Task 38671833

Name test_154-GPUGRID_TEST_ATM_40STEP_20261023-21-40-RND5883_0
Workunit 31614018
Created 25 Oct 2026, 21:42:55 UTC
Sent 25 Oct 2026, 21:42:56 UTC
Report deadline 30 Oct 2026, 21:42:56 UTC
Received 27 Oct 2026, 14:04:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 601046
Run time 30 min 7 sec
CPU time 23 min 46 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 35,585.07 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 685.81 MB
Peak swap size 8.50 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
17:44:53 (9944): wrapper (7.9.26016): starting
17:44:53 (9944): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:44:54 (9944): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:44:54 (9944): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\21\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\21\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
09:39:39 (29640): wrapper (7.9.26016): starting
09:39:39 (29640): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\21\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
10:04:08 (29640): C:/Windows/system32/cmd.exe exited; CPU time 1221.328125
10:04:08 (29640): called boinc_finish(0)
0 bytes in 0 Free Blocks.
462 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 27639641 bytes.
Dumping objects ->
{1582} normal block at 0x0000027482B15140, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1571} normal block at 0x0000027482B14B90, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1560} normal block at 0x0000027482B14C70, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{1549} normal block at 0x0000027482B14B20, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1538} normal block at 0x0000027482B14F80, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{1507} normal block at 0x0000027482AFF500, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1496} normal block at 0x0000027482AFEB20, 103 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {1493} normal block at 0x0000027482B15DD0, 8 bytes long.
 Data: <    t   > 00 00 FF 82 74 02 00 00 
{889} normal block at 0x0000027482AFEBD0, 103 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{305} normal block at 0x0000027482B15E70, 8 bytes long.
 Data: <0j  t   > 30 6A B1 82 74 02 00 00 
{296} normal block at 0x0000027482B06780, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x0000027482B163C0, 16 bytes long.
 Data: <8i  t           > 38 69 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000027482B16550, 16 bytes long.
 Data: < i  t           > 10 69 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000027482B10710, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x0000027482B158D0, 16 bytes long.
 Data: < h  t           > E8 68 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000027482B15F10, 16 bytes long.
 Data: < h  t           > C0 68 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000027482B15D80, 16 bytes long.
 Data: < h  t           > 98 68 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000027482B159C0, 16 bytes long.
 Data: <ph  t           > 70 68 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000027482B14CE0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x0000027482B15E20, 16 bytes long.
 Data: <x   t           > 78 F0 AF 82 74 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000027482B10590, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x0000027482B15CE0, 16 bytes long.
 Data: <P   t           > 50 F0 AF 82 74 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000027482B15920, 16 bytes long.
 Data: <(   t           > 28 F0 AF 82 74 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000027482B16370, 16 bytes long.
 Data: <    t           > 00 F0 AF 82 74 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000027482B162D0, 16 bytes long.
 Data: <    t           > D8 EF AF 82 74 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000027482B15D30, 16 bytes long.
 Data: <    t           > B0 EF AF 82 74 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000027482B15650, 16 bytes long.
 Data: <    t           > 88 EF AF 82 74 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000027482B104D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x0000027482B15B50, 16 bytes long.
 Data: <`   t           > 60 EF AF 82 74 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000027482AFEF60, 320 bytes long.
 Data: <P[  t       t   > 50 5B B1 82 74 02 00 00 D0 04 B1 82 74 02 00 00 
{275} normal block at 0x0000027482B15FB0, 16 bytes long.
 Data: <Ph  t           > 50 68 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000027482B15970, 16 bytes long.
 Data: <(h  t           > 28 68 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000027482B10410, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x0000027482B15A60, 16 bytes long.
 Data: < h  t           > 00 68 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000027482B0FB10, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x0000027482B16320, 16 bytes long.
 Data: <Hg  t           > 48 67 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000027482B15C40, 16 bytes long.
 Data: < g  t           > 20 67 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000027482B15BF0, 16 bytes long.
 Data: < f  t           > F8 66 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000027482B15C90, 16 bytes long.
 Data: < f  t           > D0 66 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000027482B15880, 16 bytes long.
 Data: < f  t           > A8 66 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000027482B156A0, 16 bytes long.
 Data: < f  t           > 80 66 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000027482B15BA0, 16 bytes long.
 Data: < N  t           > A0 4E B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000027482B14EA0, 40 bytes long.
 Data: < [  t       t   > A0 5B B1 82 74 02 00 00 00 F5 AF 82 74 02 00 00 
{261} normal block at 0x0000027482B16280, 16 bytes long.
 Data: <`f  t           > 60 66 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000027482B15F60, 16 bytes long.
 Data: <8f  t           > 38 66 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000027482B0FF30, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x0000027482B15A10, 16 bytes long.
 Data: < f  t           > 10 66 B1 82 74 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000027482B16610, 992 bytes long.
 Data: < Z  t   0   t   > 10 5A B1 82 74 02 00 00 30 FF B0 82 74 02 00 00 
{93} normal block at 0x0000027482B10470, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x0000027482B0F050, 16 bytes long.
 Data: <P   t           > 50 9E B0 82 74 02 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x0000027482B09E50, 40 bytes long.
 Data: <P   t   p   t   > 50 F0 B0 82 74 02 00 00 70 04 B1 82 74 02 00 00 
{70} normal block at 0x0000027482B0F2D0, 16 bytes long.
 Data: <                > 80 EA 84 1D F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000027482B0EF60, 16 bytes long.
 Data: <@               > 40 E9 84 1D F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000027482B0F280, 16 bytes long.
 Data: < W              > F8 57 81 1D F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000027482B0F820, 16 bytes long.
 Data: < W              > D8 57 81 1D F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000027482B0F140, 16 bytes long.
 Data: <P               > 50 04 81 1D F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000027482B0EBA0, 16 bytes long.
 Data: <0               > 30 04 81 1D F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000027482B0EC90, 16 bytes long.
 Data: <                > E0 02 81 1D F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000027482B0F960, 16 bytes long.
 Data: <                > 10 04 81 1D F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000027482B0F410, 16 bytes long.
 Data: <p               > 70 04 81 1D F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000027482B0F780, 16 bytes long.
 Data: <                > 18 C0 7F 1D F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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