Task 38671844

Name test_944-GPUGRID_TEST_ATM_40STEP_20261023-21-40-RND6254_0
Workunit 31614029
Created 25 Oct 2026, 21:44:30 UTC
Sent 25 Oct 2026, 21:44:35 UTC
Report deadline 30 Oct 2026, 21:44:35 UTC
Received 25 Oct 2026, 23:37:42 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654147
Run time 35 min 2 sec
CPU time 31 min 45 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 7,069.21 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 668.40 MB
Peak swap size 5.26 GB
Peak disk usage 3.62 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
00:00:57 (7272): wrapper (7.9.26016): starting
00:00:57 (7272): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
00:00:59 (7272): Library/usr/bin/tar.exe exited; CPU time 1.437500
00:00:59 (7272): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
00:34:43 (7272): C:/Windows/system32/cmd.exe exited; CPU time 1904.359375
00:34:43 (7272): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 33018023 bytes.
Dumping objects ->
{3835197} normal block at 0x0000022843BEC6C0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835186} normal block at 0x0000022843BECC70, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835175} normal block at 0x0000022843B94630, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835164} normal block at 0x0000022843B94B70, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835153} normal block at 0x0000022843B94B00, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835122} normal block at 0x0000022845867080, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835109} normal block at 0x0000022843B8F4D0, 8 bytes long.
 Data: <  &#248;C(   > 00 00 F8 43 28 02 00 00 
{3833959} normal block at 0x0000022843B902E0, 8 bytes long.
 Data: < d&#140;E(   > 20 64 8C 45 28 02 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x0000022843B8EB00, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000022843B85EB0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x0000022843B95140, 16 bytes long.
 Data: <&#216;c&#185;C(           > D8 63 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000022843B95A50, 16 bytes long.
 Data: <&#176;c&#185;C(           > B0 63 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000022843B90E40, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x0000022843B95870, 16 bytes long.
 Data: < c&#185;C(           > 88 63 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000022843B955F0, 16 bytes long.
 Data: <`c&#185;C(           > 60 63 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000022843B95460, 16 bytes long.
 Data: <8c&#185;C(           > 38 63 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000022843B95370, 16 bytes long.
 Data: < c&#185;C(           > 10 63 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000022843B94710, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x0000022843B95D70, 16 bytes long.
 Data: <  &#184;C(           > 88 8D B8 43 28 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000022843B911A0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x0000022843B95F50, 16 bytes long.
 Data: <` &#184;C(           > 60 8D B8 43 28 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000022843B95190, 16 bytes long.
 Data: <8 &#184;C(           > 38 8D B8 43 28 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000022843B951E0, 16 bytes long.
 Data: <  &#184;C(           > 10 8D B8 43 28 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000022843B953C0, 16 bytes long.
 Data: <&#232;&#140;&#184;C(           > E8 8C B8 43 28 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000022843B955A0, 16 bytes long.
 Data: <&#192;&#140;&#184;C(           > C0 8C B8 43 28 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000022843B95640, 16 bytes long.
 Data: < &#140;&#184;C(           > 98 8C B8 43 28 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000022843B91020, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x0000022843B95F00, 16 bytes long.
 Data: <p&#140;&#184;C(           > 70 8C B8 43 28 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000022843B88C70, 320 bytes long.
 Data: < _&#185;C(     &#185;C(   > 00 5F B9 43 28 02 00 00 20 10 B9 43 28 02 00 00 
{275} normal block at 0x0000022843B95730, 16 bytes long.
 Data: <&#240;b&#185;C(           > F0 62 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000022843B956E0, 16 bytes long.
 Data: <&#200;b&#185;C(           > C8 62 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000022843B90C60, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x0000022843B95320, 16 bytes long.
 Data: <&#160;b&#185;C(           > A0 62 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000022843B90F00, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x0000022843B95BE0, 16 bytes long.
 Data: <&#232;a&#185;C(           > E8 61 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000022843B95280, 16 bytes long.
 Data: <&#192;a&#185;C(           > C0 61 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000022843B95FA0, 16 bytes long.
 Data: < a&#185;C(           > 98 61 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000022843B95B40, 16 bytes long.
 Data: <pa&#185;C(           > 70 61 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000022843B95FF0, 16 bytes long.
 Data: <Ha&#185;C(           > 48 61 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000022843B95EB0, 16 bytes long.
 Data: < a&#185;C(           > 20 61 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000022843B95690, 16 bytes long.
 Data: < J&#185;C(           > 20 4A B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000022843B94A20, 40 bytes long.
 Data: < V&#185;C(    p&#134;E(   > 90 56 B9 43 28 02 00 00 80 70 86 45 28 02 00 00 
{261} normal block at 0x0000022843B95960, 16 bytes long.
 Data: < a&#185;C(           > 00 61 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000022843B95550, 16 bytes long.
 Data: <&#216;`&#185;C(           > D8 60 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000022843B90900, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x0000022843B95C80, 16 bytes long.
 Data: <&#176;`&#185;C(           > B0 60 B9 43 28 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000022843B960B0, 992 bytes long.
 Data: < \&#185;C(    	&#185;C(   > 80 5C B9 43 28 02 00 00 00 09 B9 43 28 02 00 00 
{93} normal block at 0x0000022843B90DE0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x0000022843B8FD40, 16 bytes long.
 Data: <&#224;&#228;&#183;C(           > E0 E4 B7 43 28 02 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x0000022843B7E4E0, 40 bytes long.
 Data: <@&#253;&#184;C(   &#224; &#185;C(   > 40 FD B8 43 28 02 00 00 E0 0D B9 43 28 02 00 00 
{70} normal block at 0x0000022843B8F5C0, 16 bytes long.
 Data: < &#234;&#198;b&#247;           > 80 EA C6 62 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000022843B8FCA0, 16 bytes long.
 Data: <@&#233;&#198;b&#247;           > 40 E9 C6 62 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000022843B8F890, 16 bytes long.
 Data: <&#248;W&#195;b&#247;           > F8 57 C3 62 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000022843B901F0, 16 bytes long.
 Data: <&#216;W&#195;b&#247;           > D8 57 C3 62 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000022843B8F840, 16 bytes long.
 Data: <P &#195;b&#247;           > 50 04 C3 62 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000022843B8FDE0, 16 bytes long.
 Data: <0 &#195;b&#247;           > 30 04 C3 62 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000022843B90150, 16 bytes long.
 Data: <&#224; &#195;b&#247;           > E0 02 C3 62 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000022843B90100, 16 bytes long.
 Data: <  &#195;b&#247;           > 10 04 C3 62 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000022843B8FB10, 16 bytes long.
 Data: <p &#195;b&#247;           > 70 04 C3 62 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000022843B8F520, 16 bytes long.
 Data: < &#192;&#193;b&#247;           > 18 C0 C1 62 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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