Task 38667401

Name test_667-GPUGRID_TEST_ATM_40STEP_20261023-13-40-RND8660_0
Workunit 31610032
Created 25 Oct 2026, 7:45:38 UTC
Sent 25 Oct 2026, 7:45:41 UTC
Report deadline 30 Oct 2026, 7:45:41 UTC
Received 25 Oct 2026, 9:45:50 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 640581
Run time 27 min 58 sec
CPU time 27 min 58 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 44,749.87 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 775.77 MB
Peak swap size 13.05 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
10:16:15 (1756): wrapper (7.9.26016): starting
10:16:15 (1756): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
10:16:17 (1756): Library/usr/bin/tar.exe exited; CPU time 0.000000
10:16:17 (1756): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\11\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\11\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
10:44:58 (1756): C:/Windows/system32/cmd.exe exited; CPU time 1678.296875
10:44:58 (1756): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 26742403 bytes.
Dumping objects ->
{3835259} normal block at 0x000001DDCAB5C0B0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835248} normal block at 0x000001DDCAB5BB70, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835237} normal block at 0x000001DDCAB5C5F0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835226} normal block at 0x000001DDCAB5C7B0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835215} normal block at 0x000001DDCAB34CB0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835184} normal block at 0x000001DDCC90AD20, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835173} normal block at 0x000001DDCC91F160, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835170} normal block at 0x000001DDCAB2F7B0, 8 bytes long.
 Data: <  &#254;&#202;&#221;   > 00 00 FE CA DD 01 00 00 
{3834557} normal block at 0x000001DDCC91E710, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000001DDCAB2ED60, 8 bytes long.
 Data: <&#176;&#227; &#204;&#221;   > B0 E3 81 CC DD 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001DDCAB30F10, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001DDCAB26DD0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001DDCAB35E50, 16 bytes long.
 Data: <(h&#179;&#202;&#221;           > 28 68 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001DDCAB36260, 16 bytes long.
 Data: < h&#179;&#202;&#221;           > 00 68 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001DDCAB307E0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001DDCAB35540, 16 bytes long.
 Data: <&#216;g&#179;&#202;&#221;           > D8 67 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001DDCAB361C0, 16 bytes long.
 Data: <&#176;g&#179;&#202;&#221;           > B0 67 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001DDCAB355E0, 16 bytes long.
 Data: < g&#179;&#202;&#221;           > 88 67 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001DDCAB35E00, 16 bytes long.
 Data: <`g&#179;&#202;&#221;           > 60 67 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001DDCAB34E70, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001DDCAB359A0, 16 bytes long.
 Data: <&#232;&#231;&#178;&#202;&#221;           > E8 E7 B2 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001DDCAB30000, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001DDCAB35B30, 16 bytes long.
 Data: <&#192;&#231;&#178;&#202;&#221;           > C0 E7 B2 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001DDCAB35720, 16 bytes long.
 Data: < &#231;&#178;&#202;&#221;           > 98 E7 B2 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001DDCAB36120, 16 bytes long.
 Data: <p&#231;&#178;&#202;&#221;           > 70 E7 B2 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001DDCAB359F0, 16 bytes long.
 Data: <H&#231;&#178;&#202;&#221;           > 48 E7 B2 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001DDCAB36030, 16 bytes long.
 Data: < &#231;&#178;&#202;&#221;           > 20 E7 B2 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001DDCAB36490, 16 bytes long.
 Data: <&#248;&#230;&#178;&#202;&#221;           > F8 E6 B2 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001DDCAB303C0, 32 bytes long.
 Data: <CUDA_DEVICE=1 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 31 00 50 55 
{278} normal block at 0x000001DDCAB35C20, 16 bytes long.
 Data: <&#208;&#230;&#178;&#202;&#221;           > D0 E6 B2 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001DDCAB2E6D0, 320 bytes long.
 Data: < \&#179;&#202;&#221;   &#192; &#179;&#202;&#221;   > 20 5C B3 CA DD 01 00 00 C0 03 B3 CA DD 01 00 00 
{276} normal block at 0x000001DDCAB36300, 16 bytes long.
 Data: <@g&#179;&#202;&#221;           > 40 67 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001DDCAB363A0, 16 bytes long.
 Data: < g&#179;&#202;&#221;           > 18 67 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001DDCAB30360, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001DDCAB35810, 16 bytes long.
 Data: <&#240;f&#179;&#202;&#221;           > F0 66 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001DDCAB2FEE0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001DDCAB35D60, 16 bytes long.
 Data: <8f&#179;&#202;&#221;           > 38 66 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001DDCAB35AE0, 16 bytes long.
 Data: < f&#179;&#202;&#221;           > 10 66 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001DDCAB36210, 16 bytes long.
 Data: <&#232;e&#179;&#202;&#221;           > E8 65 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001DDCAB35DB0, 16 bytes long.
 Data: <&#192;e&#179;&#202;&#221;           > C0 65 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001DDCAB356D0, 16 bytes long.
 Data: < e&#179;&#202;&#221;           > 98 65 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001DDCAB35680, 16 bytes long.
 Data: <pe&#179;&#202;&#221;           > 70 65 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001DDCAB36440, 16 bytes long.
 Data: <0I&#179;&#202;&#221;           > 30 49 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001DDCAB34930, 40 bytes long.
 Data: <@d&#179;&#202;&#221;    &#173; &#204;&#221;   > 40 64 B3 CA DD 01 00 00 20 AD 90 CC DD 01 00 00 
{262} normal block at 0x000001DDCAB358B0, 16 bytes long.
 Data: <Pe&#179;&#202;&#221;           > 50 65 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001DDCAB35590, 16 bytes long.
 Data: <(e&#179;&#202;&#221;           > 28 65 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001DDCAB301E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001DDCAB360D0, 16 bytes long.
 Data: < e&#179;&#202;&#221;           > 00 65 B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001DDCAB36500, 992 bytes long.
 Data: <&#208;`&#179;&#202;&#221;   &#224; &#179;&#202;&#221;   > D0 60 B3 CA DD 01 00 00 E0 01 B3 CA DD 01 00 00 
{94} normal block at 0x000001DDCAB2FDC0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001DDCAB2EB30, 16 bytes long.
 Data: < J&#179;&#202;&#221;           > 80 4A B3 CA DD 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001DDCAB34A80, 40 bytes long.
 Data: <0&#235;&#178;&#202;&#221;   &#192;&#253;&#178;&#202;&#221;   > 30 EB B2 CA DD 01 00 00 C0 FD B2 CA DD 01 00 00 
{71} normal block at 0x000001DDCAB2F800, 16 bytes long.
 Data: < &#234;ML&#247;           > 80 EA 4D 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001DDCAB2F760, 16 bytes long.
 Data: <@&#233;ML&#247;           > 40 E9 4D 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001DDCAB2EFE0, 16 bytes long.
 Data: <&#248;WJL&#247;           > F8 57 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001DDCAB2EF90, 16 bytes long.
 Data: <&#216;WJL&#247;           > D8 57 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001DDCAB2F260, 16 bytes long.
 Data: <P JL&#247;           > 50 04 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001DDCAB2F4E0, 16 bytes long.
 Data: <0 JL&#247;           > 30 04 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001DDCAB2F620, 16 bytes long.
 Data: <&#224; JL&#247;           > E0 02 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001DDCAB2EF40, 16 bytes long.
 Data: <  JL&#247;           > 10 04 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001DDCAB2F5D0, 16 bytes long.
 Data: <p JL&#247;           > 70 04 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001DDCAB2EEF0, 16 bytes long.
 Data: < &#192;HL&#247;           > 18 C0 48 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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