Task 38673431

Name test_818-GPUGRID_TEST_ATM_40STEP_20261023-25-40-RND3842_1
Workunit 31615492
Created 26 Oct 2026, 2:22:38 UTC
Sent 26 Oct 2026, 2:22:53 UTC
Report deadline 31 Oct 2026, 2:22:53 UTC
Received 26 Oct 2026, 5:34:41 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 637325
Run time 1 hours 7 min 18 sec
CPU time 1 hours 2 min 34 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 4,571.92 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 880.92 MB
Peak swap size 2.21 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
06:28:48 (3700): wrapper (7.9.26016): starting
06:28:48 (3700): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
06:28:50 (3700): Library/usr/bin/tar.exe exited; CPU time 0.000000
06:28:50 (3700): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
07:34:24 (3700): C:/Windows/system32/cmd.exe exited; CPU time 3754.265625
07:34:24 (3700): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 47024265 bytes.
Dumping objects ->
{3835194} normal block at 0x00000212FD930F40, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835183} normal block at 0x00000212FD930A70, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835172} normal block at 0x00000212FD9308B0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835161} normal block at 0x00000212FD931020, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835150} normal block at 0x00000212FD9316B0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835119} normal block at 0x00000212FDA23360, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835106} normal block at 0x00000212FBEE57E0, 8 bytes long.
 Data: <  &#232;&#251;    > 00 00 E8 FB 12 02 00 00 
{3833949} normal block at 0x00000212FBEE5CE0, 8 bytes long.
 Data: <  &#168;&#253;    > 90 1F A8 FD 12 02 00 00 
..\zip\boinc_zip.cpp(122) : {306} normal block at 0x00000212FBEF0C10, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000212FBED5CF0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{290} normal block at 0x00000212FBEF2010, 16 bytes long.
 Data: < -&#239;&#251;            > 08 2D EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000212FBEF1FC0, 16 bytes long.
 Data: <&#224;,&#239;&#251;            > E0 2C EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000212FBEEC050, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{287} normal block at 0x00000212FBEF23D0, 16 bytes long.
 Data: <&#184;,&#239;&#251;            > B8 2C EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000212FBEF1C50, 16 bytes long.
 Data: < ,&#239;&#251;            > 90 2C EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000212FBEF1ED0, 16 bytes long.
 Data: <h,&#239;&#251;            > 68 2C EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000212FBEF1E30, 16 bytes long.
 Data: <@,&#239;&#251;            > 40 2C EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000212FBEEA110, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{282} normal block at 0x00000212FBEF25B0, 16 bytes long.
 Data: < \&#237;&#251;            > 88 5C ED FB 12 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000212FBEEB810, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{280} normal block at 0x00000212FBEF1BB0, 16 bytes long.
 Data: <`\&#237;&#251;            > 60 5C ED FB 12 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000212FBEF1DE0, 16 bytes long.
 Data: <8\&#237;&#251;            > 38 5C ED FB 12 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000212FBEF1B60, 16 bytes long.
 Data: < \&#237;&#251;            > 10 5C ED FB 12 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000212FBEF1B10, 16 bytes long.
 Data: <&#232;[&#237;&#251;            > E8 5B ED FB 12 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000212FBEF1E80, 16 bytes long.
 Data: <&#192;[&#237;&#251;            > C0 5B ED FB 12 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000212FBEF2880, 16 bytes long.
 Data: < [&#237;&#251;            > 98 5B ED FB 12 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000212FBEEBBD0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{272} normal block at 0x00000212FBEF1F70, 16 bytes long.
 Data: <p[&#237;&#251;            > 70 5B ED FB 12 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000212FBED5B70, 320 bytes long.
 Data: <p &#239;&#251;    &#208;&#187;&#238;&#251;    > 70 1F EF FB 12 02 00 00 D0 BB EE FB 12 02 00 00 
{270} normal block at 0x00000212FBEF2290, 16 bytes long.
 Data: < ,&#239;&#251;            > 20 2C EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000212FBEF27E0, 16 bytes long.
 Data: <&#248;+&#239;&#251;            > F8 2B EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000212FBEEC470, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{267} normal block at 0x00000212FBEF1D90, 16 bytes long.
 Data: <&#208;+&#239;&#251;            > D0 2B EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000212FBEEBA50, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{265} normal block at 0x00000212FBEF1D40, 16 bytes long.
 Data: < +&#239;&#251;            > 18 2B EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000212FBEF26F0, 16 bytes long.
 Data: <&#240;*&#239;&#251;            > F0 2A EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000212FBEF24C0, 16 bytes long.
 Data: <&#200;*&#239;&#251;            > C8 2A EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000212FBEF2510, 16 bytes long.
 Data: <&#160;*&#239;&#251;            > A0 2A EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000212FBEF2650, 16 bytes long.
 Data: <x*&#239;&#251;            > 78 2A EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000212FBEF2560, 16 bytes long.
 Data: <P*&#239;&#251;            > 50 2A EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000212FBEF1CA0, 16 bytes long.
 Data: <p&#165;&#238;&#251;            > 70 A5 EE FB 12 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000212FBEEA570, 40 bytes long.
 Data: <&#160; &#239;&#251;    `3&#162;&#253;    > A0 1C EF FB 12 02 00 00 60 33 A2 FD 12 02 00 00 
{256} normal block at 0x00000212FBEF2100, 16 bytes long.
 Data: <0*&#239;&#251;            > 30 2A EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000212FBEF1AC0, 16 bytes long.
 Data: < *&#239;&#251;            > 08 2A EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x00000212FBEEBC30, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{253} normal block at 0x00000212FBEF1A70, 16 bytes long.
 Data: <&#224;)&#239;&#251;            > E0 29 EF FB 12 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x00000212FBEF29E0, 992 bytes long.
 Data: <p &#239;&#251;    0&#188;&#238;&#251;    > 70 1A EF FB 12 02 00 00 30 BC EE FB 12 02 00 00 
{88} normal block at 0x00000212FBEEB990, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{87} normal block at 0x00000212FBEE6280, 16 bytes long.
 Data: < &#164;&#238;&#251;            > 90 A4 EE FB 12 02 00 00 00 00 00 00 00 00 00 00 
{86} normal block at 0x00000212FBEEA490, 40 bytes long.
 Data: < b&#238;&#251;     &#185;&#238;&#251;    > 80 62 EE FB 12 02 00 00 90 B9 EE FB 12 02 00 00 
{65} normal block at 0x00000212FBEE5C90, 16 bytes long.
 Data: < &#234;&#192;j&#247;           > 80 EA C0 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000212FBEE6000, 16 bytes long.
 Data: <@&#233;&#192;j&#247;           > 40 E9 C0 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000212FBEE5830, 16 bytes long.
 Data: <&#248;W&#189;j&#247;           > F8 57 BD 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000212FBEE62D0, 16 bytes long.
 Data: <&#216;W&#189;j&#247;           > D8 57 BD 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000212FBEE61E0, 16 bytes long.
 Data: <P &#189;j&#247;           > 50 04 BD 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000212FBEE5A10, 16 bytes long.
 Data: <0 &#189;j&#247;           > 30 04 BD 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000212FBEE5FB0, 16 bytes long.
 Data: <&#224; &#189;j&#247;           > E0 02 BD 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000212FBEE6140, 16 bytes long.
 Data: <  &#189;j&#247;           > 10 04 BD 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000212FBEE5F10, 16 bytes long.
 Data: <p &#189;j&#247;           > 70 04 BD 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x00000212FBEE5970, 16 bytes long.
 Data: < &#192;&#187;j&#247;           > 18 C0 BB 6A F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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