Task 38668522

Name test_663-GPUGRID_TEST_ATM_40STEP_20261023-17-40-RND0372_0
Workunit 31611025
Created 25 Oct 2026, 11:59:59 UTC
Sent 25 Oct 2026, 12:00:08 UTC
Report deadline 30 Oct 2026, 12:00:08 UTC
Received 25 Oct 2026, 12:04:11 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 585156
Run time 2 min 14 sec
CPU time
Validate state Invalid
Credit 0.00
Device peak FLOPS 43,943.47 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 52.14 MB
Peak swap size 39.22 MB
Peak disk usage 1.57 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<message>
Das Betriebssystem kann (null) nicht ausf�hren.
 (0xc3) - exit code 195 (0xc3)</message>
<stderr_txt>
13:02:39 (31824): wrapper (7.9.26016): starting
13:02:39 (31824): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
13:02:42 (31824): Library/usr/bin/tar.exe exited; CPU time 0.000000
13:02:42 (31824): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\7\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\7\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Traceback (most recent call last):
  File "<frozen runpy>", line 198, in _run_module_as_main
  File "<frozen runpy>", line 88, in _run_code
  File "C:\ProgramData\BOINC\slots\7\Scripts\rbfe_production.exe\__main__.py", line 7, in <module>
  File "C:\ProgramData\BOINC\slots\7\Lib\site-packages\atom_openmm\rbfe_production.py", line 29, in rbfe_production
    rx = openmm_job_RBFE(
         ^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\7\Lib\site-packages\atom_openmm\openmm_async_re.py", line 427, in __init__
    self.service_worker = ommworkercls(self.basename, service_ommsys, self.keywords, compute = False, logger = self.logger)
                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\7\Lib\site-packages\atom_openmm\ommworker.py", line 53, in __init__
    self.start_worker()
  File "C:\ProgramData\BOINC\slots\7\Lib\site-packages\atom_openmm\ommworker.py", line 443, in start_worker
    self._openmm_worker_body()
  File "C:\ProgramData\BOINC\slots\7\Lib\site-packages\atom_openmm\ommworker.py", line 198, in _openmm_worker_body
    self.ommsystem.create_system()
  File "C:\ProgramData\BOINC\slots\7\Lib\site-packages\atom_openmm\ommsystem.py", line 872, in create_system
    self.load_system()
  File "C:\ProgramData\BOINC\slots\7\Lib\site-packages\atom_openmm\ommsystem.py", line 105, in load_system
    self.system = XmlSerializer.deserialize(input.read())
                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\7\Lib\site-packages\openmm\openmm.py", line 19621, in deserialize
    return XmlSerializer.deserializeSystem(inputString)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\7\Lib\site-packages\openmm\openmm.py", line 19530, in deserializeSystem
    return _openmm.XmlSerializer_deserializeSystem(inputString)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
openmm.OpenMMException: bad allocation
13:03:21 (31824): C:/Windows/system32/cmd.exe exited; CPU time 0.656250
13:03:21 (31824): app exit status: 0x16
13:03:21 (31824): called boinc_finish(195)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 1117025 bytes.
Dumping objects ->
{3835244} normal block at 0x000001E7C8EC65F0, 48 bytes long.
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{3835233} normal block at 0x000001E7C8EC7230, 48 bytes long.
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{3835222} normal block at 0x000001E7C8EC6510, 48 bytes long.
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{3835211} normal block at 0x000001E7C8EC6B30, 48 bytes long.
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{3835200} normal block at 0x000001E7C8EC6AC0, 48 bytes long.
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{3835169} normal block at 0x000001E7C8EC78A0, 64 bytes long.
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{3835158} normal block at 0x000001E7CA9FE0E0, 102 bytes long.
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..\api\boinc_api.cpp(309) : {3835155} normal block at 0x000001E7C8E96E80, 8 bytes long.
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{3834549} normal block at 0x000001E7CA9FE450, 102 bytes long.
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{3833965} normal block at 0x000001E7C8E97740, 8 bytes long.
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{293} normal block at 0x000001E7C8EA32A0, 16 bytes long.
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{291} normal block at 0x000001E7C8E9DF80, 48 bytes long.
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{290} normal block at 0x000001E7C8EA3200, 16 bytes long.
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{289} normal block at 0x000001E7C8E9BC20, 32 bytes long.
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{288} normal block at 0x000001E7C8EA39D0, 16 bytes long.
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{286} normal block at 0x000001E7C8EA2E90, 16 bytes long.
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{285} normal block at 0x000001E7C8EA3700, 16 bytes long.
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{284} normal block at 0x000001E7C8EA3980, 16 bytes long.
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{283} normal block at 0x000001E7C8EA2E40, 16 bytes long.
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{280} normal block at 0x000001E7C8EA37F0, 16 bytes long.
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{279} normal block at 0x000001E7C8E9D7A0, 320 bytes long.
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{278} normal block at 0x000001E7C8EA3660, 16 bytes long.
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{277} normal block at 0x000001E7C8EA3750, 16 bytes long.
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{276} normal block at 0x000001E7C8E9C0A0, 32 bytes long.
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{275} normal block at 0x000001E7C8EA3610, 16 bytes long.
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{266} normal block at 0x000001E7C8EA3B10, 16 bytes long.
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{262} normal block at 0x000001E7C8E9C520, 32 bytes long.
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{95} normal block at 0x000001E7C8E97AB0, 16 bytes long.
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{73} normal block at 0x000001E7C8E973D0, 16 bytes long.
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{71} normal block at 0x000001E7C8E97380, 16 bytes long.
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{70} normal block at 0x000001E7C8E96E30, 16 bytes long.
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{69} normal block at 0x000001E7C8E97B00, 16 bytes long.
 Data: <P >&#195;&#246;           > 50 04 3E C3 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001E7C8E97650, 16 bytes long.
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{67} normal block at 0x000001E7C8E976A0, 16 bytes long.
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{66} normal block at 0x000001E7C8E96D90, 16 bytes long.
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{65} normal block at 0x000001E7C8E97880, 16 bytes long.
 Data: <p >&#195;&#246;           > 70 04 3E C3 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001E7C8E97290, 16 bytes long.
 Data: < &#192;<&#195;&#246;           > 18 C0 3C C3 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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