Task 38672303

Name test_556-GPUGRID_TEST_ATM_40STEP_20261023-24-40-RND0069_0
Workunit 31614457
Created 25 Oct 2026, 23:02:05 UTC
Sent 25 Oct 2026, 23:02:11 UTC
Report deadline 30 Oct 2026, 23:02:11 UTC
Received 26 Oct 2026, 11:27:54 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 610797
Run time 18 min 16 sec
CPU time 16 min 44 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 56,774.19 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 736.87 MB
Peak swap size 13.05 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.15</core_client_version>
<![CDATA[
<stderr_txt>
12:06:07 (5468): wrapper (7.9.26016): starting
12:06:07 (5468): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
12:06:08 (5468): Library/usr/bin/tar.exe exited; CPU time 0.000000
12:06:08 (5468): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\DataBOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\DataBOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835521} normal block at 0x0000021760751CF0, 8 bytes long.
 Data: <  o`    > 00 00 6F 60 17 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3833960} normal block at 0x0000021762646630, 1080 bytes long.
 Data: < b      X       > 94 62 00 00 CD CD CD CD 58 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000002176074F4F0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
12:10:30 (11644): wrapper (7.9.26016): starting
12:10:30 (11644): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
Ein Unterverzeichnis oder eine Datei mit dem Namen "C:\DataBOINC\slots\0\tmp" existiert bereits.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
12:27:26 (11644): C:/Windows/system32/cmd.exe exited; CPU time 970.281250
12:27:26 (11644): called boinc_finish(0)
0 bytes in 0 Free Blocks.
380 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 18634896 bytes.
Dumping objects ->
{1955} normal block at 0x00000227C67A50E0, 48 bytes long.
 Data: <PATH=C:\DataBOIN> 50 41 54 48 3D 43 3A 5C 44 61 74 61 42 4F 49 4E 
{1944} normal block at 0x00000227C679F940, 32 bytes long.
 Data: <HOME=C:\DataBOIN> 48 4F 4D 45 3D 43 3A 5C 44 61 74 61 42 4F 49 4E 
{1933} normal block at 0x00000227C67A0360, 32 bytes long.
 Data: <TMP=C:\DataBOINC> 54 4D 50 3D 43 3A 5C 44 61 74 61 42 4F 49 4E 43 
{1922} normal block at 0x00000227C679FE20, 32 bytes long.
 Data: <TEMP=C:\DataBOIN> 54 45 4D 50 3D 43 3A 5C 44 61 74 61 42 4F 49 4E 
{1911} normal block at 0x00000227C679FDC0, 32 bytes long.
 Data: <TMPDIR=C:\DataBO> 54 4D 50 44 49 52 3D 43 3A 5C 44 61 74 61 42 4F 
{1880} normal block at 0x00000227C67A5690, 48 bytes long.
 Data: <PATH=C:\DataBOIN> 50 41 54 48 3D 43 3A 5C 44 61 74 61 42 4F 49 4E 
{1869} normal block at 0x00000227C678C5E0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {1866} normal block at 0x00000227C67A6590, 8 bytes long.
 Data: <    '   > 00 00 D8 C6 27 02 00 00 
{1060} normal block at 0x00000227C678B8C0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{306} normal block at 0x00000227C67A5FA0, 8 bytes long.
 Data: <`pz '   > 60 70 7A C6 27 02 00 00 
{297} normal block at 0x00000227C6797100, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x00000227C67A6900, 16 bytes long.
 Data: <hoz '           > 68 6F 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000227C67A68B0, 16 bytes long.
 Data: <@oz '           > 40 6F 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000227C679F640, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x00000227C67A6B80, 16 bytes long.
 Data: < oz '           > 18 6F 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000227C67A6220, 16 bytes long.
 Data: < nz '           > F0 6E 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000227C67A6B30, 16 bytes long.
 Data: < nz '           > C8 6E 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000227C67A6810, 16 bytes long.
 Data: < nz '           > A0 6E 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000227C67A52A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x00000227C67A5E10, 16 bytes long.
 Data: <  x '           > 98 F7 78 C6 27 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000227C679F5E0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x00000227C67A6180, 16 bytes long.
 Data: <p x '           > 70 F7 78 C6 27 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000227C67A60E0, 16 bytes long.
 Data: <H x '           > 48 F7 78 C6 27 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000227C67A5EB0, 16 bytes long.
 Data: <  x '           > 20 F7 78 C6 27 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000227C67A6090, 16 bytes long.
 Data: <  x '           > F8 F6 78 C6 27 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000227C67A6680, 16 bytes long.
 Data: <  x '           > D0 F6 78 C6 27 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000227C67A6040, 16 bytes long.
 Data: <  x '           > A8 F6 78 C6 27 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000227C679FB20, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x00000227C67A67C0, 16 bytes long.
 Data: <  x '           > 80 F6 78 C6 27 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000227C678F680, 320 bytes long.
 Data: < gz '     y '   > C0 67 7A C6 27 02 00 00 20 FB 79 C6 27 02 00 00 
{276} normal block at 0x00000227C67A5D70, 16 bytes long.
 Data: < nz '           > 80 6E 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000227C67A5FF0, 16 bytes long.
 Data: <Xnz '           > 58 6E 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000227C67A02A0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x00000227C67A6450, 16 bytes long.
 Data: <0nz '           > 30 6E 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000227C679F8E0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x00000227C67A6630, 16 bytes long.
 Data: <xmz '           > 78 6D 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000227C67A6360, 16 bytes long.
 Data: <Pmz '           > 50 6D 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000227C67A64F0, 16 bytes long.
 Data: <(mz '           > 28 6D 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000227C67A6AE0, 16 bytes long.
 Data: < mz '           > 00 6D 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000227C67A5CD0, 16 bytes long.
 Data: < lz '           > D8 6C 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000227C67A5E60, 16 bytes long.
 Data: < lz '           > B0 6C 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000227C67A6860, 16 bytes long.
 Data: <@Uz '           > 40 55 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000227C67A5540, 40 bytes long.
 Data: <`hz '    Vz '   > 60 68 7A C6 27 02 00 00 90 56 7A C6 27 02 00 00 
{262} normal block at 0x00000227C67A6540, 16 bytes long.
 Data: < lz '           > 90 6C 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000227C67A6130, 16 bytes long.
 Data: <hlz '           > 68 6C 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000227C679FE80, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x00000227C67A6BD0, 16 bytes long.
 Data: <@lz '           > 40 6C 7A C6 27 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000227C67A6C40, 992 bytes long.
 Data: < kz '     y '   > D0 6B 7A C6 27 02 00 00 80 FE 79 C6 27 02 00 00 
{94} normal block at 0x00000227C67A0060, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x00000227C679DD50, 16 bytes long.
 Data: <0 x '           > 30 EA 78 C6 27 02 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x00000227C678EA30, 40 bytes long.
 Data: <P y '   ` z '   > 50 DD 79 C6 27 02 00 00 60 00 7A C6 27 02 00 00 
{71} normal block at 0x00000227C679DC60, 16 bytes long.
 Data: <  !Q            > 80 EA 21 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000227C679DEE0, 16 bytes long.
 Data: <@ !Q            > 40 E9 21 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000227C679D710, 16 bytes long.
 Data: < W Q            > F8 57 1E 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000227C679DBC0, 16 bytes long.
 Data: < W Q            > D8 57 1E 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000227C679DD00, 16 bytes long.
 Data: <P  Q            > 50 04 1E 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000227C679E390, 16 bytes long.
 Data: <0  Q            > 30 04 1E 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000227C679DC10, 16 bytes long.
 Data: <   Q            > E0 02 1E 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000227C679E520, 16 bytes long.
 Data: <   Q            > 10 04 1E 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000227C679E2F0, 16 bytes long.
 Data: <p  Q            > 70 04 1E 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000227C679E3E0, 16 bytes long.
 Data: <   Q            > 18 C0 1C 51 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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