Task 38671370

Name test_317-GPUGRID_TEST_ATM_40STEP_20261023-20-40-RND5431_0
Workunit 31613578
Created 25 Oct 2026, 20:18:45 UTC
Sent 25 Oct 2026, 20:18:48 UTC
Report deadline 30 Oct 2026, 20:18:48 UTC
Received 25 Oct 2026, 21:04:21 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 610797
Run time 15 min 19 sec
CPU time 14 min
Validate state Valid
Credit 60,000.00
Device peak FLOPS 56,774.19 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 760.69 MB
Peak swap size 13.05 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.15</core_client_version>
<![CDATA[
<stderr_txt>
21:49:16 (18300): wrapper (7.9.26016): starting
21:49:16 (18300): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:49:17 (18300): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:49:17 (18300): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\DataBOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\DataBOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:03:57 (18300): C:/Windows/system32/cmd.exe exited; CPU time 840.468750
22:03:57 (18300): called boinc_finish(0)
0 bytes in 0 Free Blocks.
380 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 13406187 bytes.
Dumping objects ->
{3835610} normal block at 0x000002BBA4475280, 48 bytes long.
 Data: <PATH=C:\DataBOIN> 50 41 54 48 3D 43 3A 5C 44 61 74 61 42 4F 49 4E 
{3835599} normal block at 0x000002BBA61808A0, 32 bytes long.
 Data: <HOME=C:\DataBOIN> 48 4F 4D 45 3D 43 3A 5C 44 61 74 61 42 4F 49 4E 
{3835588} normal block at 0x000002BBA617F7C0, 32 bytes long.
 Data: <TMP=C:\DataBOINC> 54 4D 50 3D 43 3A 5C 44 61 74 61 42 4F 49 4E 43 
{3835577} normal block at 0x000002BBA6180A80, 32 bytes long.
 Data: <TEMP=C:\DataBOIN> 54 45 4D 50 3D 43 3A 5C 44 61 74 61 42 4F 49 4E 
{3835566} normal block at 0x000002BBA61806C0, 32 bytes long.
 Data: <TMPDIR=C:\DataBO> 54 4D 50 44 49 52 3D 43 3A 5C 44 61 74 61 42 4F 
{3835535} normal block at 0x000002BBA4475750, 48 bytes long.
 Data: <PATH=C:\DataBOIN> 50 41 54 48 3D 43 3A 5C 44 61 74 61 42 4F 49 4E 
{3835524} normal block at 0x000002BBA614F5D0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835521} normal block at 0x000002BBA446D680, 8 bytes long.
 Data: <  @&#164;&#187;   > 00 00 40 A4 BB 02 00 00 
{3834715} normal block at 0x000002BBA614E810, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000002BBA446E490, 8 bytes long.
 Data: < &#229; &#166;&#187;   > 00 E5 04 A6 BB 02 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000002BBA4471AA0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000002BBA4466D10, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000002BBA4475D50, 16 bytes long.
 Data: <HoG&#164;&#187;           > 48 6F 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002BBA4475D00, 16 bytes long.
 Data: < oG&#164;&#187;           > 20 6F 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002BBA446FAF0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000002BBA4476840, 16 bytes long.
 Data: <&#248;nG&#164;&#187;           > F8 6E 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002BBA44763E0, 16 bytes long.
 Data: <&#208;nG&#164;&#187;           > D0 6E 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002BBA4475E90, 16 bytes long.
 Data: <&#168;nG&#164;&#187;           > A8 6E 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002BBA4476B60, 16 bytes long.
 Data: < nG&#164;&#187;           > 80 6E 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002BBA4475050, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000002BBA4476750, 16 bytes long.
 Data: <&#216;&#148;F&#164;&#187;           > D8 94 46 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002BBA446FA90, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000002BBA4476520, 16 bytes long.
 Data: <&#176;&#148;F&#164;&#187;           > B0 94 46 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002BBA4476660, 16 bytes long.
 Data: < &#148;F&#164;&#187;           > 88 94 46 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002BBA4476340, 16 bytes long.
 Data: <`&#148;F&#164;&#187;           > 60 94 46 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002BBA4476B10, 16 bytes long.
 Data: <8&#148;F&#164;&#187;           > 38 94 46 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002BBA4476200, 16 bytes long.
 Data: < &#148;F&#164;&#187;           > 10 94 46 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002BBA4476390, 16 bytes long.
 Data: <&#232;&#147;F&#164;&#187;           > E8 93 46 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002BBA446FBB0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000002BBA4475CB0, 16 bytes long.
 Data: <&#192;&#147;F&#164;&#187;           > C0 93 46 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002BBA44693C0, 320 bytes long.
 Data: <&#176;\G&#164;&#187;   &#176;&#251;F&#164;&#187;   > B0 5C 47 A4 BB 02 00 00 B0 FB 46 A4 BB 02 00 00 
{276} normal block at 0x000002BBA4475F80, 16 bytes long.
 Data: <`nG&#164;&#187;           > 60 6E 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002BBA4476AC0, 16 bytes long.
 Data: <8nG&#164;&#187;           > 38 6E 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002BBA446F550, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000002BBA4475C60, 16 bytes long.
 Data: < nG&#164;&#187;           > 10 6E 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002BBA4470390, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000002BBA4476A70, 16 bytes long.
 Data: <XmG&#164;&#187;           > 58 6D 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002BBA4476610, 16 bytes long.
 Data: <0mG&#164;&#187;           > 30 6D 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002BBA44769D0, 16 bytes long.
 Data: < mG&#164;&#187;           > 08 6D 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002BBA44761B0, 16 bytes long.
 Data: <&#224;lG&#164;&#187;           > E0 6C 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002BBA44762A0, 16 bytes long.
 Data: <&#184;lG&#164;&#187;           > B8 6C 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002BBA44760C0, 16 bytes long.
 Data: < lG&#164;&#187;           > 90 6C 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002BBA4476BB0, 16 bytes long.
 Data: <pVG&#164;&#187;           > 70 56 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002BBA4475670, 40 bytes long.
 Data: <&#176;kG&#164;&#187;   PWG&#164;&#187;   > B0 6B 47 A4 BB 02 00 00 50 57 47 A4 BB 02 00 00 
{262} normal block at 0x000002BBA4476A20, 16 bytes long.
 Data: <plG&#164;&#187;           > 70 6C 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002BBA4476070, 16 bytes long.
 Data: <HlG&#164;&#187;           > 48 6C 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002BBA446F610, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000002BBA44762F0, 16 bytes long.
 Data: < lG&#164;&#187;           > 20 6C 47 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002BBA4476C20, 992 bytes long.
 Data: <&#240;bG&#164;&#187;    &#246;F&#164;&#187;   > F0 62 47 A4 BB 02 00 00 10 F6 46 A4 BB 02 00 00 
{94} normal block at 0x000002BBA4470210, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000002BBA446DD10, 16 bytes long.
 Data: <&#208;&#246;E&#164;&#187;           > D0 F6 45 A4 BB 02 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000002BBA445F6D0, 40 bytes long.
 Data: < &#221;F&#164;&#187;     G&#164;&#187;   > 10 DD 46 A4 BB 02 00 00 10 02 47 A4 BB 02 00 00 
{71} normal block at 0x000002BBA446E260, 16 bytes long.
 Data: < &#234;>7&#246;           > 80 EA 3E 37 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002BBA446DE00, 16 bytes long.
 Data: <@&#233;>7&#246;           > 40 E9 3E 37 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002BBA446DC70, 16 bytes long.
 Data: <&#248;W;7&#246;           > F8 57 3B 37 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002BBA446DB80, 16 bytes long.
 Data: <&#216;W;7&#246;           > D8 57 3B 37 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002BBA446DF40, 16 bytes long.
 Data: <P ;7&#246;           > 50 04 3B 37 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002BBA446DBD0, 16 bytes long.
 Data: <0 ;7&#246;           > 30 04 3B 37 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002BBA446DB30, 16 bytes long.
 Data: <&#224; ;7&#246;           > E0 02 3B 37 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002BBA446E210, 16 bytes long.
 Data: <  ;7&#246;           > 10 04 3B 37 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002BBA446D860, 16 bytes long.
 Data: <p ;7&#246;           > 70 04 3B 37 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002BBA446DDB0, 16 bytes long.
 Data: < &#192;97&#246;           > 18 C0 39 37 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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