Task 38673982

Name test_145-GPUGRID_TEST_ATM_40STEP_20261023-22-40-RND7472_0
Workunit 31616036
Created 26 Oct 2026, 3:58:18 UTC
Sent 26 Oct 2026, 3:58:18 UTC
Report deadline 31 Oct 2026, 3:58:18 UTC
Received 26 Oct 2026, 6:57:32 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652544
Run time 44 min 54 sec
CPU time 42 min 2 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 17,076.26 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 714.86 MB
Peak swap size 12.91 GB
Peak disk usage 3.32 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
07:13:59 (64892): wrapper (7.9.26016): starting
07:13:59 (64892): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
07:14:01 (64892): Library/usr/bin/tar.exe exited; CPU time 0.015625
07:14:01 (64892): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\5\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\5\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
07:56:34 (64892): C:/Windows/system32/cmd.exe exited; CPU time 2522.718750
07:56:34 (64892): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 66164285 bytes.
Dumping objects ->
{3835258} normal block at 0x0000014E8F910BC0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835247} normal block at 0x0000014E8F910E60, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835236} normal block at 0x0000014E8F910A70, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835225} normal block at 0x0000014E8F910C30, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835214} normal block at 0x0000014E8F910920, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835183} normal block at 0x0000014E8F9DAF00, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835172} normal block at 0x0000014E8F9D1F80, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835169} normal block at 0x0000014E8DD263C0, 8 bytes long.
 Data: <  &#206; N   > 00 00 CE 8D 4E 01 00 00 
{3834553} normal block at 0x0000014E8F9D2870, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833947} normal block at 0x0000014E8DD26000, 8 bytes long.
 Data: <&#208; &#150; N   > D0 10 96 8F 4E 01 00 00 
..\zip\boinc_zip.cpp(122) : {305} normal block at 0x0000014E8DD305D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000014E8DD31510, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{289} normal block at 0x0000014E8DD31FC0, 16 bytes long.
 Data: <&#248;(&#211; N           > F8 28 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000014E8DD31D40, 16 bytes long.
 Data: <&#208;(&#211; N           > D0 28 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000014E8DD2CFF0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{286} normal block at 0x0000014E8DD32330, 16 bytes long.
 Data: <&#168;(&#211; N           > A8 28 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000014E8DD317A0, 16 bytes long.
 Data: < (&#211; N           > 80 28 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000014E8DD31930, 16 bytes long.
 Data: <X(&#211; N           > 58 28 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000014E8DD323D0, 16 bytes long.
 Data: <0(&#211; N           > 30 28 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000014E8DD2AE60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{281} normal block at 0x0000014E8DD32290, 16 bytes long.
 Data: <&#168; &#211; N           > A8 14 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000014E8DD2CB70, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{279} normal block at 0x0000014E8DD318E0, 16 bytes long.
 Data: <  &#211; N           > 80 14 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000014E8DD32240, 16 bytes long.
 Data: <X &#211; N           > 58 14 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000014E8DD31CF0, 16 bytes long.
 Data: <0 &#211; N           > 30 14 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000014E8DD317F0, 16 bytes long.
 Data: <  &#211; N           > 08 14 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000014E8DD31840, 16 bytes long.
 Data: <&#224; &#211; N           > E0 13 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000014E8DD32470, 16 bytes long.
 Data: <&#184; &#211; N           > B8 13 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000014E8DD2C270, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{271} normal block at 0x0000014E8DD32510, 16 bytes long.
 Data: <  &#211; N           > 90 13 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000014E8DD31390, 320 bytes long.
 Data: < %&#211; N   p&#194;&#210; N   > 10 25 D3 8D 4E 01 00 00 70 C2 D2 8D 4E 01 00 00 
{269} normal block at 0x0000014E8DD31CA0, 16 bytes long.
 Data: < (&#211; N           > 10 28 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000014E8DD31F70, 16 bytes long.
 Data: <&#232;'&#211; N           > E8 27 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000014E8DD2CF30, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{266} normal block at 0x0000014E8DD324C0, 16 bytes long.
 Data: <&#192;'&#211; N           > C0 27 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000014E8DD2C210, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{264} normal block at 0x0000014E8DD31AC0, 16 bytes long.
 Data: < '&#211; N           > 08 27 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000014E8DD31700, 16 bytes long.
 Data: <&#224;&&#211; N           > E0 26 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000014E8DD32150, 16 bytes long.
 Data: <&#184;&&#211; N           > B8 26 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000014E8DD32100, 16 bytes long.
 Data: < &&#211; N           > 90 26 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000014E8DD31F20, 16 bytes long.
 Data: <h&&#211; N           > 68 26 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000014E8DD31A70, 16 bytes long.
 Data: <@&&#211; N           > 40 26 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000014E8DD32380, 16 bytes long.
 Data: <P&#178;&#210; N           > 50 B2 D2 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000014E8DD2B250, 40 bytes long.
 Data: < #&#211; N    &#175;  N   > 80 23 D3 8D 4E 01 00 00 00 AF 9D 8F 4E 01 00 00 
{255} normal block at 0x0000014E8DD316B0, 16 bytes long.
 Data: < &&#211; N           > 20 26 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x0000014E8DD31660, 16 bytes long.
 Data: <&#248;%&#211; N           > F8 25 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000014E8DD2CED0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{252} normal block at 0x0000014E8DD31610, 16 bytes long.
 Data: <&#208;%&#211; N           > D0 25 D3 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x0000014E8DD325D0, 992 bytes long.
 Data: <  &#211; N   &#208;&#206;&#210; N   > 10 16 D3 8D 4E 01 00 00 D0 CE D2 8D 4E 01 00 00 
{87} normal block at 0x0000014E8DD2C4B0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{86} normal block at 0x0000014E8DD26730, 16 bytes long.
 Data: <p&#177;&#210; N           > 70 B1 D2 8D 4E 01 00 00 00 00 00 00 00 00 00 00 
{85} normal block at 0x0000014E8DD2B170, 40 bytes long.
 Data: <0g&#210; N   &#176;&#196;&#210; N   > 30 67 D2 8D 4E 01 00 00 B0 C4 D2 8D 4E 01 00 00 
{64} normal block at 0x0000014E8DD25E70, 16 bytes long.
 Data: < &#234; &#202;&#246;           > 80 EA 90 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000014E8DD26820, 16 bytes long.
 Data: <@&#233; &#202;&#246;           > 40 E9 90 CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000014E8DD261E0, 16 bytes long.
 Data: <&#248;W &#202;&#246;           > F8 57 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000014E8DD25FB0, 16 bytes long.
 Data: <&#216;W &#202;&#246;           > D8 57 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000014E8DD26B90, 16 bytes long.
 Data: <P  &#202;&#246;           > 50 04 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000014E8DD26410, 16 bytes long.
 Data: <0  &#202;&#246;           > 30 04 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000014E8DD26550, 16 bytes long.
 Data: <&#224;  &#202;&#246;           > E0 02 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000014E8DD25F60, 16 bytes long.
 Data: <   &#202;&#246;           > 10 04 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x0000014E8DD26690, 16 bytes long.
 Data: <p  &#202;&#246;           > 70 04 8D CA F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x0000014E8DD260F0, 16 bytes long.
 Data: < &#192;&#139;&#202;&#246;           > 18 C0 8B CA F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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