Task 38668707

Name test_178-GPUGRID_TEST_ATM_40STEP_20261023-8-40-RND6894_0
Workunit 31611162
Created 25 Oct 2026, 12:31:42 UTC
Sent 25 Oct 2026, 12:31:48 UTC
Report deadline 30 Oct 2026, 12:31:48 UTC
Received 25 Oct 2026, 12:51:27 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 650591
Run time 18 min 36 sec
CPU time 17 min 45 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 32,075.31 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 746.37 MB
Peak swap size 12.96 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
13:32:54 (18712): wrapper (7.9.26016): starting
13:32:54 (18712): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
13:32:55 (18712): Library/usr/bin/tar.exe exited; CPU time 0.000000
13:32:55 (18712): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'G:\BOINC\DATA\slots\8\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'G:\BOINC\DATA\slots\8\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
13:50:45 (18712): C:/Windows/system32/cmd.exe exited; CPU time 1065.406250
13:50:45 (18712): called boinc_finish(0)
0 bytes in 0 Free Blocks.
176 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 17159037 bytes.
Dumping objects ->
{3835187} normal block at 0x00000236F1D390E0, 48 bytes long.
 Data: <PATH=G:\BOINC\DA> 50 41 54 48 3D 47 3A 5C 42 4F 49 4E 43 5C 44 41 
{3835176} normal block at 0x00000236F3C081E0, 32 bytes long.
 Data: <HOME=G:\BOINC\DA> 48 4F 4D 45 3D 47 3A 5C 42 4F 49 4E 43 5C 44 41 
{3835165} normal block at 0x00000236F3C082A0, 32 bytes long.
 Data: <TMP=G:\BOINC\DAT> 54 4D 50 3D 47 3A 5C 42 4F 49 4E 43 5C 44 41 54 
{3835154} normal block at 0x00000236F3C08420, 32 bytes long.
 Data: <TEMP=G:\BOINC\DA> 54 45 4D 50 3D 47 3A 5C 42 4F 49 4E 43 5C 44 41 
{3835143} normal block at 0x00000236F3C08F60, 32 bytes long.
 Data: <TMPDIR=G:\BOINC\> 54 4D 50 44 49 52 3D 47 3A 5C 42 4F 49 4E 43 5C 
{3835112} normal block at 0x00000236F1D38C80, 48 bytes long.
 Data: <PATH=G:\BOINC\DA> 50 41 54 48 3D 47 3A 5C 42 4F 49 4E 43 5C 44 41 
..\api\boinc_api.cpp(309) : {3835099} normal block at 0x00000236F1D30A40, 8 bytes long.
 Data: <  $&#242;6   > 00 00 24 F2 36 02 00 00 
{3833951} normal block at 0x00000236F1D30B30, 8 bytes long.
 Data: <&#192;z&#196;&#243;6   > C0 7A C4 F3 36 02 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x00000236F1D34120, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000236F1D1FD00, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x00000236F1D38210, 16 bytes long.
 Data: <X&#138;&#211;&#241;6           > 58 8A D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000236F1D384E0, 16 bytes long.
 Data: <0&#138;&#211;&#241;6           > 30 8A D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000236F1D326B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x00000236F1D37CC0, 16 bytes long.
 Data: < &#138;&#211;&#241;6           > 08 8A D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000236F1D37DB0, 16 bytes long.
 Data: <&#224;&#137;&#211;&#241;6           > E0 89 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000236F1D37C70, 16 bytes long.
 Data: <&#184;&#137;&#211;&#241;6           > B8 89 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000236F1D383A0, 16 bytes long.
 Data: < &#137;&#211;&#241;6           > 90 89 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000236F1D38DD0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x00000236F1D37EA0, 16 bytes long.
 Data: <&#168; &#210;&#241;6           > A8 BD D2 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000236F1D31E10, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x00000236F1D38260, 16 bytes long.
 Data: <  &#210;&#241;6           > 80 BD D2 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000236F1D38030, 16 bytes long.
 Data: <X &#210;&#241;6           > 58 BD D2 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000236F1D37BD0, 16 bytes long.
 Data: <0 &#210;&#241;6           > 30 BD D2 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000236F1D38080, 16 bytes long.
 Data: <  &#210;&#241;6           > 08 BD D2 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000236F1D379F0, 16 bytes long.
 Data: <&#224;&#188;&#210;&#241;6           > E0 BC D2 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000236F1D37860, 16 bytes long.
 Data: <&#184;&#188;&#210;&#241;6           > B8 BC D2 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000236F1D31D50, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x00000236F1D380D0, 16 bytes long.
 Data: < &#188;&#210;&#241;6           > 90 BC D2 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000236F1D2BC90, 320 bytes long.
 Data: <&#208; &#211;&#241;6   P &#211;&#241;6   > D0 80 D3 F1 36 02 00 00 50 1D D3 F1 36 02 00 00 
{271} normal block at 0x00000236F1D38530, 16 bytes long.
 Data: <p&#137;&#211;&#241;6           > 70 89 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000236F1D381C0, 16 bytes long.
 Data: <H&#137;&#211;&#241;6           > 48 89 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000236F1D32590, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x00000236F1D37810, 16 bytes long.
 Data: < &#137;&#211;&#241;6           > 20 89 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000236F1D32470, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x00000236F1D38170, 16 bytes long.
 Data: <h &#211;&#241;6           > 68 88 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000236F1D37B80, 16 bytes long.
 Data: <@ &#211;&#241;6           > 40 88 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000236F1D379A0, 16 bytes long.
 Data: <  &#211;&#241;6           > 18 88 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000236F1D38440, 16 bytes long.
 Data: <&#240;&#135;&#211;&#241;6           > F0 87 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000236F1D37C20, 16 bytes long.
 Data: <&#200;&#135;&#211;&#241;6           > C8 87 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000236F1D377C0, 16 bytes long.
 Data: <&#160;&#135;&#211;&#241;6           > A0 87 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000236F1D37770, 16 bytes long.
 Data: <  &#211;&#241;6           > 00 19 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000236F1D31900, 40 bytes long.
 Data: <pw&#211;&#241;6    &#140;&#211;&#241;6   > 70 77 D3 F1 36 02 00 00 80 8C D3 F1 36 02 00 00 
{257} normal block at 0x00000236F1D37E00, 16 bytes long.
 Data: < &#135;&#211;&#241;6           > 80 87 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000236F1D37900, 16 bytes long.
 Data: <X&#135;&#211;&#241;6           > 58 87 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000236F1D32350, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x00000236F1D37A40, 16 bytes long.
 Data: <0&#135;&#211;&#241;6           > 30 87 D3 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x00000236F1D38730, 992 bytes long.
 Data: <@z&#211;&#241;6   P#&#211;&#241;6   > 40 7A D3 F1 36 02 00 00 50 23 D3 F1 36 02 00 00 
{89} normal block at 0x00000236F1D328F0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x00000236F1D2FFF0, 16 bytes long.
 Data: <&#208;&#197;&#209;&#241;6           > D0 C5 D1 F1 36 02 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x00000236F1D1C5D0, 40 bytes long.
 Data: <&#240; &#210;&#241;6   &#240;(&#211;&#241;6   > F0 FF D2 F1 36 02 00 00 F0 28 D3 F1 36 02 00 00 
{66} normal block at 0x00000236F1D30090, 16 bytes long.
 Data: < &#234; &#236;&#246;           > 80 EA 90 EC F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000236F1D30130, 16 bytes long.
 Data: <@&#233; &#236;&#246;           > 40 E9 90 EC F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000236F1D30D60, 16 bytes long.
 Data: <&#248;W&#141;&#236;&#246;           > F8 57 8D EC F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000236F1D30810, 16 bytes long.
 Data: <&#216;W&#141;&#236;&#246;           > D8 57 8D EC F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000236F1D30E00, 16 bytes long.
 Data: <P &#141;&#236;&#246;           > 50 04 8D EC F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000236F1D306D0, 16 bytes long.
 Data: <0 &#141;&#236;&#246;           > 30 04 8D EC F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000236F1D308B0, 16 bytes long.
 Data: <&#224; &#141;&#236;&#246;           > E0 02 8D EC F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000236F1D30450, 16 bytes long.
 Data: <  &#141;&#236;&#246;           > 10 04 8D EC F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000236F1D30680, 16 bytes long.
 Data: <p &#141;&#236;&#246;           > 70 04 8D EC F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000236F1D30D10, 16 bytes long.
 Data: < &#192;&#139;&#236;&#246;           > 18 C0 8B EC F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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