Task 38675973

Name test_519-GPUGRID_TEST_ATM_40STEP_20261023-15-40-RND3095_0
Workunit 31617913
Created 26 Oct 2026, 9:53:05 UTC
Sent 26 Oct 2026, 9:53:11 UTC
Report deadline 31 Oct 2026, 9:53:11 UTC
Received 26 Oct 2026, 9:58:01 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 648120
Run time 2 min 57 sec
CPU time 1 min 37 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 48,740.91 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 728.26 MB
Peak swap size 13.00 GB
Peak disk usage 2.84 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<message>
Le syst�me d�exploitation ne peut pas ex�cuter (null).
 (0xc3) - exit code 195 (0xc3)</message>
<stderr_txt>
10:54:05 (43320): wrapper (7.9.26016): starting
10:54:05 (43320): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
10:54:06 (43320): Library/usr/bin/tar.exe exited; CPU time 0.000000
10:54:06 (43320): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\34\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\34\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Traceback (most recent call last):
  File "<frozen runpy>", line 198, in _run_module_as_main
  File "<frozen runpy>", line 88, in _run_code
  File "C:\ProgramData\BOINC\slots\34\Scripts\rbfe_production.exe\__main__.py", line 7, in <module>
  File "C:\ProgramData\BOINC\slots\34\Lib\site-packages\atom_openmm\rbfe_production.py", line 33, in rbfe_production
    rx.scheduleJobs()
  File "C:\ProgramData\BOINC\slots\34\Lib\site-packages\atom_openmm\async_re.py", line 321, in scheduleJobs
    self.transport.ProcessJobQueue(min_time,cycle_time)
  File "C:\ProgramData\BOINC\slots\34\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 186, in ProcessJobQueue
    self.isDone(repl,0)
  File "C:\ProgramData\BOINC\slots\34\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 287, in isDone
    retcode = self._update_replica(job)
              ^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\34\Lib\site-packages\atom_openmm\local_openmm_transport.py", line 212, in _update_replica
    pot = job['openmm_worker'].get_energy()
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\34\Lib\site-packages\atom_openmm\ommworker.py", line 451, in get_energy
    return self._worker_getenergy()
           ^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\34\Lib\site-packages\atom_openmm\ommworker.py", line 400, in _worker_getenergy
    state = self.simulation.context.getState(getEnergy = True)
            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\34\Lib\site-packages\openmm\openmm.py", line 5022, in getState
    state = _openmm.Context_getState(self, types, enforcePeriodicBox, groups_mask)
            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
openmm.OpenMMException: Particle coordinate is NaN.  For more information, see https://github.com/openmm/openmm/wiki/Frequently-Asked-Questions#nan
10:56:14 (43320): C:/Windows/system32/cmd.exe exited; CPU time 97.421875
10:56:14 (43320): app exit status: 0x16
10:56:14 (43320): called boinc_finish(195)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 3524911 bytes.
Dumping objects ->
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{3835596} normal block at 0x00000262D9D94A50, 48 bytes long.
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{3835585} normal block at 0x00000262D9D949E0, 48 bytes long.
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{291} normal block at 0x00000262D9D95E40, 16 bytes long.
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{289} normal block at 0x00000262D9D95BC0, 16 bytes long.
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{287} normal block at 0x00000262D9D96160, 16 bytes long.
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{282} normal block at 0x00000262D9D95FD0, 16 bytes long.
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{281} normal block at 0x00000262D9D95D00, 16 bytes long.
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{280} normal block at 0x00000262D9D8FAB0, 32 bytes long.
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{279} normal block at 0x00000262D9D954E0, 16 bytes long.
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{273} normal block at 0x00000262D9D8FFF0, 32 bytes long.
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{261} normal block at 0x00000262D9D8FCF0, 32 bytes long.
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{68} normal block at 0x00000262D9D8ED00, 16 bytes long.
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{67} normal block at 0x00000262D9D8ECB0, 16 bytes long.
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{66} normal block at 0x00000262D9D8F660, 16 bytes long.
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{65} normal block at 0x00000262D9D8F4D0, 16 bytes long.
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{64} normal block at 0x00000262D9D8F3E0, 16 bytes long.
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{63} normal block at 0x00000262D9D8EC60, 16 bytes long.
 Data: < &#192; &#200;&#246;           > 18 C0 81 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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