Task 38669748

Name test_290-GPUGRID_TEST_ATM_40STEP_20261023-18-40-RND6659_0
Workunit 31612058
Created 25 Oct 2026, 15:27:55 UTC
Sent 25 Oct 2026, 15:28:06 UTC
Report deadline 30 Oct 2026, 15:28:06 UTC
Received 25 Oct 2026, 16:06:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 624458
Run time 19 min 23 sec
CPU time 18 min 52 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 44,355.63 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 749.30 MB
Peak swap size 13.01 GB
Peak disk usage 3.74 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:47:56 (620): wrapper (7.9.26016): starting
11:47:56 (620): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
11:47:57 (620): Library/usr/bin/tar.exe exited; CPU time 0.000000
11:47:57 (620): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
12:06:40 (620): C:/Windows/system32/cmd.exe exited; CPU time 1132.265625
12:06:40 (620): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 14796139 bytes.
Dumping objects ->
{3835562} normal block at 0x0000026F3642B9C0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835551} normal block at 0x0000026F3642B3A0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835540} normal block at 0x0000026F3642AD80, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835529} normal block at 0x0000026F3642B870, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835518} normal block at 0x0000026F3642AF40, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835487} normal block at 0x0000026F3642A940, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835476} normal block at 0x0000026F380CEEB0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835473} normal block at 0x0000026F363FF1A0, 8 bytes long.
 Data: <  &#228;7o   > 00 00 E4 37 6F 02 00 00 
{3834695} normal block at 0x0000026F380CE5C0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833967} normal block at 0x0000026F363FEE30, 8 bytes long.
 Data: <&#208;H 8o   > D0 48 11 38 6F 02 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x0000026F36401620, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x0000026F363F5FF0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x0000026F364058F0, 16 bytes long.
 Data: <&#168;W@6o           > A8 57 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000026F36405E90, 16 bytes long.
 Data: < W@6o           > 80 57 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000026F363FFB10, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x0000026F36405C60, 16 bytes long.
 Data: <XW@6o           > 58 57 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000026F36406200, 16 bytes long.
 Data: <0W@6o           > 30 57 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000026F36406840, 16 bytes long.
 Data: < W@6o           > 08 57 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000026F364062F0, 16 bytes long.
 Data: <&#224;V@6o           > E0 56 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000026F36403E30, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x0000026F36405F30, 16 bytes long.
 Data: <&#232;&#182;>6o           > E8 B6 3E 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000026F363FFED0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x0000026F364062A0, 16 bytes long.
 Data: <&#192;&#182;>6o           > C0 B6 3E 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000026F364063E0, 16 bytes long.
 Data: < &#182;>6o           > 98 B6 3E 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000026F36405C10, 16 bytes long.
 Data: <p&#182;>6o           > 70 B6 3E 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000026F364065C0, 16 bytes long.
 Data: <H&#182;>6o           > 48 B6 3E 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000026F36405E40, 16 bytes long.
 Data: < &#182;>6o           > 20 B6 3E 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000026F36405DA0, 16 bytes long.
 Data: <&#248;&#181;>6o           > F8 B5 3E 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000026F36400590, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x0000026F36405D50, 16 bytes long.
 Data: <&#208;&#181;>6o           > D0 B5 3E 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000026F363EB5D0, 320 bytes long.
 Data: <P]@6o     @6o   > 50 5D 40 36 6F 02 00 00 90 05 40 36 6F 02 00 00 
{279} normal block at 0x0000026F36405D00, 16 bytes long.
 Data: <&#192;V@6o           > C0 56 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000026F36405BC0, 16 bytes long.
 Data: < V@6o           > 98 56 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000026F36400530, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x0000026F36405DF0, 16 bytes long.
 Data: <pV@6o           > 70 56 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000026F363FFC90, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x0000026F36405B70, 16 bytes long.
 Data: <&#184;U@6o           > B8 55 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000026F36406250, 16 bytes long.
 Data: < U@6o           > 90 55 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000026F36406020, 16 bytes long.
 Data: <hU@6o           > 68 55 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000026F36406390, 16 bytes long.
 Data: <@U@6o           > 40 55 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000026F36405CB0, 16 bytes long.
 Data: < U@6o           > 18 55 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000026F363FEE80, 16 bytes long.
 Data: <&#240;T@6o           > F0 54 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000026F363FEED0, 16 bytes long.
 Data: < ?@6o           > 10 3F 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000026F36403F10, 40 bytes long.
 Data: <&#208;&#238;?6o   @&#169;B6o   > D0 EE 3F 36 6F 02 00 00 40 A9 42 36 6F 02 00 00 
{265} normal block at 0x0000026F363FEB10, 16 bytes long.
 Data: <&#208;T@6o           > D0 54 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000026F363FEAC0, 16 bytes long.
 Data: <&#168;T@6o           > A8 54 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000026F36400470, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x0000026F363FE9D0, 16 bytes long.
 Data: < T@6o           > 80 54 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000026F36405480, 992 bytes long.
 Data: <&#208;&#233;?6o   p @6o   > D0 E9 3F 36 6F 02 00 00 70 04 40 36 6F 02 00 00 
{97} normal block at 0x0000026F363FFBD0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x0000026F363FF150, 16 bytes long.
 Data: < 8@6o           > 80 38 40 36 6F 02 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x0000026F36403880, 40 bytes long.
 Data: <P&#241;?6o   &#208;&#251;?6o   > 50 F1 3F 36 6F 02 00 00 D0 FB 3F 36 6F 02 00 00 
{74} normal block at 0x0000026F363FF380, 16 bytes long.
 Data: < &#234;  &#247;           > 80 EA 98 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000026F363FED90, 16 bytes long.
 Data: <@&#233;  &#247;           > 40 E9 98 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000026F363FEBB0, 16 bytes long.
 Data: <&#248;W&#149; &#247;           > F8 57 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000026F363FECA0, 16 bytes long.
 Data: <&#216;W&#149; &#247;           > D8 57 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000026F363FF6A0, 16 bytes long.
 Data: <P &#149; &#247;           > 50 04 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000026F363FF3D0, 16 bytes long.
 Data: <0 &#149; &#247;           > 30 04 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000026F363FEC50, 16 bytes long.
 Data: <&#224; &#149; &#247;           > E0 02 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000026F363FF060, 16 bytes long.
 Data: <  &#149; &#247;           > 10 04 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000026F363FF420, 16 bytes long.
 Data: <p &#149; &#247;           > 70 04 95 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000026F363FF470, 16 bytes long.
 Data: < &#192;&#147; &#247;           > 18 C0 93 04 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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