Task 38674807

Name test_657-GPUGRID_TEST_ATM_40STEP_20261023-18-40-RND0005_1
Workunit 31616807
Created 26 Oct 2026, 6:23:11 UTC
Sent 26 Oct 2026, 6:23:17 UTC
Report deadline 31 Oct 2026, 6:23:17 UTC
Received 26 Oct 2026, 7:09:11 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 631341
Run time 30 min 49 sec
CPU time 29 min 39 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 29,149.23 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 731.51 MB
Peak swap size 14.45 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
07:39:36 (28628): wrapper (7.9.26016): starting
07:39:36 (28628): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
07:39:37 (28628): Library/usr/bin/tar.exe exited; CPU time 0.000000
07:39:37 (28628): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC_GPUGRID\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC_GPUGRID\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
08:08:51 (28628): C:/Windows/system32/cmd.exe exited; CPU time 1779.781250
08:08:51 (28628): called boinc_finish(0)
0 bytes in 0 Free Blocks.
632 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 24645157 bytes.
Dumping objects ->
{3835309} normal block at 0x000001B20465B140, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835298} normal block at 0x000001B202735620, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835287} normal block at 0x000001B202735150, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835276} normal block at 0x000001B202735690, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835265} normal block at 0x000001B202735380, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835234} normal block at 0x000001B20465B540, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835223} normal block at 0x000001B2046B6940, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835220} normal block at 0x000001B20272E0C0, 8 bytes long.
 Data: <  &#204;     > 00 00 CC 02 B2 01 00 00 
{3834594} normal block at 0x000001B2046B6760, 180 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000001B20272E020, 8 bytes long.
 Data: <@&#170;u     > 40 AA 75 02 B2 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001B2027319F0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001B202726800, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001B2027363B0, 16 bytes long.
 Data: <hos             > 68 6F 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001B202735FF0, 16 bytes long.
 Data: <@os             > 40 6F 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001B20272FB80, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001B202736810, 16 bytes long.
 Data: < os             > 18 6F 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001B202736630, 16 bytes long.
 Data: <&#240;ns             > F0 6E 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001B202736360, 16 bytes long.
 Data: <&#200;ns             > C8 6E 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001B202736BD0, 16 bytes long.
 Data: <&#160;ns             > A0 6E 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001B202735070, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001B202735FA0, 16 bytes long.
 Data: <(&#247;q             > 28 F7 71 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001B20272F880, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001B2027361D0, 16 bytes long.
 Data: < &#247;q             > 00 F7 71 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001B202736310, 16 bytes long.
 Data: <&#216;&#246;q             > D8 F6 71 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001B202735F00, 16 bytes long.
 Data: <&#176;&#246;q             > B0 F6 71 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001B202736AE0, 16 bytes long.
 Data: < &#246;q             > 88 F6 71 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001B202735EB0, 16 bytes long.
 Data: <`&#246;q             > 60 F6 71 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001B202735E10, 16 bytes long.
 Data: <8&#246;q             > 38 F6 71 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001B20272F760, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000001B202736450, 16 bytes long.
 Data: < &#246;q             > 10 F6 71 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001B20271F610, 320 bytes long.
 Data: <Pds     `&#247;r     > 50 64 73 02 B2 01 00 00 60 F7 72 02 B2 01 00 00 
{276} normal block at 0x000001B202735F50, 16 bytes long.
 Data: < ns             > 80 6E 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001B202735D20, 16 bytes long.
 Data: <Xns             > 58 6E 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001B202730180, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001B202736220, 16 bytes long.
 Data: <0ns             > 30 6E 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001B20272FCA0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001B202735DC0, 16 bytes long.
 Data: <xms             > 78 6D 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001B202736270, 16 bytes long.
 Data: <Pms             > 50 6D 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001B2027367C0, 16 bytes long.
 Data: <(ms             > 28 6D 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001B2027365E0, 16 bytes long.
 Data: < ms             > 00 6D 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001B2027362C0, 16 bytes long.
 Data: <&#216;ls             > D8 6C 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001B202736B80, 16 bytes long.
 Data: <&#176;ls             > B0 6C 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001B202735E60, 16 bytes long.
 Data: <&#192;Qs             > C0 51 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001B2027351C0, 40 bytes long.
 Data: <`^s     @&#181;e     > 60 5E 73 02 B2 01 00 00 40 B5 65 04 B2 01 00 00 
{262} normal block at 0x000001B202736180, 16 bytes long.
 Data: < ls             > 90 6C 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001B202736860, 16 bytes long.
 Data: <hls             > 68 6C 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001B20272FC40, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001B202735D70, 16 bytes long.
 Data: <@ls             > 40 6C 73 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001B202736C40, 992 bytes long.
 Data: <p]s     @&#252;r     > 70 5D 73 02 B2 01 00 00 40 FC 72 02 B2 01 00 00 
{94} normal block at 0x000001B20272FFA0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001B20272DC10, 16 bytes long.
 Data: <&#160;&#242;q             > A0 F2 71 02 B2 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001B20271F2A0, 40 bytes long.
 Data: < &#220;r     &#160; r     > 10 DC 72 02 B2 01 00 00 A0 FF 72 02 B2 01 00 00 
{71} normal block at 0x000001B20272D850, 16 bytes long.
 Data: < &#234;u4&#246;           > 80 EA 75 34 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001B20272E1B0, 16 bytes long.
 Data: <@&#233;u4&#246;           > 40 E9 75 34 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001B20272E390, 16 bytes long.
 Data: <&#248;Wr4&#246;           > F8 57 72 34 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001B20272E340, 16 bytes long.
 Data: <&#216;Wr4&#246;           > D8 57 72 34 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001B20272D990, 16 bytes long.
 Data: <P r4&#246;           > 50 04 72 34 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001B20272D8A0, 16 bytes long.
 Data: <0 r4&#246;           > 30 04 72 34 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001B20272DEE0, 16 bytes long.
 Data: <&#224; r4&#246;           > E0 02 72 34 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001B20272DB20, 16 bytes long.
 Data: <  r4&#246;           > 10 04 72 34 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001B20272E2A0, 16 bytes long.
 Data: <p r4&#246;           > 70 04 72 34 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001B20272DB70, 16 bytes long.
 Data: < &#192;p4&#246;           > 18 C0 70 34 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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