Task 38668105

Name test_684-GPUGRID_TEST_ATM_40STEP_20261023-15-40-RND1343_0
Workunit 31610667
Created 25 Oct 2026, 10:40:32 UTC
Sent 25 Oct 2026, 10:40:38 UTC
Report deadline 30 Oct 2026, 10:40:38 UTC
Received 25 Oct 2026, 12:30:02 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 613450
Run time 27 min 12 sec
CPU time 25 min 29 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 16,492.58 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 737.83 MB
Peak swap size 9.93 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:00:38 (26928): wrapper (7.9.26016): starting
06:00:38 (26928): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
06:00:39 (26928): Library/usr/bin/tar.exe exited; CPU time 0.015625
06:00:39 (26928): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'E:\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'E:\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
06:27:48 (26928): C:/Windows/system32/cmd.exe exited; CPU time 1529.625000
06:27:48 (26928): called boinc_finish(0)
0 bytes in 0 Free Blocks.
176 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 28509473 bytes.
Dumping objects ->
{3835435} normal block at 0x00000146D05C4FB0, 48 bytes long.
 Data: <PATH=E:\BOINC\sl> 50 41 54 48 3D 45 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835424} normal block at 0x00000146D22D75D0, 32 bytes long.
 Data: <HOME=E:\BOINC\sl> 48 4F 4D 45 3D 45 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835413} normal block at 0x00000146D22D6430, 32 bytes long.
 Data: <TMP=E:\BOINC\slo> 54 4D 50 3D 45 3A 5C 42 4F 49 4E 43 5C 73 6C 6F 
{3835402} normal block at 0x00000146D22D6670, 32 bytes long.
 Data: <TEMP=E:\BOINC\sl> 54 45 4D 50 3D 45 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835391} normal block at 0x00000146D22D63D0, 32 bytes long.
 Data: <TMPDIR=E:\BOINC\> 54 4D 50 44 49 52 3D 45 3A 5C 42 4F 49 4E 43 5C 
{3835360} normal block at 0x00000146D05C5250, 48 bytes long.
 Data: <PATH=E:\BOINC\sl> 50 41 54 48 3D 45 3A 5C 42 4F 49 4E 43 5C 73 6C 
..\api\boinc_api.cpp(309) : {3835347} normal block at 0x00000146D05BE1B0, 8 bytes long.
 Data: <   &#208;F   > 00 00 98 D0 46 01 00 00 
{3833963} normal block at 0x00000146D05BD670, 8 bytes long.
 Data: <P&#219;Z&#208;F   > 50 DB 5A D0 46 01 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x00000146D05B27C0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x00000146D05AF060, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x00000146D05C5F10, 16 bytes long.
 Data: <8n\&#208;F           > 38 6E 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000146D05C6140, 16 bytes long.
 Data: < n\&#208;F           > 10 6E 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000146D05BF970, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x00000146D05C6410, 16 bytes long.
 Data: <&#232;m\&#208;F           > E8 6D 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000146D05C5C90, 16 bytes long.
 Data: <&#192;m\&#208;F           > C0 6D 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000146D05C5FB0, 16 bytes long.
 Data: < m\&#208;F           > 98 6D 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000146D05C63C0, 16 bytes long.
 Data: <pm\&#208;F           > 70 6D 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000146D05C5640, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x00000146D05C60F0, 16 bytes long.
 Data: < &#185;Z&#208;F           > 08 B9 5A D0 46 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000146D05BF850, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x00000146D05C5EC0, 16 bytes long.
 Data: <&#224;&#184;Z&#208;F           > E0 B8 5A D0 46 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000146D05C6910, 16 bytes long.
 Data: <&#184;&#184;Z&#208;F           > B8 B8 5A D0 46 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000146D05C6A50, 16 bytes long.
 Data: < &#184;Z&#208;F           > 90 B8 5A D0 46 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000146D05C69B0, 16 bytes long.
 Data: <h&#184;Z&#208;F           > 68 B8 5A D0 46 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000146D05C6A00, 16 bytes long.
 Data: <@&#184;Z&#208;F           > 40 B8 5A D0 46 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000146D05C66E0, 16 bytes long.
 Data: < &#184;Z&#208;F           > 18 B8 5A D0 46 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000146D05BFC10, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x00000146D05C5E20, 16 bytes long.
 Data: <&#240;&#183;Z&#208;F           > F0 B7 5A D0 46 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000146D05AB7F0, 320 bytes long.
 Data: < ^\&#208;F    &#252;[&#208;F   > 20 5E 5C D0 46 01 00 00 10 FC 5B D0 46 01 00 00 
{277} normal block at 0x00000146D05C6550, 16 bytes long.
 Data: <Pm\&#208;F           > 50 6D 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000146D05C6640, 16 bytes long.
 Data: <(m\&#208;F           > 28 6D 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000146D05BFAF0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x00000146D05C6370, 16 bytes long.
 Data: < m\&#208;F           > 00 6D 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000146D05C05D0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x00000146D05C6230, 16 bytes long.
 Data: <Hl\&#208;F           > 48 6C 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000146D05C5F60, 16 bytes long.
 Data: < l\&#208;F           > 20 6C 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000146D05C5BA0, 16 bytes long.
 Data: <&#248;k\&#208;F           > F8 6B 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000146D05C60A0, 16 bytes long.
 Data: <&#208;k\&#208;F           > D0 6B 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000146D05C5D30, 16 bytes long.
 Data: <&#168;k\&#208;F           > A8 6B 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000146D05C6780, 16 bytes long.
 Data: < k\&#208;F           > 80 6B 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000146D05C62D0, 16 bytes long.
 Data: <&#192;R\&#208;F           > C0 52 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000146D05C52C0, 40 bytes long.
 Data: <&#208;b\&#208;F   PR\&#208;F   > D0 62 5C D0 46 01 00 00 50 52 5C D0 46 01 00 00 
{263} normal block at 0x00000146D05C6280, 16 bytes long.
 Data: <`k\&#208;F           > 60 6B 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000146D05C65F0, 16 bytes long.
 Data: <8k\&#208;F           > 38 6B 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000146D05C04B0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x00000146D05C5E70, 16 bytes long.
 Data: < k\&#208;F           > 10 6B 5C D0 46 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000146D05C6B10, 992 bytes long.
 Data: <p^\&#208;F   &#176; \&#208;F   > 70 5E 5C D0 46 01 00 00 B0 04 5C D0 46 01 00 00 
{95} normal block at 0x00000146D05BFDF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x00000146D05BD940, 16 bytes long.
 Data: <@&#233;Z&#208;F           > 40 E9 5A D0 46 01 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x00000146D05AE940, 40 bytes long.
 Data: <@&#217;[&#208;F   &#240;&#253;[&#208;F   > 40 D9 5B D0 46 01 00 00 F0 FD 5B D0 46 01 00 00 
{72} normal block at 0x00000146D05BD850, 16 bytes long.
 Data: < &#234;%c&#246;           > 80 EA 25 63 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000146D05BD580, 16 bytes long.
 Data: <@&#233;%c&#246;           > 40 E9 25 63 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000146D05BDBC0, 16 bytes long.
 Data: <&#248;W"c&#246;           > F8 57 22 63 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000146D05BE0C0, 16 bytes long.
 Data: <&#216;W"c&#246;           > D8 57 22 63 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000146D05BD440, 16 bytes long.
 Data: <P "c&#246;           > 50 04 22 63 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000146D05BDCB0, 16 bytes long.
 Data: <0 "c&#246;           > 30 04 22 63 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000146D05BDAD0, 16 bytes long.
 Data: <&#224; "c&#246;           > E0 02 22 63 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000146D05BD5D0, 16 bytes long.
 Data: <  "c&#246;           > 10 04 22 63 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000146D05BD6C0, 16 bytes long.
 Data: <p "c&#246;           > 70 04 22 63 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000146D05BDC10, 16 bytes long.
 Data: < &#192; c&#246;           > 18 C0 20 63 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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