Task 38670287

Name test_639-GPUGRID_TEST_ATM_40STEP_20261023-18-40-RND5935_0
Workunit 31612543
Created 25 Oct 2026, 17:04:06 UTC
Sent 25 Oct 2026, 17:04:07 UTC
Report deadline 30 Oct 2026, 17:04:07 UTC
Received 25 Oct 2026, 18:48:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 583658
Run time 55 min 18 sec
CPU time 53 min 9 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 4,419.60 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 670.31 MB
Peak swap size 3.71 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
13:54:47 (59016): wrapper (7.9.26016): starting
13:54:47 (59016): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
13:54:49 (59016): Library/usr/bin/tar.exe exited; CPU time 0.000000
13:54:49 (59016): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
14:48:23 (59016): C:/Windows/system32/cmd.exe exited; CPU time 3189.468750
14:48:23 (59016): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 73015071 bytes.
Dumping objects ->
{3835315} normal block at 0x00000175F86F13A0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835304} normal block at 0x00000175F86F1100, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835293} normal block at 0x00000175F86F0A70, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835282} normal block at 0x00000175F86F1560, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835271} normal block at 0x00000175F86F1250, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835240} normal block at 0x00000175F879C030, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835229} normal block at 0x00000175F87FDE30, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835226} normal block at 0x00000175F6CA7260, 8 bytes long.
 Data: <  W&#248;u   > 00 00 57 F8 75 01 00 00 
{3834574} normal block at 0x00000175F87FD6A0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833951} normal block at 0x00000175F6CA6860, 8 bytes long.
 Data: < &#233;o&#248;u   > 20 E9 6F F8 75 01 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x00000175F6CB11B0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000175F6CB20F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x00000175F6CB22E0, 16 bytes long.
 Data: <&#216;8&#203;&#246;u           > D8 38 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000175F6CB2600, 16 bytes long.
 Data: <&#176;8&#203;&#246;u           > B0 38 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000175F6CAD480, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x00000175F6CB2D30, 16 bytes long.
 Data: < 8&#203;&#246;u           > 88 38 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000175F6CB2EC0, 16 bytes long.
 Data: <`8&#203;&#246;u           > 60 38 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000175F6CB2E70, 16 bytes long.
 Data: <88&#203;&#246;u           > 38 38 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000175F6CB2C90, 16 bytes long.
 Data: < 8&#203;&#246;u           > 10 38 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000175F6CAB6C0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x00000175F6CB2BA0, 16 bytes long.
 Data: <  &#203;&#246;u           > 88 20 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000175F6CACD60, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x00000175F6CB3140, 16 bytes long.
 Data: <` &#203;&#246;u           > 60 20 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000175F6CB2B50, 16 bytes long.
 Data: <8 &#203;&#246;u           > 38 20 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000175F6CB2290, 16 bytes long.
 Data: <  &#203;&#246;u           > 10 20 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000175F6CB2F10, 16 bytes long.
 Data: <&#232; &#203;&#246;u           > E8 1F CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000175F6CB2FB0, 16 bytes long.
 Data: <&#192; &#203;&#246;u           > C0 1F CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000175F6CB2F60, 16 bytes long.
 Data: <  &#203;&#246;u           > 98 1F CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000175F6CACD00, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x00000175F6CB28D0, 16 bytes long.
 Data: <p &#203;&#246;u           > 70 1F CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000175F6CB1F70, 320 bytes long.
 Data: <&#208;(&#203;&#246;u    &#205;&#202;&#246;u   > D0 28 CB F6 75 01 00 00 00 CD CA F6 75 01 00 00 
{271} normal block at 0x00000175F6CB30A0, 16 bytes long.
 Data: <&#240;7&#203;&#246;u           > F0 37 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000175F6CB2970, 16 bytes long.
 Data: <&#200;7&#203;&#246;u           > C8 37 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000175F6CAD7E0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x00000175F6CB2E20, 16 bytes long.
 Data: <&#160;7&#203;&#246;u           > A0 37 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000175F6CAD120, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x00000175F6CB2470, 16 bytes long.
 Data: <&#232;6&#203;&#246;u           > E8 36 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000175F6CB2AB0, 16 bytes long.
 Data: <&#192;6&#203;&#246;u           > C0 36 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000175F6CB2B00, 16 bytes long.
 Data: < 6&#203;&#246;u           > 98 36 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000175F6CB3050, 16 bytes long.
 Data: <p6&#203;&#246;u           > 70 36 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000175F6CB2C40, 16 bytes long.
 Data: <H6&#203;&#246;u           > 48 36 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000175F6CB2420, 16 bytes long.
 Data: < 6&#203;&#246;u           > 20 36 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000175F6CB2920, 16 bytes long.
 Data: <P&#182;&#202;&#246;u           > 50 B6 CA F6 75 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000175F6CAB650, 40 bytes long.
 Data: < )&#203;&#246;u   0&#192;y&#248;u   > 20 29 CB F6 75 01 00 00 30 C0 79 F8 75 01 00 00 
{257} normal block at 0x00000175F6CB2330, 16 bytes long.
 Data: < 6&#203;&#246;u           > 00 36 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000175F6CB30F0, 16 bytes long.
 Data: <&#216;5&#203;&#246;u           > D8 35 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000175F6CAD780, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x00000175F6CB27E0, 16 bytes long.
 Data: <&#176;5&#203;&#246;u           > B0 35 CB F6 75 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x00000175F6CB35B0, 992 bytes long.
 Data: <&#224;'&#203;&#246;u    &#215;&#202;&#246;u   > E0 27 CB F6 75 01 00 00 80 D7 CA F6 75 01 00 00 
{89} normal block at 0x00000175F6CACEE0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x00000175F6CA6BD0, 16 bytes long.
 Data: <&#176;&#179;&#202;&#246;u           > B0 B3 CA F6 75 01 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x00000175F6CAB3B0, 40 bytes long.
 Data: <&#208;k&#202;&#246;u   &#224;&#206;&#202;&#246;u   > D0 6B CA F6 75 01 00 00 E0 CE CA F6 75 01 00 00 
{66} normal block at 0x00000175F6CA6680, 16 bytes long.
 Data: < &#234; w&#246;           > 80 EA 0F 77 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000175F6CA6630, 16 bytes long.
 Data: <@&#233; w&#246;           > 40 E9 0F 77 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000175F6CA6CC0, 16 bytes long.
 Data: <&#248;W w&#246;           > F8 57 0C 77 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000175F6CA65E0, 16 bytes long.
 Data: <&#216;W w&#246;           > D8 57 0C 77 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000175F6CA67C0, 16 bytes long.
 Data: <P  w&#246;           > 50 04 0C 77 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000175F6CA6720, 16 bytes long.
 Data: <0  w&#246;           > 30 04 0C 77 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000175F6CA6EF0, 16 bytes long.
 Data: <&#224;  w&#246;           > E0 02 0C 77 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000175F6CA6F90, 16 bytes long.
 Data: <   w&#246;           > 10 04 0C 77 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000175F6CA6770, 16 bytes long.
 Data: <p  w&#246;           > 70 04 0C 77 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000175F6CA71C0, 16 bytes long.
 Data: < &#192; w&#246;           > 18 C0 0A 77 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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