Task 38676067

Name test_674-GPUGRID_TEST_ATM_40STEP_20261023-30-40-RND7016_0
Workunit 31618003
Created 26 Oct 2026, 10:09:48 UTC
Sent 26 Oct 2026, 10:09:52 UTC
Report deadline 31 Oct 2026, 10:09:52 UTC
Received 26 Oct 2026, 11:15:10 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 649737
Run time 1 hours 3 min 5 sec
CPU time 1 hours 0 min 44 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 4,635.92 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 669.41 MB
Peak swap size 3.71 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:12:25 (23476): wrapper (7.9.26016): starting
23:12:25 (23476): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
23:12:27 (23476): Library/usr/bin/tar.exe exited; CPU time 0.000000
23:12:27 (23476): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
00:14:12 (23476): C:/Windows/system32/cmd.exe exited; CPU time 3644.906250
00:14:12 (23476): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 62539027 bytes.
Dumping objects ->
{3835297} normal block at 0x00000178E878B560, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835286} normal block at 0x00000178E878A6F0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835275} normal block at 0x00000178E878B100, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835264} normal block at 0x00000178E6C7C650, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835253} normal block at 0x00000178E6C7C500, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835222} normal block at 0x00000178E87D2E40, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835211} normal block at 0x00000178E87ECAA0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835208} normal block at 0x00000178E6C778B0, 8 bytes long.
 Data: <  &#193;&#230;x   > 00 00 C1 E6 78 01 00 00 
{3834578} normal block at 0x00000178E87ECB50, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833951} normal block at 0x00000178E6C779A0, 8 bytes long.
 Data: <&#208;)&#134;&#232;x   > D0 29 86 E8 78 01 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x00000178E6C80F10, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000178E6C6AED0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x00000178E6C82A40, 16 bytes long.
 Data: <XE&#200;&#230;x           > 58 45 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000178E6C82180, 16 bytes long.
 Data: <0E&#200;&#230;x           > 30 45 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000178E6C7D5B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x00000178E6C82040, 16 bytes long.
 Data: < E&#200;&#230;x           > 08 45 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000178E6C82450, 16 bytes long.
 Data: <&#224;D&#200;&#230;x           > E0 44 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000178E6C829A0, 16 bytes long.
 Data: <&#184;D&#200;&#230;x           > B8 44 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000178E6C82950, 16 bytes long.
 Data: < D&#200;&#230;x           > 90 44 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000178E6C7C030, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x00000178E6C82D10, 16 bytes long.
 Data: <X\&#198;&#230;x           > 58 5C C6 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000178E6C7E330, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x00000178E6C81FF0, 16 bytes long.
 Data: <0\&#198;&#230;x           > 30 5C C6 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000178E6C829F0, 16 bytes long.
 Data: < \&#198;&#230;x           > 08 5C C6 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000178E6C82310, 16 bytes long.
 Data: <&#224;[&#198;&#230;x           > E0 5B C6 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000178E6C81FA0, 16 bytes long.
 Data: <&#184;[&#198;&#230;x           > B8 5B C6 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000178E6C822C0, 16 bytes long.
 Data: < [&#198;&#230;x           > 90 5B C6 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000178E6C81F50, 16 bytes long.
 Data: <h[&#198;&#230;x           > 68 5B C6 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000178E6C7D970, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x00000178E6C827C0, 16 bytes long.
 Data: <@[&#198;&#230;x           > 40 5B C6 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000178E6C65B40, 320 bytes long.
 Data: <&#192;'&#200;&#230;x   p&#217;&#199;&#230;x   > C0 27 C8 E6 78 01 00 00 70 D9 C7 E6 78 01 00 00 
{271} normal block at 0x00000178E6C82770, 16 bytes long.
 Data: <pD&#200;&#230;x           > 70 44 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000178E6C820E0, 16 bytes long.
 Data: <HD&#200;&#230;x           > 48 44 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000178E6C7D730, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x00000178E6C82270, 16 bytes long.
 Data: < D&#200;&#230;x           > 20 44 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000178E6C7E270, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x00000178E6C82810, 16 bytes long.
 Data: <hC&#200;&#230;x           > 68 43 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000178E6C81F00, 16 bytes long.
 Data: <@C&#200;&#230;x           > 40 43 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000178E6C826D0, 16 bytes long.
 Data: < C&#200;&#230;x           > 18 43 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000178E6C82900, 16 bytes long.
 Data: <&#240;B&#200;&#230;x           > F0 42 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000178E6C828B0, 16 bytes long.
 Data: <&#200;B&#200;&#230;x           > C8 42 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000178E6C82D60, 16 bytes long.
 Data: <&#160;B&#200;&#230;x           > A0 42 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000178E6C825E0, 16 bytes long.
 Data: <&#192;&#191;&#199;&#230;x           > C0 BF C7 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000178E6C7BFC0, 40 bytes long.
 Data: <&#224;%&#200;&#230;x   @.}&#232;x   > E0 25 C8 E6 78 01 00 00 40 2E 7D E8 78 01 00 00 
{257} normal block at 0x00000178E6C81E60, 16 bytes long.
 Data: < B&#200;&#230;x           > 80 42 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000178E6C82680, 16 bytes long.
 Data: <XB&#200;&#230;x           > 58 42 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000178E6C7DCD0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x00000178E6C82400, 16 bytes long.
 Data: <0B&#200;&#230;x           > 30 42 C8 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x00000178E6C84230, 992 bytes long.
 Data: < $&#200;&#230;x   &#208;&#220;&#199;&#230;x   > 00 24 C8 E6 78 01 00 00 D0 DC C7 E6 78 01 00 00 
{89} normal block at 0x00000178E6C7DF70, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x00000178E6C77FE0, 16 bytes long.
 Data: <&#160;&#192;&#199;&#230;x           > A0 C0 C7 E6 78 01 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x00000178E6C7C0A0, 40 bytes long.
 Data: <&#224; &#199;&#230;x   p&#223;&#199;&#230;x   > E0 7F C7 E6 78 01 00 00 70 DF C7 E6 78 01 00 00 
{66} normal block at 0x00000178E6C776D0, 16 bytes long.
 Data: < &#234;C&#252;&#246;           > 80 EA 43 FC F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000178E6C77EF0, 16 bytes long.
 Data: <@&#233;C&#252;&#246;           > 40 E9 43 FC F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000178E6C77630, 16 bytes long.
 Data: <&#248;W@&#252;&#246;           > F8 57 40 FC F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000178E6C77B80, 16 bytes long.
 Data: <&#216;W@&#252;&#246;           > D8 57 40 FC F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000178E6C77D10, 16 bytes long.
 Data: <P @&#252;&#246;           > 50 04 40 FC F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000178E6C77B30, 16 bytes long.
 Data: <0 @&#252;&#246;           > 30 04 40 FC F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000178E6C77CC0, 16 bytes long.
 Data: <&#224; @&#252;&#246;           > E0 02 40 FC F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000178E6C774F0, 16 bytes long.
 Data: <  @&#252;&#246;           > 10 04 40 FC F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000178E6C77E50, 16 bytes long.
 Data: <p @&#252;&#246;           > 70 04 40 FC F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000178E6C77540, 16 bytes long.
 Data: < &#192;>&#252;&#246;           > 18 C0 3E FC F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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