Task 38676381

Name test_320-GPUGRID_TEST_ATM_40STEP_20261023-24-40-RND1714_0
Workunit 31618302
Created 26 Oct 2026, 11:09:44 UTC
Sent 26 Oct 2026, 11:09:52 UTC
Report deadline 31 Oct 2026, 11:09:52 UTC
Received 26 Oct 2026, 13:44:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654843
Run time 49 min 13 sec
CPU time 40 min 36 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 13,171.24 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 669.82 MB
Peak swap size 1.56 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
14:55:54 (6932): wrapper (7.9.26016): starting
14:55:54 (6932): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
14:55:56 (6932): Library/usr/bin/tar.exe exited; CPU time 0.000000
14:55:56 (6932): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
15:42:32 (6932): C:/Windows/system32/cmd.exe exited; CPU time 2436.750000
15:42:32 (6932): called boinc_finish(0)
0 bytes in 0 Free Blocks.
576 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 30199421 bytes.
Dumping objects ->
{3835229} normal block at 0x000002710E909AB0, 48 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835218} normal block at 0x000002710E909C00, 48 bytes long.
 Data: <HOME=D:\ProgramD> 48 4F 4D 45 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835207} normal block at 0x000002710E909B90, 48 bytes long.
 Data: <TMP=D:\ProgramDa> 54 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835196} normal block at 0x000002710E909F80, 48 bytes long.
 Data: <TEMP=D:\ProgramD> 54 45 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835185} normal block at 0x000002710E909F10, 48 bytes long.
 Data: <TMPDIR=D:\Progra> 54 4D 50 44 49 52 3D 44 3A 5C 50 72 6F 67 72 61 
{3835154} normal block at 0x000002710E8AE910, 64 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835143} normal block at 0x000002710CE9AF80, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835140} normal block at 0x000002710CE67BA0, 8 bytes long.
 Data: <  &#222; q   > 00 00 DE 0C 71 02 00 00 
{3834539} normal block at 0x000002710CE9B220, 160 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833945} normal block at 0x000002710CE67A60, 8 bytes long.
 Data: <P?&#149; q   > 50 3F 95 0E 71 02 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x000002710CE716C0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002710CE55AA0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x000002710CE72E80, 16 bytes long.
 Data: <&#200;G&#231; q           > C8 47 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002710CE72980, 16 bytes long.
 Data: <&#160;G&#231; q           > A0 47 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002710CE6D9D0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x000002710CE73060, 16 bytes long.
 Data: <xG&#231; q           > 78 47 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002710CE72C00, 16 bytes long.
 Data: <PG&#231; q           > 50 47 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002710CE72E30, 16 bytes long.
 Data: <(G&#231; q           > 28 47 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002710CE72F70, 16 bytes long.
 Data: < G&#231; q           > 00 47 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002710CE6C9A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x000002710CE73100, 16 bytes long.
 Data: <8Z&#229; q           > 38 5A E5 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002710CE6E5D0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x000002710CE72DE0, 16 bytes long.
 Data: < Z&#229; q           > 10 5A E5 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002710CE72AC0, 16 bytes long.
 Data: <&#232;Y&#229; q           > E8 59 E5 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002710CE72930, 16 bytes long.
 Data: <&#192;Y&#229; q           > C0 59 E5 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002710CE73240, 16 bytes long.
 Data: < Y&#229; q           > 98 59 E5 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002710CE728E0, 16 bytes long.
 Data: <pY&#229; q           > 70 59 E5 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002710CE726B0, 16 bytes long.
 Data: <HY&#229; q           > 48 59 E5 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002710CE6DA30, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x000002710CE73330, 16 bytes long.
 Data: < Y&#229; q           > 20 59 E5 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002710CE55920, 320 bytes long.
 Data: <03&#231; q   0&#218;&#230; q   > 30 33 E7 0C 71 02 00 00 30 DA E6 0C 71 02 00 00 
{268} normal block at 0x000002710CE733D0, 16 bytes long.
 Data: <&#224;F&#231; q           > E0 46 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002710CE73380, 16 bytes long.
 Data: <&#184;F&#231; q           > B8 46 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002710CE6D970, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x000002710CE72D40, 16 bytes long.
 Data: < F&#231; q           > 90 46 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002710CE6E2D0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x000002710CE72CA0, 16 bytes long.
 Data: <&#216;E&#231; q           > D8 45 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002710CE72890, 16 bytes long.
 Data: <&#176;E&#231; q           > B0 45 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002710CE72FC0, 16 bytes long.
 Data: < E&#231; q           > 88 45 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002710CE72750, 16 bytes long.
 Data: <`E&#231; q           > 60 45 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002710CE72BB0, 16 bytes long.
 Data: <8E&#231; q           > 38 45 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002710CE72660, 16 bytes long.
 Data: < E&#231; q           > 10 45 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002710CE730B0, 16 bytes long.
 Data: < &#205;&#230; q           > 90 CD E6 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002710CE6CD90, 40 bytes long.
 Data: <&#176;0&#231; q    &#233;&#138; q   > B0 30 E7 0C 71 02 00 00 10 E9 8A 0E 71 02 00 00 
{254} normal block at 0x000002710CE725C0, 16 bytes long.
 Data: <&#240;D&#231; q           > F0 44 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000002710CE731F0, 16 bytes long.
 Data: <&#200;D&#231; q           > C8 44 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000002710CE6E1B0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x000002710CE731A0, 16 bytes long.
 Data: <&#160;D&#231; q           > A0 44 E7 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000002710CE744A0, 992 bytes long.
 Data: <&#160;1&#231; q   &#176;&#225;&#230; q   > A0 31 E7 0C 71 02 00 00 B0 E1 E6 0C 71 02 00 00 
{86} normal block at 0x000002710CE6DC10, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x000002710CE67D80, 16 bytes long.
 Data: < &#205;&#230; q           > 20 CD E6 0C 71 02 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x000002710CE6CD20, 40 bytes long.
 Data: < }&#230; q    &#220;&#230; q   > 80 7D E6 0C 71 02 00 00 10 DC E6 0C 71 02 00 00 
{63} normal block at 0x000002710CE68140, 16 bytes long.
 Data: < &#234;&#137;&#239;&#247;           > 80 EA 89 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002710CE67F60, 16 bytes long.
 Data: <@&#233;&#137;&#239;&#247;           > 40 E9 89 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002710CE68820, 16 bytes long.
 Data: <&#248;W&#134;&#239;&#247;           > F8 57 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002710CE682D0, 16 bytes long.
 Data: <&#216;W&#134;&#239;&#247;           > D8 57 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002710CE68230, 16 bytes long.
 Data: <P &#134;&#239;&#247;           > 50 04 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002710CE68730, 16 bytes long.
 Data: <0 &#134;&#239;&#247;           > 30 04 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002710CE67C90, 16 bytes long.
 Data: <&#224; &#134;&#239;&#247;           > E0 02 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002710CE686E0, 16 bytes long.
 Data: <  &#134;&#239;&#247;           > 10 04 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002710CE680F0, 16 bytes long.
 Data: <p &#134;&#239;&#247;           > 70 04 86 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000002710CE67DD0, 16 bytes long.
 Data: < &#192;&#132;&#239;&#247;           > 18 C0 84 EF F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra