Task 38674311

Name test_11-GPUGRID_TEST_ATM_40STEP_20261023-19-40-RND4195_0
Workunit 31616355
Created 26 Oct 2026, 4:55:13 UTC
Sent 26 Oct 2026, 4:55:21 UTC
Report deadline 31 Oct 2026, 4:55:21 UTC
Received 26 Oct 2026, 7:03:21 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 645746
Run time 42 min 34 sec
CPU time 36 min 58 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 12,741.16 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 696.24 MB
Peak swap size 8.37 GB
Peak disk usage 3.92 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
02:21:39 (5008): wrapper (7.9.26016): starting
02:21:39 (5008): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
02:21:40 (5008): Library/usr/bin/tar.exe exited; CPU time 0.000000
02:21:40 (5008): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
03:02:52 (5008): C:/Windows/system32/cmd.exe exited; CPU time 2218.562500
03:02:52 (5008): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 41652523 bytes.
Dumping objects ->
{3835188} normal block at 0x0000000000614A30, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835177} normal block at 0x00000000006149C0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835166} normal block at 0x0000000000614950, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835155} normal block at 0x00000000006148E0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835144} normal block at 0x0000000000614870, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835113} normal block at 0x0000000002628D90, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835100} normal block at 0x000000000060FD00, 8 bytes long.
 Data: <  W     > 00 00 57 00 00 00 00 00 
{3833951} normal block at 0x0000000000610160, 8 bytes long.
 Data: <@&#162;c     > 40 A2 63 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x0000000000610D60, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000000000605FB0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x0000000000616610, 16 bytes long.
 Data: <XWa             > 58 57 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000000000616430, 16 bytes long.
 Data: <0Wa             > 30 57 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000000000060EF40, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x0000000000616340, 16 bytes long.
 Data: < Wa             > 08 57 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000000006160C0, 16 bytes long.
 Data: <&#224;Va             > E0 56 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000000006167F0, 16 bytes long.
 Data: <&#184;Va             > B8 56 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000000006167A0, 16 bytes long.
 Data: < Va             > 90 56 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000000000614C60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x0000000000615F30, 16 bytes long.
 Data: <(&#255;_             > 28 FF 5F 00 00 00 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000000000060F3C0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x0000000000615D50, 16 bytes long.
 Data: < &#255;_             > 00 FF 5F 00 00 00 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000000000616520, 16 bytes long.
 Data: <&#216;&#254;_             > D8 FE 5F 00 00 00 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000000006163E0, 16 bytes long.
 Data: <&#176;&#254;_             > B0 FE 5F 00 00 00 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000000000615EE0, 16 bytes long.
 Data: < &#254;_             > 88 FE 5F 00 00 00 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000000000616750, 16 bytes long.
 Data: <`&#254;_             > 60 FE 5F 00 00 00 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000000000616070, 16 bytes long.
 Data: <8&#254;_             > 38 FE 5F 00 00 00 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000000000060ED00, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x00000000006161B0, 16 bytes long.
 Data: < &#254;_             > 10 FE 5F 00 00 00 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000000005FFE10, 320 bytes long.
 Data: <&#176;aa      &#237;`     > B0 61 61 00 00 00 00 00 00 ED 60 00 00 00 00 00 
{271} normal block at 0x0000000000616390, 16 bytes long.
 Data: <pVa             > 70 56 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000000000615E90, 16 bytes long.
 Data: <HVa             > 48 56 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000000000060F420, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x0000000000615E40, 16 bytes long.
 Data: < Va             > 20 56 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000000000060F000, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x0000000000615CB0, 16 bytes long.
 Data: <hUa             > 68 55 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000000000616570, 16 bytes long.
 Data: <@Ua             > 40 55 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000000000616700, 16 bytes long.
 Data: < Ua             > 18 55 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000000000615DF0, 16 bytes long.
 Data: <&#240;Ta             > F0 54 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000000000060FDF0, 16 bytes long.
 Data: <&#200;Ta             > C8 54 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000000000060FA80, 16 bytes long.
 Data: <&#160;Ta             > A0 54 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000000000060F940, 16 bytes long.
 Data: <pOa             > 70 4F 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000000000614F70, 40 bytes long.
 Data: <@&#249;`       b     > 40 F9 60 00 00 00 00 00 90 8D 62 02 00 00 00 00 
{257} normal block at 0x000000000060FA30, 16 bytes long.
 Data: < Ta             > 80 54 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000000000060FCB0, 16 bytes long.
 Data: <XTa             > 58 54 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000000000060EE20, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x000000000060FD50, 16 bytes long.
 Data: <0Ta             > 30 54 61 00 00 00 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000000000615430, 992 bytes long.
 Data: <P&#253;`      &#238;`     > 50 FD 60 00 00 00 00 00 20 EE 60 00 00 00 00 00 
{89} normal block at 0x000000000060EFA0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x000000000060FDA0, 16 bytes long.
 Data: < &#199;_             > 10 C7 5F 00 00 00 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x00000000005FC710, 40 bytes long.
 Data: <&#160;&#253;`     &#160;&#239;`     > A0 FD 60 00 00 00 00 00 A0 EF 60 00 00 00 00 00 
{66} normal block at 0x000000000060FFD0, 16 bytes long.
 Data: < &#234;Wf&#247;           > 80 EA 57 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000000000610480, 16 bytes long.
 Data: <@&#233;Wf&#247;           > 40 E9 57 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000000000060FC60, 16 bytes long.
 Data: <&#248;WTf&#247;           > F8 57 54 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000000000060FF30, 16 bytes long.
 Data: <&#216;WTf&#247;           > D8 57 54 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000000000610070, 16 bytes long.
 Data: <P Tf&#247;           > 50 04 54 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000000000610250, 16 bytes long.
 Data: <0 Tf&#247;           > 30 04 54 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000000000060F7B0, 16 bytes long.
 Data: <&#224; Tf&#247;           > E0 02 54 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000000000060FE40, 16 bytes long.
 Data: <  Tf&#247;           > 10 04 54 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000000000610020, 16 bytes long.
 Data: <p Tf&#247;           > 70 04 54 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000000000610430, 16 bytes long.
 Data: < &#192;Rf&#247;           > 18 C0 52 66 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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