Task 38667647

Name test_272-GPUGRID_TEST_ATM_40STEP_20261023-16-40-RND0811_0
Workunit 31610251
Created 25 Oct 2026, 8:49:39 UTC
Sent 25 Oct 2026, 8:50:08 UTC
Report deadline 30 Oct 2026, 8:50:08 UTC
Received 25 Oct 2026, 9:19:02 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652843
Run time 25 min 13 sec
CPU time 24 min 20 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 22,198.82 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 739.50 MB
Peak swap size 12.92 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
03:54:09 (14376): wrapper (7.9.26016): starting
03:54:09 (14376): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
03:54:10 (14376): Library/usr/bin/tar.exe exited; CPU time 0.000000
03:54:10 (14376): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
04:18:38 (14376): C:/Windows/system32/cmd.exe exited; CPU time 1460.203125
04:18:38 (14376): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 23061077 bytes.
Dumping objects ->
{3835550} normal block at 0x0000015A726655B0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835539} normal block at 0x0000015A72665AF0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835528} normal block at 0x0000015A72665C40, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835517} normal block at 0x0000015A726659A0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835506} normal block at 0x0000015A72665930, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835475} normal block at 0x0000015A7448CB60, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835464} normal block at 0x0000015A744EE180, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835461} normal block at 0x0000015A7265E880, 8 bytes long.
 Data: <  arZ   > 00 00 61 72 5A 01 00 00 
{3834683} normal block at 0x0000015A744EE0D0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833955} normal block at 0x0000015A7265E970, 8 bytes long.
 Data: < SStZ   > 90 53 53 74 5A 01 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x0000015A72660210, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000015A72655390, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x0000015A72664450, 16 bytes long.
 Data: <hTfrZ           > 68 54 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000015A72664630, 16 bytes long.
 Data: <@TfrZ           > 40 54 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000015A7265EC20, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x0000015A72664720, 16 bytes long.
 Data: < TfrZ           > 18 54 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000015A72664B30, 16 bytes long.
 Data: <&#240;SfrZ           > F0 53 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000015A72664180, 16 bytes long.
 Data: <&#200;SfrZ           > C8 53 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000015A72664FE0, 16 bytes long.
 Data: <&#160;SfrZ           > A0 53 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000015A72665A80, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x0000015A726641D0, 16 bytes long.
 Data: <8&#134;erZ           > 38 86 65 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000015A7265F340, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x0000015A72665080, 16 bytes long.
 Data: < &#134;erZ           > 10 86 65 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000015A72664810, 16 bytes long.
 Data: <&#232;&#133;erZ           > E8 85 65 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000015A72664400, 16 bytes long.
 Data: <&#192;&#133;erZ           > C0 85 65 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000015A72664F90, 16 bytes long.
 Data: < &#133;erZ           > 98 85 65 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000015A726645E0, 16 bytes long.
 Data: <p&#133;erZ           > 70 85 65 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000015A72664E00, 16 bytes long.
 Data: <H&#133;erZ           > 48 85 65 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000015A7265F880, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x0000015A72664270, 16 bytes long.
 Data: < &#133;erZ           > 20 85 65 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000015A72658520, 320 bytes long.
 Data: <pBfrZ    &#248;erZ   > 70 42 66 72 5A 01 00 00 80 F8 65 72 5A 01 00 00 
{273} normal block at 0x0000015A726643B0, 16 bytes long.
 Data: < SfrZ           > 80 53 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000015A72664C20, 16 bytes long.
 Data: <XSfrZ           > 58 53 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000015A7265F640, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x0000015A726642C0, 16 bytes long.
 Data: <0SfrZ           > 30 53 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000015A7265F2E0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x0000015A72665030, 16 bytes long.
 Data: <xRfrZ           > 78 52 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000015A72664DB0, 16 bytes long.
 Data: <PRfrZ           > 50 52 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000015A726644A0, 16 bytes long.
 Data: <(RfrZ           > 28 52 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000015A72664540, 16 bytes long.
 Data: < RfrZ           > 00 52 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000015A72664360, 16 bytes long.
 Data: <&#216;QfrZ           > D8 51 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000015A726650D0, 16 bytes long.
 Data: <&#176;QfrZ           > B0 51 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000015A72664EF0, 16 bytes long.
 Data: < &#227;drZ           > 20 E3 64 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000015A7264E320, 40 bytes long.
 Data: <&#240;NfrZ   `&#203;HtZ   > F0 4E 66 72 5A 01 00 00 60 CB 48 74 5A 01 00 00 
{259} normal block at 0x0000015A72664220, 16 bytes long.
 Data: < QfrZ           > 90 51 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000015A72664EA0, 16 bytes long.
 Data: <hQfrZ           > 68 51 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000015A7265FAC0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x0000015A72664590, 16 bytes long.
 Data: <@QfrZ           > 40 51 66 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000015A72665140, 992 bytes long.
 Data: < EfrZ   &#192;&#250;erZ   > 90 45 66 72 5A 01 00 00 C0 FA 65 72 5A 01 00 00 
{91} normal block at 0x0000015A7265F160, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x0000015A7265E740, 16 bytes long.
 Data: <0&#220;drZ           > 30 DC 64 72 5A 01 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x0000015A7264DC30, 40 bytes long.
 Data: <@&#231;erZ   `&#241;erZ   > 40 E7 65 72 5A 01 00 00 60 F1 65 72 5A 01 00 00 
{68} normal block at 0x0000015A7265E060, 16 bytes long.
 Data: < &#234;2&#181;&#246;           > 80 EA 32 B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000015A7265DBB0, 16 bytes long.
 Data: <@&#233;2&#181;&#246;           > 40 E9 32 B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000015A7265E010, 16 bytes long.
 Data: <&#248;W/&#181;&#246;           > F8 57 2F B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000015A7265E6F0, 16 bytes long.
 Data: <&#216;W/&#181;&#246;           > D8 57 2F B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000015A7265DF70, 16 bytes long.
 Data: <P /&#181;&#246;           > 50 04 2F B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000015A7265E7E0, 16 bytes long.
 Data: <0 /&#181;&#246;           > 30 04 2F B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000015A7265EB00, 16 bytes long.
 Data: <&#224; /&#181;&#246;           > E0 02 2F B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000015A7265E4C0, 16 bytes long.
 Data: <  /&#181;&#246;           > 10 04 2F B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000015A7265E8D0, 16 bytes long.
 Data: <p /&#181;&#246;           > 70 04 2F B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000015A7265DE30, 16 bytes long.
 Data: < &#192;-&#181;&#246;           > 18 C0 2D B5 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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