Task 38669382

Name test_348-GPUGRID_TEST_ATM_40STEP_20261023-9-40-RND2759_0
Workunit 31611737
Created 25 Oct 2026, 14:25:46 UTC
Sent 25 Oct 2026, 14:25:55 UTC
Report deadline 30 Oct 2026, 14:25:55 UTC
Received 25 Oct 2026, 14:56:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 638094
Run time 22 min 5 sec
CPU time 21 min 4 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 41,014.83 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 745.84 MB
Peak swap size 12.99 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
01:35:04 (17260): wrapper (7.9.26016): starting
01:35:04 (17260): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
01:35:05 (17260): Library/usr/bin/tar.exe exited; CPU time 0.000000
01:35:05 (17260): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\34\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\34\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
01:56:17 (17260): C:/Windows/system32/cmd.exe exited; CPU time 1264.953125
01:56:17 (17260): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 23444069 bytes.
Dumping objects ->
{3835653} normal block at 0x0000019A4C01CD60, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835642} normal block at 0x0000019A4C01D460, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835631} normal block at 0x0000019A4A2647F0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835620} normal block at 0x0000019A4A264710, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835609} normal block at 0x0000019A4A2646A0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835578} normal block at 0x0000019A4C067EA0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835567} normal block at 0x0000019A4C07E710, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835564} normal block at 0x0000019A4A25F2B0, 8 bytes long.
 Data: <  &#132;J&#154;   > 00 00 84 4A 9A 01 00 00 
{3834735} normal block at 0x0000019A4C07E5B0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833971} normal block at 0x0000019A4A25EC70, 8 bytes long.
 Data: <&#160;@&J&#154;   > A0 40 26 4A 9A 01 00 00 
..\zip\boinc_zip.cpp(122) : {317} normal block at 0x0000019A4A2611C0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x0000019A4A256BD0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{301} normal block at 0x0000019A4A265F30, 16 bytes long.
 Data: <&#200;g&J&#154;           > C8 67 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x0000019A4A265E90, 16 bytes long.
 Data: <&#160;g&J&#154;           > A0 67 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000019A4A25D710, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{298} normal block at 0x0000019A4A266390, 16 bytes long.
 Data: <xg&J&#154;           > 78 67 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000019A4A266020, 16 bytes long.
 Data: <Pg&J&#154;           > 50 67 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000019A4A2654E0, 16 bytes long.
 Data: <(g&J&#154;           > 28 67 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000019A4A265940, 16 bytes long.
 Data: < g&J&#154;           > 00 67 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000019A4A264B70, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{293} normal block at 0x0000019A4A2662F0, 16 bytes long.
 Data: <xS&J&#154;           > 78 53 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000019A4A25DC50, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{291} normal block at 0x0000019A4A2660C0, 16 bytes long.
 Data: <PS&J&#154;           > 50 53 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000019A4A2662A0, 16 bytes long.
 Data: <(S&J&#154;           > 28 53 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000019A4A2655D0, 16 bytes long.
 Data: < S&J&#154;           > 00 53 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000019A4A265A80, 16 bytes long.
 Data: <&#216;R&J&#154;           > D8 52 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000019A4A265B70, 16 bytes long.
 Data: <&#176;R&J&#154;           > B0 52 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000019A4A265B20, 16 bytes long.
 Data: < R&J&#154;           > 88 52 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000019A4A25DA70, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{283} normal block at 0x0000019A4A266430, 16 bytes long.
 Data: <`R&J&#154;           > 60 52 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000019A4A265260, 320 bytes long.
 Data: <0d&J&#154;   p&#218;%J&#154;   > 30 64 26 4A 9A 01 00 00 70 DA 25 4A 9A 01 00 00 
{281} normal block at 0x0000019A4A265FD0, 16 bytes long.
 Data: <&#224;f&J&#154;           > E0 66 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000019A4A2659E0, 16 bytes long.
 Data: <&#184;f&J&#154;           > B8 66 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000019A4A25DBF0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{278} normal block at 0x0000019A4A265C60, 16 bytes long.
 Data: < f&J&#154;           > 90 66 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000019A4A25DDD0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{276} normal block at 0x0000019A4A2657B0, 16 bytes long.
 Data: <&#216;e&J&#154;           > D8 65 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000019A4A266110, 16 bytes long.
 Data: <&#176;e&J&#154;           > B0 65 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000019A4A266250, 16 bytes long.
 Data: < e&J&#154;           > 88 65 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000019A4A265850, 16 bytes long.
 Data: <`e&J&#154;           > 60 65 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000019A4A2656C0, 16 bytes long.
 Data: <8e&J&#154;           > 38 65 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000019A4A265A30, 16 bytes long.
 Data: < e&J&#154;           > 10 65 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000019A4A2658A0, 16 bytes long.
 Data: <`H&J&#154;           > 60 48 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000019A4A264860, 40 bytes long.
 Data: <&#160;X&J&#154;   &#160;~ L&#154;   > A0 58 26 4A 9A 01 00 00 A0 7E 06 4C 9A 01 00 00 
{267} normal block at 0x0000019A4A265E40, 16 bytes long.
 Data: <&#240;d&J&#154;           > F0 64 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000019A4A265EE0, 16 bytes long.
 Data: <&#200;d&J&#154;           > C8 64 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000019A4A25D470, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{264} normal block at 0x0000019A4A265F80, 16 bytes long.
 Data: <&#160;d&J&#154;           > A0 64 26 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000019A4A2664A0, 992 bytes long.
 Data: < _&J&#154;   p&#212;%J&#154;   > 80 5F 26 4A 9A 01 00 00 70 D4 25 4A 9A 01 00 00 
{99} normal block at 0x0000019A4A25DA10, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{98} normal block at 0x0000019A4A25F800, 16 bytes long.
 Data: < &#230;$J&#154;           > 90 E6 24 4A 9A 01 00 00 00 00 00 00 00 00 00 00 
{97} normal block at 0x0000019A4A24E690, 40 bytes long.
 Data: < &#248;%J&#154;    &#218;%J&#154;   > 00 F8 25 4A 9A 01 00 00 10 DA 25 4A 9A 01 00 00 
{76} normal block at 0x0000019A4A25F170, 16 bytes long.
 Data: < &#234;  &#247;           > 80 EA 13 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x0000019A4A25EE00, 16 bytes long.
 Data: <@&#233;  &#247;           > 40 E9 13 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000019A4A25F9E0, 16 bytes long.
 Data: <&#248;W  &#247;           > F8 57 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000019A4A25F300, 16 bytes long.
 Data: <&#216;W  &#247;           > D8 57 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000019A4A25F760, 16 bytes long.
 Data: <P   &#247;           > 50 04 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000019A4A25F6C0, 16 bytes long.
 Data: <0   &#247;           > 30 04 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000019A4A25EC20, 16 bytes long.
 Data: <&#224;   &#247;           > E0 02 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000019A4A25F620, 16 bytes long.
 Data: <    &#247;           > 10 04 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000019A4A25EEA0, 16 bytes long.
 Data: <p   &#247;           > 70 04 10 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000019A4A25F080, 16 bytes long.
 Data: < &#192;  &#247;           > 18 C0 0E 80 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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