Task 38667406

Name test_79-GPUGRID_TEST_ATM_40STEP_20261023-14-40-RND2789_1
Workunit 31609985
Created 25 Oct 2026, 7:46:04 UTC
Sent 25 Oct 2026, 7:46:15 UTC
Report deadline 30 Oct 2026, 7:46:15 UTC
Received 25 Oct 2026, 8:47:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 647500
Run time 20 min 18 sec
CPU time 16 min 40 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 44,481.07 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 764.07 MB
Peak swap size 11.52 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
04:29:21 (23724): wrapper (7.9.26016): starting
04:29:21 (23724): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
04:29:22 (23724): Library/usr/bin/tar.exe exited; CPU time 0.015625
04:29:22 (23724): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\28\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\28\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
04:47:15 (23724): C:/Windows/system32/cmd.exe exited; CPU time 1000.640625
04:47:15 (23724): called boinc_finish(0)
0 bytes in 0 Free Blocks.
536 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 23361161 bytes.
Dumping objects ->
{3835525} normal block at 0x000002B2E65C3340, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835514} normal block at 0x000002B2E65C32D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835503} normal block at 0x000002B2E65C2E70, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835492} normal block at 0x000002B2E65C2E00, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835481} normal block at 0x000002B2E65C30A0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835450} normal block at 0x000002B2E8268720, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835439} normal block at 0x000002B2E66283A0, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835436} normal block at 0x000002B2E65BE180, 8 bytes long.
 Data: <  Y&#230;&#178;   > 00 00 59 E6 B2 02 00 00 
{3834686} normal block at 0x000002B2E6628FD0, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x000002B2E65BE130, 8 bytes long.
 Data: < &#234; &#232;&#178;   > 00 EA 17 E8 B2 02 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x000002B2E65B6290, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002B2E65B7450, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x000002B2E65C3820, 16 bytes long.
 Data: < L\&#230;&#178;           > 88 4C 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002B2E65C4450, 16 bytes long.
 Data: <`L\&#230;&#178;           > 60 4C 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002B2E65BF170, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x000002B2E65C4400, 16 bytes long.
 Data: <8L\&#230;&#178;           > 38 4C 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002B2E65C3A00, 16 bytes long.
 Data: < L\&#230;&#178;           > 10 4C 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002B2E65C3FA0, 16 bytes long.
 Data: <&#232;K\&#230;&#178;           > E8 4B 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002B2E65C39B0, 16 bytes long.
 Data: <&#192;K\&#230;&#178;           > C0 4B 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002B2E65C33B0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x000002B2E65C4310, 16 bytes long.
 Data: <(&#166;[&#230;&#178;           > 28 A6 5B E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002B2E65BFC50, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x000002B2E65C3910, 16 bytes long.
 Data: < &#166;[&#230;&#178;           > 00 A6 5B E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002B2E65C3780, 16 bytes long.
 Data: <&#216;&#165;[&#230;&#178;           > D8 A5 5B E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002B2E65C35F0, 16 bytes long.
 Data: <&#176;&#165;[&#230;&#178;           > B0 A5 5B E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002B2E65C4220, 16 bytes long.
 Data: < &#165;[&#230;&#178;           > 88 A5 5B E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002B2E65C41D0, 16 bytes long.
 Data: <`&#165;[&#230;&#178;           > 60 A5 5B E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002B2E65C3E10, 16 bytes long.
 Data: <8&#165;[&#230;&#178;           > 38 A5 5B E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002B2E65BFAD0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x000002B2E65C42C0, 16 bytes long.
 Data: < &#165;[&#230;&#178;           > 10 A5 5B E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002B2E65BA510, 320 bytes long.
 Data: <&#192;B\&#230;&#178;   &#208;&#250;[&#230;&#178;   > C0 42 5C E6 B2 02 00 00 D0 FA 5B E6 B2 02 00 00 
{274} normal block at 0x000002B2E65C3F50, 16 bytes long.
 Data: <&#160;K\&#230;&#178;           > A0 4B 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002B2E65C38C0, 16 bytes long.
 Data: <xK\&#230;&#178;           > 78 4B 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002B2E65BF8F0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x000002B2E65C44A0, 16 bytes long.
 Data: <PK\&#230;&#178;           > 50 4B 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002B2E65BFB90, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x000002B2E65C3A50, 16 bytes long.
 Data: < J\&#230;&#178;           > 98 4A 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002B2E65C3D70, 16 bytes long.
 Data: <pJ\&#230;&#178;           > 70 4A 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002B2E65C4270, 16 bytes long.
 Data: <HJ\&#230;&#178;           > 48 4A 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002B2E65C3B40, 16 bytes long.
 Data: < J\&#230;&#178;           > 20 4A 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002B2E65C3B90, 16 bytes long.
 Data: <&#248;I\&#230;&#178;           > F8 49 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002B2E65C3DC0, 16 bytes long.
 Data: <&#208;I\&#230;&#178;           > D0 49 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002B2E65C3960, 16 bytes long.
 Data: < 1\&#230;&#178;           > 10 31 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002B2E65C3110, 40 bytes long.
 Data: <`9\&#230;&#178;    &#135;&&#232;&#178;   > 60 39 5C E6 B2 02 00 00 20 87 26 E8 B2 02 00 00 
{260} normal block at 0x000002B2E65C43B0, 16 bytes long.
 Data: <&#176;I\&#230;&#178;           > B0 49 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002B2E65C3F00, 16 bytes long.
 Data: < I\&#230;&#178;           > 88 49 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002B2E65BF530, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x000002B2E65C3EB0, 16 bytes long.
 Data: <`I\&#230;&#178;           > 60 49 5C E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002B2E65C4960, 992 bytes long.
 Data: <&#176;>\&#230;&#178;   0&#245;[&#230;&#178;   > B0 3E 5C E6 B2 02 00 00 30 F5 5B E6 B2 02 00 00 
{92} normal block at 0x000002B2E65BEFF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000002B2E65BE040, 16 bytes long.
 Data: < &#253;Z&#230;&#178;           > 80 FD 5A E6 B2 02 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000002B2E65AFD80, 40 bytes long.
 Data: <@&#224;[&#230;&#178;   &#240;&#239;[&#230;&#178;   > 40 E0 5B E6 B2 02 00 00 F0 EF 5B E6 B2 02 00 00 
{69} normal block at 0x000002B2E65BE4A0, 16 bytes long.
 Data: < &#234;&#195;&#150;&#246;           > 80 EA C3 96 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002B2E65BE8B0, 16 bytes long.
 Data: <@&#233;&#195;&#150;&#246;           > 40 E9 C3 96 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002B2E65BE720, 16 bytes long.
 Data: <&#248;W&#192;&#150;&#246;           > F8 57 C0 96 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002B2E65BE900, 16 bytes long.
 Data: <&#216;W&#192;&#150;&#246;           > D8 57 C0 96 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002B2E65BDFA0, 16 bytes long.
 Data: <P &#192;&#150;&#246;           > 50 04 C0 96 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002B2E65BDF50, 16 bytes long.
 Data: <0 &#192;&#150;&#246;           > 30 04 C0 96 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002B2E65BE400, 16 bytes long.
 Data: <&#224; &#192;&#150;&#246;           > E0 02 C0 96 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002B2E65BE090, 16 bytes long.
 Data: <  &#192;&#150;&#246;           > 10 04 C0 96 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002B2E65BEC20, 16 bytes long.
 Data: <p &#192;&#150;&#246;           > 70 04 C0 96 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002B2E65BDEB0, 16 bytes long.
 Data: < &#192;&#190;&#150;&#246;           > 18 C0 BE 96 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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