Task 38668580

Name test_375-GPUGRID_TEST_ATM_40STEP_20261023-14-40-RND8953_0
Workunit 31611067
Created 25 Oct 2026, 12:10:22 UTC
Sent 25 Oct 2026, 12:10:26 UTC
Report deadline 30 Oct 2026, 12:10:26 UTC
Received 25 Oct 2026, 14:09:27 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 632067
Run time 1 hours 58 min 2 sec
CPU time 1 hours 49 min 52 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 4,333.07 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 744.34 MB
Peak swap size 8.40 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:14:09 (13576): wrapper (7.9.26016): starting
07:14:09 (13576): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
07:14:10 (13576): Library/usr/bin/tar.exe exited; CPU time 0.000000
07:14:10 (13576): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
09:08:58 (13576): C:/Windows/system32/cmd.exe exited; CPU time 6592.562500
09:08:58 (13576): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 124850201 bytes.
Dumping objects ->
{3835438} normal block at 0x00000266FEA7ABC0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835427} normal block at 0x00000266FEA556A0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835416} normal block at 0x00000266FEA555C0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835405} normal block at 0x00000266FEA554E0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835394} normal block at 0x00000266FEA55010, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835363} normal block at 0x00000266FF4799C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835350} normal block at 0x00000266FEA509F0, 8 bytes long.
 Data: <   &#254;f   > 00 00 9D FE 66 02 00 00 
{3833965} normal block at 0x00000266FEA506D0, 8 bytes long.
 Data: <@ZP&#255;f   > 40 5A 50 FF 66 02 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x00000266FEA467B0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x00000266FEA482C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x00000266FEA561C0, 16 bytes long.
 Data: < o&#165;&#254;f           > 08 6F A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000266FEA55C70, 16 bytes long.
 Data: <&#224;n&#165;&#254;f           > E0 6E A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000266FEA4F090, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x00000266FEA55F90, 16 bytes long.
 Data: <&#184;n&#165;&#254;f           > B8 6E A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000266FEA567B0, 16 bytes long.
 Data: < n&#165;&#254;f           > 90 6E A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000266FEA560D0, 16 bytes long.
 Data: <hn&#165;&#254;f           > 68 6E A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000266FEA56710, 16 bytes long.
 Data: <@n&#165;&#254;f           > 40 6E A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000266FEA55320, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x00000266FEA55F40, 16 bytes long.
 Data: < &#189;&#163;&#254;f           > 98 BD A3 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000266FEA4EBB0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x00000266FEA56800, 16 bytes long.
 Data: <p&#189;&#163;&#254;f           > 70 BD A3 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000266FEA56850, 16 bytes long.
 Data: <H&#189;&#163;&#254;f           > 48 BD A3 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000266FEA55EA0, 16 bytes long.
 Data: < &#189;&#163;&#254;f           > 20 BD A3 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000266FEA56760, 16 bytes long.
 Data: <&#248;&#188;&#163;&#254;f           > F8 BC A3 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000266FEA568A0, 16 bytes long.
 Data: <&#208;&#188;&#163;&#254;f           > D0 BC A3 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000266FEA55EF0, 16 bytes long.
 Data: <&#168;&#188;&#163;&#254;f           > A8 BC A3 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000266FEA4EFD0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x00000266FEA55C20, 16 bytes long.
 Data: < &#188;&#163;&#254;f           > 80 BC A3 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000266FEA3BC80, 320 bytes long.
 Data: < \&#165;&#254;f   &#208;&#239;&#164;&#254;f   > 20 5C A5 FE 66 02 00 00 D0 EF A4 FE 66 02 00 00 
{278} normal block at 0x00000266FEA565D0, 16 bytes long.
 Data: < n&#165;&#254;f           > 20 6E A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000266FEA56170, 16 bytes long.
 Data: <&#248;m&#165;&#254;f           > F8 6D A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000266FEA4EF70, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x00000266FEA55D10, 16 bytes long.
 Data: <&#208;m&#165;&#254;f           > D0 6D A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000266FEA4EB50, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x00000266FEA56B20, 16 bytes long.
 Data: < m&#165;&#254;f           > 18 6D A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000266FEA566C0, 16 bytes long.
 Data: <&#240;l&#165;&#254;f           > F0 6C A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000266FEA56210, 16 bytes long.
 Data: <&#200;l&#165;&#254;f           > C8 6C A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000266FEA564E0, 16 bytes long.
 Data: <&#160;l&#165;&#254;f           > A0 6C A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000266FEA55E50, 16 bytes long.
 Data: <xl&#165;&#254;f           > 78 6C A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000266FEA56990, 16 bytes long.
 Data: <Pl&#165;&#254;f           > 50 6C A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000266FEA55CC0, 16 bytes long.
 Data: < P&#165;&#254;f           > 80 50 A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000266FEA55080, 40 bytes long.
 Data: <&#192;\&#165;&#254;f   &#192; G&#255;f   > C0 5C A5 FE 66 02 00 00 C0 99 47 FF 66 02 00 00 
{264} normal block at 0x00000266FEA56AD0, 16 bytes long.
 Data: <0l&#165;&#254;f           > 30 6C A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000266FEA56670, 16 bytes long.
 Data: < l&#165;&#254;f           > 08 6C A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000266FEA4EF10, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x00000266FEA56490, 16 bytes long.
 Data: <&#224;k&#165;&#254;f           > E0 6B A5 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000266FEA56BE0, 992 bytes long.
 Data: < d&#165;&#254;f    &#239;&#164;&#254;f   > 90 64 A5 FE 66 02 00 00 10 EF A4 FE 66 02 00 00 
{96} normal block at 0x00000266FEA4EAF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x00000266FEA50BD0, 16 bytes long.
 Data: < &#202;&#163;&#254;f           > 10 CA A3 FE 66 02 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x00000266FEA3CA10, 40 bytes long.
 Data: <&#208; &#165;&#254;f   &#240;&#234;&#164;&#254;f   > D0 0B A5 FE 66 02 00 00 F0 EA A4 FE 66 02 00 00 
{73} normal block at 0x00000266FEA50950, 16 bytes long.
 Data: < &#234;# &#246;           > 80 EA 23 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x00000266FEA50900, 16 bytes long.
 Data: <@&#233;# &#246;           > 40 E9 23 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000266FEA50E50, 16 bytes long.
 Data: <&#248;W  &#246;           > F8 57 20 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000266FEA51350, 16 bytes long.
 Data: <&#216;W  &#246;           > D8 57 20 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000266FEA50810, 16 bytes long.
 Data: <P   &#246;           > 50 04 20 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000266FEA50E00, 16 bytes long.
 Data: <0   &#246;           > 30 04 20 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000266FEA50D60, 16 bytes long.
 Data: <&#224;   &#246;           > E0 02 20 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000266FEA50A90, 16 bytes long.
 Data: <    &#246;           > 10 04 20 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000266FEA50F40, 16 bytes long.
 Data: <p   &#246;           > 70 04 20 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000266FEA50720, 16 bytes long.
 Data: < &#192;  &#246;           > 18 C0 1E 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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