Task 38676703

Name test_858-GPUGRID_TEST_ATM_40STEP_20261023-27-40-RND7155_0
Workunit 31618604
Created 26 Oct 2026, 12:05:11 UTC
Sent 26 Oct 2026, 12:05:30 UTC
Report deadline 31 Oct 2026, 12:05:30 UTC
Received 26 Oct 2026, 12:45:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 646261
Run time 19 min 28 sec
CPU time 18 min 42 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 39,048.75 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 729.02 MB
Peak swap size 13.02 GB
Peak disk usage 4.07 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
13:25:38 (41876): wrapper (7.9.26016): starting
13:25:38 (41876): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
13:25:39 (41876): Library/usr/bin/tar.exe exited; CPU time 0.015625
13:25:39 (41876): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
13:44:34 (41876): C:/Windows/system32/cmd.exe exited; CPU time 1122.828125
13:44:34 (41876): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 24130071 bytes.
Dumping objects ->
{3835519} normal block at 0x000001F48C8A5DF0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835508} normal block at 0x000001F48C8A6330, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835497} normal block at 0x000001F48C8A6250, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835486} normal block at 0x000001F48C8A5D80, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835475} normal block at 0x000001F48C8A5760, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835444} normal block at 0x000001F48C8AD910, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835431} normal block at 0x000001F48AA6E490, 8 bytes long.
 Data: <  &#253;&#138;&#244;   > 00 00 FD 8A F4 01 00 00 
{3833967} normal block at 0x000001F48AA6E440, 8 bytes long.
 Data: <&#224;F&#149;&#140;&#244;   > E0 46 95 8C F4 01 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x000001F48AA72250, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001F48AA663F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x000001F48AA76800, 16 bytes long.
 Data: < o&#167;&#138;&#244;           > 08 6F A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001F48AA763F0, 16 bytes long.
 Data: <&#224;n&#167;&#138;&#244;           > E0 6E A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001F48AA70180, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x000001F48AA76490, 16 bytes long.
 Data: <&#184;n&#167;&#138;&#244;           > B8 6E A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001F48AA768F0, 16 bytes long.
 Data: < n&#167;&#138;&#244;           > 90 6E A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001F48AA76260, 16 bytes long.
 Data: <hn&#167;&#138;&#244;           > 68 6E A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001F48AA768A0, 16 bytes long.
 Data: <@n&#167;&#138;&#244;           > 40 6E A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001F48AA742E0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x000001F48AA76170, 16 bytes long.
 Data: <(&#244;&#165;&#138;&#244;           > 28 F4 A5 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001F48AA6F820, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x000001F48AA76210, 16 bytes long.
 Data: < &#244;&#165;&#138;&#244;           > 00 F4 A5 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001F48AA76030, 16 bytes long.
 Data: <&#216;&#243;&#165;&#138;&#244;           > D8 F3 A5 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001F48AA75EA0, 16 bytes long.
 Data: <&#176;&#243;&#165;&#138;&#244;           > B0 F3 A5 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001F48AA763A0, 16 bytes long.
 Data: < &#243;&#165;&#138;&#244;           > 88 F3 A5 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001F48AA75FE0, 16 bytes long.
 Data: <`&#243;&#165;&#138;&#244;           > 60 F3 A5 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001F48AA767B0, 16 bytes long.
 Data: <8&#243;&#165;&#138;&#244;           > 38 F3 A5 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001F48AA700C0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x000001F48AA76AD0, 16 bytes long.
 Data: < &#243;&#165;&#138;&#244;           > 10 F3 A5 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001F48AA5F310, 320 bytes long.
 Data: <&#208;j&#167;&#138;&#244;   &#192; &#167;&#138;&#244;   > D0 6A A7 8A F4 01 00 00 C0 00 A7 8A F4 01 00 00 
{279} normal block at 0x000001F48AA75E50, 16 bytes long.
 Data: < n&#167;&#138;&#244;           > 20 6E A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001F48AA76080, 16 bytes long.
 Data: <&#248;m&#167;&#138;&#244;           > F8 6D A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001F48AA6FCA0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x000001F48AA76A80, 16 bytes long.
 Data: <&#208;m&#167;&#138;&#244;           > D0 6D A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001F48AA6F6A0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x000001F48AA76990, 16 bytes long.
 Data: < m&#167;&#138;&#244;           > 18 6D A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001F48AA76120, 16 bytes long.
 Data: <&#240;l&#167;&#138;&#244;           > F0 6C A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001F48AA75DB0, 16 bytes long.
 Data: <&#200;l&#167;&#138;&#244;           > C8 6C A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001F48AA766C0, 16 bytes long.
 Data: <&#160;l&#167;&#138;&#244;           > A0 6C A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001F48AA76760, 16 bytes long.
 Data: <xl&#167;&#138;&#244;           > 78 6C A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001F48AA76440, 16 bytes long.
 Data: <Pl&#167;&#138;&#244;           > 50 6C A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001F48AA75EF0, 16 bytes long.
 Data: < A&#167;&#138;&#244;           > 20 41 A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001F48AA74120, 40 bytes long.
 Data: <&#240;^&#167;&#138;&#244;    &#217;&#138;&#140;&#244;   > F0 5E A7 8A F4 01 00 00 10 D9 8A 8C F4 01 00 00 
{265} normal block at 0x000001F48AA75F90, 16 bytes long.
 Data: <0l&#167;&#138;&#244;           > 30 6C A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001F48AA76850, 16 bytes long.
 Data: < l&#167;&#138;&#244;           > 08 6C A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001F48AA6F8E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x000001F48AA76580, 16 bytes long.
 Data: <&#224;k&#167;&#138;&#244;           > E0 6B A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001F48AA76BE0, 992 bytes long.
 Data: < e&#167;&#138;&#244;   &#224;&#248;&#166;&#138;&#244;   > 80 65 A7 8A F4 01 00 00 E0 F8 A6 8A F4 01 00 00 
{97} normal block at 0x000001F48AA70420, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x000001F48AA6DB30, 16 bytes long.
 Data: <&#160;D&#167;&#138;&#244;           > A0 44 A7 8A F4 01 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x000001F48AA744A0, 40 bytes long.
 Data: <0&#219;&#166;&#138;&#244;     &#167;&#138;&#244;   > 30 DB A6 8A F4 01 00 00 20 04 A7 8A F4 01 00 00 
{74} normal block at 0x000001F48AA6E170, 16 bytes long.
 Data: < &#234;T&#146;&#246;           > 80 EA 54 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001F48AA6D8B0, 16 bytes long.
 Data: <@&#233;T&#146;&#246;           > 40 E9 54 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001F48AA6DBD0, 16 bytes long.
 Data: <&#248;WQ&#146;&#246;           > F8 57 51 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001F48AA6E0D0, 16 bytes long.
 Data: <&#216;WQ&#146;&#246;           > D8 57 51 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001F48AA6D810, 16 bytes long.
 Data: <P Q&#146;&#246;           > 50 04 51 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001F48AA6E530, 16 bytes long.
 Data: <0 Q&#146;&#246;           > 30 04 51 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001F48AA6E260, 16 bytes long.
 Data: <&#224; Q&#146;&#246;           > E0 02 51 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001F48AA6D7C0, 16 bytes long.
 Data: <  Q&#146;&#246;           > 10 04 51 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001F48AA6DE00, 16 bytes long.
 Data: <p Q&#146;&#246;           > 70 04 51 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001F48AA6DA40, 16 bytes long.
 Data: < &#192;O&#146;&#246;           > 18 C0 4F 92 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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