Task 38670949

Name test_348-GPUGRID_TEST_ATM_40STEP_20261023-14-40-RND2759_0
Workunit 31613173
Created 25 Oct 2026, 19:04:25 UTC
Sent 25 Oct 2026, 19:04:29 UTC
Report deadline 30 Oct 2026, 19:04:29 UTC
Received 25 Oct 2026, 19:43:33 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 624458
Run time 19 min 28 sec
CPU time 19 min 4 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 44,355.63 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 742.82 MB
Peak swap size 13.00 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:24:24 (6336): wrapper (7.9.26016): starting
15:24:24 (6336): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
15:24:25 (6336): Library/usr/bin/tar.exe exited; CPU time 0.015625
15:24:25 (6336): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
15:43:13 (6336): C:/Windows/system32/cmd.exe exited; CPU time 1144.593750
15:43:13 (6336): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 15944371 bytes.
Dumping objects ->
{3835562} normal block at 0x000001859409B660, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835551} normal block at 0x000001859409AE80, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835540} normal block at 0x000001859409B820, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835529} normal block at 0x000001859409B3C0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835518} normal block at 0x000001859409AB70, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835487} normal block at 0x0000018594099BE0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835476} normal block at 0x0000018595E7EA90, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835473} normal block at 0x000001859406E9A0, 8 bytes long.
 Data: <  c&#148;&#133;   > 00 00 63 94 85 01 00 00 
{3834695} normal block at 0x0000018595E7E930, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833967} normal block at 0x000001859406F670, 8 bytes long.
 Data: <&#208;H&#236;&#149;&#133;   > D0 48 EC 95 85 01 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x0000018594071140, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x00000185940660A0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x0000018594076270, 16 bytes long.
 Data: <&#200;W &#148;&#133;           > C8 57 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x00000185940765E0, 16 bytes long.
 Data: <&#160;W &#148;&#133;           > A0 57 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000185940708B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x00000185940763B0, 16 bytes long.
 Data: <xW &#148;&#133;           > 78 57 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000018594076770, 16 bytes long.
 Data: <PW &#148;&#133;           > 50 57 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000018594075C30, 16 bytes long.
 Data: <(W &#148;&#133;           > 28 57 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000018594075A00, 16 bytes long.
 Data: < W &#148;&#133;           > 00 57 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000018594073980, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x0000018594076860, 16 bytes long.
 Data: <&#232;&#182; &#148;&#133;           > E8 B6 05 94 85 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001859406FA70, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x0000018594076450, 16 bytes long.
 Data: <&#192;&#182; &#148;&#133;           > C0 B6 05 94 85 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000018594075F00, 16 bytes long.
 Data: < &#182; &#148;&#133;           > 98 B6 05 94 85 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000018594076180, 16 bytes long.
 Data: <p&#182; &#148;&#133;           > 70 B6 05 94 85 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000018594076590, 16 bytes long.
 Data: <H&#182; &#148;&#133;           > 48 B6 05 94 85 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000018594076540, 16 bytes long.
 Data: < &#182; &#148;&#133;           > 20 B6 05 94 85 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000018594076810, 16 bytes long.
 Data: <&#248;&#181; &#148;&#133;           > F8 B5 05 94 85 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000018594070370, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x0000018594075B90, 16 bytes long.
 Data: <&#208;&#181; &#148;&#133;           > D0 B5 05 94 85 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001859405B5D0, 320 bytes long.
 Data: < [ &#148;&#133;   p  &#148;&#133;   > 90 5B 07 94 85 01 00 00 70 03 07 94 85 01 00 00 
{279} normal block at 0x0000018594075AF0, 16 bytes long.
 Data: <&#224;V &#148;&#133;           > E0 56 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000018594075D20, 16 bytes long.
 Data: <&#184;V &#148;&#133;           > B8 56 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001859406FE30, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x00000185940766D0, 16 bytes long.
 Data: < V &#148;&#133;           > 90 56 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001859406FBF0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x0000018594075EB0, 16 bytes long.
 Data: <&#216;U &#148;&#133;           > D8 55 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000018594075E60, 16 bytes long.
 Data: <&#176;U &#148;&#133;           > B0 55 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000018594075F50, 16 bytes long.
 Data: < U &#148;&#133;           > 88 55 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000018594076720, 16 bytes long.
 Data: <`U &#148;&#133;           > 60 55 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000018594075E10, 16 bytes long.
 Data: <8U &#148;&#133;           > 38 55 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001859406F7B0, 16 bytes long.
 Data: < U &#148;&#133;           > 10 55 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001859406F710, 16 bytes long.
 Data: < 9 &#148;&#133;           > 10 39 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000018594073910, 40 bytes long.
 Data: < &#247; &#148;&#133;   &#224;&#155;	&#148;&#133;   > 10 F7 06 94 85 01 00 00 E0 9B 09 94 85 01 00 00 
{265} normal block at 0x000001859406F4E0, 16 bytes long.
 Data: <&#240;T &#148;&#133;           > F0 54 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001859406ED60, 16 bytes long.
 Data: <&#200;T &#148;&#133;           > C8 54 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001859406FF50, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x000001859406EA90, 16 bytes long.
 Data: <&#160;T &#148;&#133;           > A0 54 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000185940754A0, 992 bytes long.
 Data: < &#234; &#148;&#133;   P&#255; &#148;&#133;   > 90 EA 06 94 85 01 00 00 50 FF 06 94 85 01 00 00 
{97} normal block at 0x0000018594070850, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x000001859406EF40, 16 bytes long.
 Data: <&#160;? &#148;&#133;           > A0 3F 07 94 85 01 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x0000018594073FA0, 40 bytes long.
 Data: <@&#239; &#148;&#133;   P  &#148;&#133;   > 40 EF 06 94 85 01 00 00 50 08 07 94 85 01 00 00 
{74} normal block at 0x000001859406EB30, 16 bytes long.
 Data: < &#234;  &#247;           > 80 EA 98 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001859406EDB0, 16 bytes long.
 Data: <@&#233;  &#247;           > 40 E9 98 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001859406F120, 16 bytes long.
 Data: <&#248;W&#149; &#247;           > F8 57 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001859406EA40, 16 bytes long.
 Data: <&#216;W&#149; &#247;           > D8 57 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001859406EF90, 16 bytes long.
 Data: <P &#149; &#247;           > 50 04 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001859406F800, 16 bytes long.
 Data: <0 &#149; &#247;           > 30 04 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001859406F0D0, 16 bytes long.
 Data: <&#224; &#149; &#247;           > E0 02 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001859406F530, 16 bytes long.
 Data: <  &#149; &#247;           > 10 04 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001859406F8A0, 16 bytes long.
 Data: <p &#149; &#247;           > 70 04 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001859406E9F0, 16 bytes long.
 Data: < &#192;&#147; &#247;           > 18 C0 93 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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