Task 38672736

Name test_14-GPUGRID_TEST_ATM_40STEP_20261023-20-40-RND4642_0
Workunit 31614858
Created 26 Oct 2026, 0:18:36 UTC
Sent 26 Oct 2026, 0:18:37 UTC
Report deadline 31 Oct 2026, 0:18:37 UTC
Received 26 Oct 2026, 0:48:20 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 638240
Run time 19 min 2 sec
CPU time 16 min 12 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 15,210.02 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 684.17 MB
Peak swap size 12.89 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<message>
The operating system cannot run (null).
 (0xc3) - exit code 195 (0xc3)</message>
<stderr_txt>
17:26:59 (7780): wrapper (7.9.26016): starting
17:26:59 (7780): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:27:03 (7780): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:27:03 (7780): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
17:46:16 (2424): wrapper (7.9.26016): starting
17:46:16 (2424): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\4\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Traceback (most recent call last):
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\atom_openmm\openmm_async_re.py", line 432, in __init__
    replica = OMMReplicaATM(i, self.basename, self.service_worker, self.logger, self.keywords)
              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\atom_openmm\ommreplica.py", line 41, in __init__
    self.load_checkpoint()
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\atom_openmm\ommreplica.py", line 79, in load_checkpoint
    self.worker.simulation.loadState(ckptfile)
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\openmm\app\simulation.py", line 363, in loadState
    self.context.setState(mm.XmlSerializer.deserialize(xml))
                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\openmm\openmm.py", line 19618, in deserialize
    raise ValueError("Invalid input string")
ValueError: Invalid input string

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "<frozen runpy>", line 198, in _run_module_as_main
  File "<frozen runpy>", line 88, in _run_code
  File "C:\ProgramData\BOINC\slots\4\Scripts\rbfe_production.exe\__main__.py", line 7, in <module>
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\atom_openmm\rbfe_production.py", line 29, in rbfe_production
    rx = openmm_job_RBFE(
         ^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\atom_openmm\openmm_async_re.py", line 434, in __init__
    self._exit("Error when creating replica.")
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\atom_openmm\async_re.py", line 69, in _exit
    self.checkpointJob()
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\atom_openmm\openmm_async_re.py", line 48, in checkpointJob
    self.update_state_of_replica(repl)
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\atom_openmm\openmm_async_re.py", line 86, in update_state_of_replica
    stateid = self.status[repl]['stateid_current']
              ^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\4\Lib\site-packages\atom_openmm\async_re.py", line 131, in __getattribute__
    return object.__getattribute__(self,name)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
AttributeError: 'openmm_job_RBFE' object has no attribute 'status'
17:47:12 (2424): C:/Windows/system32/cmd.exe exited; CPU time 40.890625
17:47:12 (2424): app exit status: 0x16
17:47:12 (2424): called boinc_finish(195)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 561826 bytes.
Dumping objects ->
{1901} normal block at 0x000001818D618450, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1890} normal block at 0x000001818D618530, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1879} normal block at 0x000001818D618610, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{1868} normal block at 0x000001818D6185A0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1857} normal block at 0x000001818D618370, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{1826} normal block at 0x000001818D604410, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1815} normal block at 0x000001818D602D40, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {1812} normal block at 0x000001818D619190, 8 bytes long.
 Data: <  [     > 00 00 5B 8D 81 01 00 00 
{1031} normal block at 0x000001818D603D10, 102 bytes long.
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{303} normal block at 0x000001818D618D30, 8 bytes long.
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{294} normal block at 0x000001818D605C80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x000001818D619B90, 16 bytes long.
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{292} normal block at 0x000001818D618CE0, 16 bytes long.
 Data: <  a             > A0 9F 61 8D 81 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001818D614E50, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x000001818D618F60, 16 bytes long.
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{289} normal block at 0x000001818D619B40, 16 bytes long.
 Data: <P a             > 50 9F 61 8D 81 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001818D619AA0, 16 bytes long.
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{287} normal block at 0x000001818D618DD0, 16 bytes long.
 Data: <  a             > 00 9F 61 8D 81 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001818D618300, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x000001818D619640, 16 bytes long.
 Data: < O`             > B8 4F 60 8D 81 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001818D614A30, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x000001818D6195A0, 16 bytes long.
 Data: < O`             > 90 4F 60 8D 81 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001818D619C30, 16 bytes long.
 Data: <hO`             > 68 4F 60 8D 81 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001818D619550, 16 bytes long.
 Data: <@O`             > 40 4F 60 8D 81 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001818D619A50, 16 bytes long.
 Data: < O`             > 18 4F 60 8D 81 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001818D618E20, 16 bytes long.
 Data: < N`             > F0 4E 60 8D 81 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001818D6199B0, 16 bytes long.
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{276} normal block at 0x000001818D614C10, 32 bytes long.
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{275} normal block at 0x000001818D619690, 16 bytes long.
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{274} normal block at 0x000001818D604EA0, 320 bytes long.
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{273} normal block at 0x000001818D6192D0, 16 bytes long.
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{272} normal block at 0x000001818D618D80, 16 bytes long.
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{271} normal block at 0x000001818D614FD0, 32 bytes long.
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{270} normal block at 0x000001818D6196E0, 16 bytes long.
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{269} normal block at 0x000001818D6149D0, 32 bytes long.
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{268} normal block at 0x000001818D619A00, 16 bytes long.
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{267} normal block at 0x000001818D619AF0, 16 bytes long.
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{266} normal block at 0x000001818D619960, 16 bytes long.
 Data: <  a             > 88 9D 61 8D 81 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001818D6190A0, 16 bytes long.
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{264} normal block at 0x000001818D619910, 16 bytes long.
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{263} normal block at 0x000001818D6198C0, 16 bytes long.
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{261} normal block at 0x000001818D619870, 16 bytes long.
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{260} normal block at 0x000001818D6184C0, 40 bytes long.
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{259} normal block at 0x000001818D618F10, 16 bytes long.
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{258} normal block at 0x000001818D6195F0, 16 bytes long.
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{257} normal block at 0x000001818D614BB0, 32 bytes long.
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{256} normal block at 0x000001818D619BE0, 16 bytes long.
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{255} normal block at 0x000001818D619CA0, 992 bytes long.
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{91} normal block at 0x000001818D614190, 32 bytes long.
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{90} normal block at 0x000001818D60F8A0, 16 bytes long.
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{89} normal block at 0x000001818D6183E0, 40 bytes long.
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{68} normal block at 0x000001818D60F620, 16 bytes long.
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{67} normal block at 0x000001818D60F8F0, 16 bytes long.
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{66} normal block at 0x000001818D60F260, 16 bytes long.
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{65} normal block at 0x000001818D60EF90, 16 bytes long.
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{64} normal block at 0x000001818D60EC20, 16 bytes long.
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{63} normal block at 0x000001818D60FA30, 16 bytes long.
 Data: <0               > 30 04 FC 84 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001818D60F760, 16 bytes long.
 Data: <                > E0 02 FC 84 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001818D60F4E0, 16 bytes long.
 Data: <                > 10 04 FC 84 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001818D60F1C0, 16 bytes long.
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{59} normal block at 0x000001818D60F5D0, 16 bytes long.
 Data: <                > 18 C0 FA 84 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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