Task 38675679

Name test_462-GPUGRID_TEST_ATM_40STEP_20261023-14-40-RND2698_0
Workunit 31617641
Created 26 Oct 2026, 8:58:14 UTC
Sent 26 Oct 2026, 8:58:25 UTC
Report deadline 31 Oct 2026, 8:58:25 UTC
Received 26 Oct 2026, 9:20:22 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648120
Run time 21 min
CPU time 18 min 18 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 48,740.91 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 746.02 MB
Peak swap size 13.02 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
09:59:32 (42992): wrapper (7.9.26016): starting
09:59:32 (42992): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
09:59:33 (42992): Library/usr/bin/tar.exe exited; CPU time 0.000000
09:59:33 (42992): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\30\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\30\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
10:19:43 (42992): C:/Windows/system32/cmd.exe exited; CPU time 1098.625000
10:19:43 (42992): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 30762295 bytes.
Dumping objects ->
{3835618} normal block at 0x000002D12F0BDD50, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835607} normal block at 0x000002D12F0BDF10, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835596} normal block at 0x000002D12D2D4E40, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835585} normal block at 0x000002D12D2D4C80, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835574} normal block at 0x000002D12D2D4C10, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835543} normal block at 0x000002D12F106C00, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835532} normal block at 0x000002D12F11E310, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835529} normal block at 0x000002D12D2CF3E0, 8 bytes long.
 Data: <   -&#209;   > 00 00 7F 2D D1 02 00 00 
{3834721} normal block at 0x000002D12F11ED60, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x000002D12D2CF110, 8 bytes long.
 Data: < E /&#209;   > 90 45 16 2F D1 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000002D12D2D0D20, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002D12D2C6900, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000002D12D2D6020, 16 bytes long.
 Data: <8f--&#209;           > 38 66 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002D12D2D5AD0, 16 bytes long.
 Data: < f--&#209;           > 10 66 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002D12D2D0290, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000002D12D2D62A0, 16 bytes long.
 Data: <&#232;e--&#209;           > E8 65 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002D12D2D5530, 16 bytes long.
 Data: <&#192;e--&#209;           > C0 65 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002D12D2D5490, 16 bytes long.
 Data: < e--&#209;           > 98 65 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002D12D2D6070, 16 bytes long.
 Data: <pe--&#209;           > 70 65 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002D12D2D4BA0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000002D12D2D5710, 16 bytes long.
 Data: < &#181;+-&#209;           > 88 B5 2B 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002D12D2D0530, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000002D12D2D5440, 16 bytes long.
 Data: <`&#181;+-&#209;           > 60 B5 2B 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002D12D2D5FD0, 16 bytes long.
 Data: <8&#181;+-&#209;           > 38 B5 2B 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002D12D2D6200, 16 bytes long.
 Data: < &#181;+-&#209;           > 10 B5 2B 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002D12D2D5F80, 16 bytes long.
 Data: <&#232;&#180;+-&#209;           > E8 B4 2B 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002D12D2D5DA0, 16 bytes long.
 Data: <&#192;&#180;+-&#209;           > C0 B4 2B 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002D12D2D5D50, 16 bytes long.
 Data: < &#180;+-&#209;           > 98 B4 2B 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002D12D2CFCF0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000002D12D2D5D00, 16 bytes long.
 Data: <p&#180;+-&#209;           > 70 B4 2B 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002D12D2BB470, 320 bytes long.
 Data: < ]--&#209;   &#240;&#252;,-&#209;   > 00 5D 2D 2D D1 02 00 00 F0 FC 2C 2D D1 02 00 00 
{277} normal block at 0x000002D12D2D61B0, 16 bytes long.
 Data: <Pe--&#209;           > 50 65 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002D12D2D5CB0, 16 bytes long.
 Data: <(e--&#209;           > 28 65 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002D12D2D0110, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000002D12D2D5C60, 16 bytes long.
 Data: < e--&#209;           > 00 65 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002D12D2CFC90, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000002D12D2D5760, 16 bytes long.
 Data: <Hd--&#209;           > 48 64 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002D12D2D5B70, 16 bytes long.
 Data: < d--&#209;           > 20 64 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002D12D2D5EE0, 16 bytes long.
 Data: <&#248;c--&#209;           > F8 63 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002D12D2D5DF0, 16 bytes long.
 Data: <&#208;c--&#209;           > D0 63 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002D12D2D6110, 16 bytes long.
 Data: <&#168;c--&#209;           > A8 63 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002D12D2D6250, 16 bytes long.
 Data: < c--&#209;           > 80 63 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002D12D2D5F30, 16 bytes long.
 Data: < H--&#209;           > 20 48 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002D12D2D4820, 40 bytes long.
 Data: <0_--&#209;    l /&#209;   > 30 5F 2D 2D D1 02 00 00 00 6C 10 2F D1 02 00 00 
{263} normal block at 0x000002D12D2D58A0, 16 bytes long.
 Data: <`c--&#209;           > 60 63 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002D12D2D5E40, 16 bytes long.
 Data: <8c--&#209;           > 38 63 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002D12D2CFDB0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000002D12D2D5E90, 16 bytes long.
 Data: < c--&#209;           > 10 63 2D 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002D12D2D6310, 992 bytes long.
 Data: < ^--&#209;   &#176;&#253;,-&#209;   > 90 5E 2D 2D D1 02 00 00 B0 FD 2C 2D D1 02 00 00 
{95} normal block at 0x000002D12D2D0230, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000002D12D2CEDF0, 16 bytes long.
 Data: <p&#193;+-&#209;           > 70 C1 2B 2D D1 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000002D12D2BC170, 40 bytes long.
 Data: <&#240;&#237;,-&#209;   0 --&#209;   > F0 ED 2C 2D D1 02 00 00 30 02 2D 2D D1 02 00 00 
{72} normal block at 0x000002D12D2CF5C0, 16 bytes long.
 Data: < &#234;&#134;&#200;&#246;           > 80 EA 86 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002D12D2CF390, 16 bytes long.
 Data: <@&#233;&#134;&#200;&#246;           > 40 E9 86 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002D12D2CF020, 16 bytes long.
 Data: <&#248;W&#131;&#200;&#246;           > F8 57 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002D12D2CEEE0, 16 bytes long.
 Data: <&#216;W&#131;&#200;&#246;           > D8 57 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002D12D2CE940, 16 bytes long.
 Data: <P &#131;&#200;&#246;           > 50 04 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002D12D2CF200, 16 bytes long.
 Data: <0 &#131;&#200;&#246;           > 30 04 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002D12D2CF570, 16 bytes long.
 Data: <&#224; &#131;&#200;&#246;           > E0 02 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002D12D2CEF30, 16 bytes long.
 Data: <  &#131;&#200;&#246;           > 10 04 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002D12D2CE800, 16 bytes long.
 Data: <p &#131;&#200;&#246;           > 70 04 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002D12D2CEFD0, 16 bytes long.
 Data: < &#192; &#200;&#246;           > 18 C0 81 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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