Task 38673258

Name test_61-GPUGRID_TEST_ATM_40STEP_20261023-27-40-RND2879_0
Workunit 31615351
Created 26 Oct 2026, 2:00:08 UTC
Sent 26 Oct 2026, 2:00:11 UTC
Report deadline 31 Oct 2026, 2:00:11 UTC
Received 26 Oct 2026, 8:29:13 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 644440
Run time 59 min 22 sec
CPU time 59 min 22 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 8,090.66 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 744.46 MB
Peak swap size 12.90 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
03:28:38 (78144): wrapper (7.9.26016): starting
03:28:38 (78144): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
03:28:39 (78144): Library/usr/bin/tar.exe exited; CPU time 0.015625
03:28:39 (78144): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
04:28:32 (78144): C:/Windows/system32/cmd.exe exited; CPU time 3562.703125
04:28:32 (78144): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 102339859 bytes.
Dumping objects ->
{3835512} normal block at 0x000001EBB04911E0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835501} normal block at 0x000001EBAE877FF0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835490} normal block at 0x000001EBAE878610, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835479} normal block at 0x000001EBAE878140, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835468} normal block at 0x000001EBAE8786F0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835437} normal block at 0x000001EBB04DABE0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835424} normal block at 0x000001EBAE8700E0, 8 bytes long.
 Data: <  &#196;&#174;&#235;   > 00 00 C4 AE EB 01 00 00 
{3833965} normal block at 0x000001EBAE86FAF0, 8 bytes long.
 Data: < &#220;N&#176;&#235;   > 00 DC 4E B0 EB 01 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x000001EBAE867740, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000001EBAE868720, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x000001EBAE878EE0, 16 bytes long.
 Data: <&#232;&#154;&#135;&#174;&#235;           > E8 9A 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001EBAE8788A0, 16 bytes long.
 Data: <&#192;&#154;&#135;&#174;&#235;           > C0 9A 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001EBAE872960, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x000001EBAE879250, 16 bytes long.
 Data: < &#154;&#135;&#174;&#235;           > 98 9A 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001EBAE878AD0, 16 bytes long.
 Data: <p&#154;&#135;&#174;&#235;           > 70 9A 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001EBAE8792A0, 16 bytes long.
 Data: <H&#154;&#135;&#174;&#235;           > 48 9A 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001EBAE878E40, 16 bytes long.
 Data: < &#154;&#135;&#174;&#235;           > 20 9A 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001EBAE878530, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x000001EBAE879430, 16 bytes long.
 Data: <X&#196;&#133;&#174;&#235;           > 58 C4 85 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001EBAE8728A0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x000001EBAE879200, 16 bytes long.
 Data: <0&#196;&#133;&#174;&#235;           > 30 C4 85 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001EBAE879160, 16 bytes long.
 Data: < &#196;&#133;&#174;&#235;           > 08 C4 85 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001EBAE878B20, 16 bytes long.
 Data: <&#224;&#195;&#133;&#174;&#235;           > E0 C3 85 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001EBAE878DF0, 16 bytes long.
 Data: <&#184;&#195;&#133;&#174;&#235;           > B8 C3 85 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001EBAE879110, 16 bytes long.
 Data: < &#195;&#133;&#174;&#235;           > 90 C3 85 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001EBAE878D00, 16 bytes long.
 Data: <h&#195;&#133;&#174;&#235;           > 68 C3 85 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001EBAE872060, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x000001EBAE879750, 16 bytes long.
 Data: <@&#195;&#133;&#174;&#235;           > 40 C3 85 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001EBAE85C340, 320 bytes long.
 Data: <P&#151;&#135;&#174;&#235;   ` &#135;&#174;&#235;   > 50 97 87 AE EB 01 00 00 60 20 87 AE EB 01 00 00 
{278} normal block at 0x000001EBAE878DA0, 16 bytes long.
 Data: < &#154;&#135;&#174;&#235;           > 00 9A 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001EBAE879660, 16 bytes long.
 Data: <&#216; &#135;&#174;&#235;           > D8 99 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001EBAE8724E0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x000001EBAE878D50, 16 bytes long.
 Data: <&#176; &#135;&#174;&#235;           > B0 99 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001EBAE872240, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x000001EBAE878E90, 16 bytes long.
 Data: <&#248; &#135;&#174;&#235;           > F8 98 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001EBAE878CB0, 16 bytes long.
 Data: <&#208; &#135;&#174;&#235;           > D0 98 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001EBAE879610, 16 bytes long.
 Data: <&#168; &#135;&#174;&#235;           > A8 98 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001EBAE8791B0, 16 bytes long.
 Data: <  &#135;&#174;&#235;           > 80 98 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001EBAE878C60, 16 bytes long.
 Data: <X &#135;&#174;&#235;           > 58 98 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001EBAE879570, 16 bytes long.
 Data: <0 &#135;&#174;&#235;           > 30 98 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001EBAE879390, 16 bytes long.
 Data: <P&#132;&#135;&#174;&#235;           > 50 84 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001EBAE878450, 40 bytes long.
 Data: < &#147;&#135;&#174;&#235;   &#224;&#171;M&#176;&#235;   > 90 93 87 AE EB 01 00 00 E0 AB 4D B0 EB 01 00 00 
{264} normal block at 0x000001EBAE878A80, 16 bytes long.
 Data: <  &#135;&#174;&#235;           > 10 98 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001EBAE878850, 16 bytes long.
 Data: <&#232;&#151;&#135;&#174;&#235;           > E8 97 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001EBAE871E80, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x000001EBAE878800, 16 bytes long.
 Data: <&#192;&#151;&#135;&#174;&#235;           > C0 97 87 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001EBAE8797C0, 992 bytes long.
 Data: <  &#135;&#174;&#235;     &#135;&#174;&#235;   > 00 88 87 AE EB 01 00 00 80 1E 87 AE EB 01 00 00 
{96} normal block at 0x000001EBAE8729C0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x000001EBAE870400, 16 bytes long.
 Data: <&#176;&#208;&#133;&#174;&#235;           > B0 D0 85 AE EB 01 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x000001EBAE85D0B0, 40 bytes long.
 Data: <  &#135;&#174;&#235;   &#192;)&#135;&#174;&#235;   > 00 04 87 AE EB 01 00 00 C0 29 87 AE EB 01 00 00 
{73} normal block at 0x000001EBAE86FE60, 16 bytes long.
 Data: < &#234;S&#134;&#246;           > 80 EA 53 86 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001EBAE870860, 16 bytes long.
 Data: <@&#233;S&#134;&#246;           > 40 E9 53 86 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001EBAE870810, 16 bytes long.
 Data: <&#248;WP&#134;&#246;           > F8 57 50 86 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001EBAE86F9B0, 16 bytes long.
 Data: <&#216;WP&#134;&#246;           > D8 57 50 86 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001EBAE86FFF0, 16 bytes long.
 Data: <P P&#134;&#246;           > 50 04 50 86 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001EBAE870360, 16 bytes long.
 Data: <0 P&#134;&#246;           > 30 04 50 86 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001EBAE86FAA0, 16 bytes long.
 Data: <&#224; P&#134;&#246;           > E0 02 50 86 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001EBAE86FE10, 16 bytes long.
 Data: <  P&#134;&#246;           > 10 04 50 86 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001EBAE86FA50, 16 bytes long.
 Data: <p P&#134;&#246;           > 70 04 50 86 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001EBAE870720, 16 bytes long.
 Data: < &#192;N&#134;&#246;           > 18 C0 4E 86 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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