 18 C0 5C 3E F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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