Task 38667192

Name test_338-GPUGRID_TEST_ATM_40STEP_20261023-14-40-RND4968_1
Workunit 31609206
Created 25 Oct 2026, 6:46:49 UTC
Sent 25 Oct 2026, 6:50:08 UTC
Report deadline 30 Oct 2026, 6:50:08 UTC
Received 25 Oct 2026, 10:15:10 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 634205
Run time 1 hours 10 min 36 sec
CPU time 1 hours 8 min 41 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 7,990.82 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 764.93 MB
Peak swap size 12.94 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:05:23 (36128): wrapper (7.9.26016): starting
20:05:23 (36128): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
20:05:24 (36128): Library/usr/bin/tar.exe exited; CPU time 0.000000
20:05:24 (36128): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\3\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
21:14:34 (36128): C:/Windows/system32/cmd.exe exited; CPU time 4121.109375
21:14:34 (36128): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 87392489 bytes.
Dumping objects ->
{3835521} normal block at 0x0000018057A5BB80, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835510} normal block at 0x0000018057A5AFB0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835499} normal block at 0x0000018057A5B8E0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835488} normal block at 0x0000018057A5BAA0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835477} normal block at 0x0000018057A5ADF0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835446} normal block at 0x000001805976BA00, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835433} normal block at 0x0000018057A31680, 8 bytes long.
 Data: <  &#159;W    > 00 00 9F 57 80 01 00 00 
{3833971} normal block at 0x0000018057A31130, 8 bytes long.
 Data: <&#160;&#214;&#165;W    > A0 D6 A5 57 80 01 00 00 
..\zip\boinc_zip.cpp(122) : {317} normal block at 0x0000018057A21690, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x0000018057A20250, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{301} normal block at 0x0000018057A38460, 16 bytes long.
 Data: <&#184;&#139;&#163;W            > B8 8B A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x0000018057A37DD0, 16 bytes long.
 Data: < &#139;&#163;W            > 90 8B A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000018057A30010, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{298} normal block at 0x0000018057A38690, 16 bytes long.
 Data: <h&#139;&#163;W            > 68 8B A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000018057A381E0, 16 bytes long.
 Data: <@&#139;&#163;W            > 40 8B A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000018057A37C90, 16 bytes long.
 Data: < &#139;&#163;W            > 18 8B A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000018057A38820, 16 bytes long.
 Data: <&#240;&#138;&#163;W            > F0 8A A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000018057A2ECA0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{293} normal block at 0x0000018057A37C40, 16 bytes long.
 Data: <x&#185;&#161;W            > 78 B9 A1 57 80 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000018057A2FF50, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{291} normal block at 0x0000018057A38370, 16 bytes long.
 Data: <P&#185;&#161;W            > 50 B9 A1 57 80 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000018057A38320, 16 bytes long.
 Data: <(&#185;&#161;W            > 28 B9 A1 57 80 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000018057A385F0, 16 bytes long.
 Data: < &#185;&#161;W            > 00 B9 A1 57 80 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000018057A37B50, 16 bytes long.
 Data: <&#216;&#184;&#161;W            > D8 B8 A1 57 80 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000018057A38050, 16 bytes long.
 Data: <&#176;&#184;&#161;W            > B0 B8 A1 57 80 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000018057A37A60, 16 bytes long.
 Data: < &#184;&#161;W            > 88 B8 A1 57 80 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000018057A30850, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{283} normal block at 0x0000018057A37A10, 16 bytes long.
 Data: <`&#184;&#161;W            > 60 B8 A1 57 80 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000018057A1B860, 320 bytes long.
 Data: < z&#163;W    P &#163;W    > 10 7A A3 57 80 01 00 00 50 08 A3 57 80 01 00 00 
{281} normal block at 0x0000018057A38730, 16 bytes long.
 Data: <&#208;&#138;&#163;W            > D0 8A A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000018057A384B0, 16 bytes long.
 Data: <&#168;&#138;&#163;W            > A8 8A A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000018057A30190, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{278} normal block at 0x0000018057A385A0, 16 bytes long.
 Data: < &#138;&#163;W            > 80 8A A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000018057A30550, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{276} normal block at 0x0000018057A379C0, 16 bytes long.
 Data: <&#200;&#137;&#163;W            > C8 89 A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000018057A37BF0, 16 bytes long.
 Data: <&#160;&#137;&#163;W            > A0 89 A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000018057A37BA0, 16 bytes long.
 Data: <x&#137;&#163;W            > 78 89 A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000018057A38550, 16 bytes long.
 Data: <P&#137;&#163;W            > 50 89 A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000018057A38000, 16 bytes long.
 Data: <(&#137;&#163;W            > 28 89 A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000018057A378D0, 16 bytes long.
 Data: < &#137;&#163;W            > 00 89 A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000018057A37B00, 16 bytes long.
 Data: <&#176;&#239;&#162;W            > B0 EF A2 57 80 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000018057A2EFB0, 40 bytes long.
 Data: < {&#163;W     &#186;vY    > 00 7B A3 57 80 01 00 00 00 BA 76 59 80 01 00 00 
{267} normal block at 0x0000018057A37CE0, 16 bytes long.
 Data: <&#224; &#163;W            > E0 88 A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000018057A38190, 16 bytes long.
 Data: <&#184; &#163;W            > B8 88 A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000018057A30910, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{264} normal block at 0x0000018057A37FB0, 16 bytes long.
 Data: <  &#163;W            > 90 88 A3 57 80 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000018057A38890, 992 bytes long.
 Data: <&#176; &#163;W     	&#163;W    > B0 7F A3 57 80 01 00 00 10 09 A3 57 80 01 00 00 
{99} normal block at 0x0000018057A308B0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{98} normal block at 0x0000018057A30FA0, 16 bytes long.
 Data: <P&#242;&#162;W            > 50 F2 A2 57 80 01 00 00 00 00 00 00 00 00 00 00 
{97} normal block at 0x0000018057A2F250, 40 bytes long.
 Data: <&#160; &#163;W    &#176; &#163;W    > A0 0F A3 57 80 01 00 00 B0 08 A3 57 80 01 00 00 
{76} normal block at 0x0000018057A31220, 16 bytes long.
 Data: < &#234;s&#183;&#247;           > 80 EA 73 B7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x0000018057A316D0, 16 bytes long.
 Data: <@&#233;s&#183;&#247;           > 40 E9 73 B7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000018057A31090, 16 bytes long.
 Data: <&#248;Wp&#183;&#247;           > F8 57 70 B7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000018057A31450, 16 bytes long.
 Data: <&#216;Wp&#183;&#247;           > D8 57 70 B7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000018057A31DB0, 16 bytes long.
 Data: <P p&#183;&#247;           > 50 04 70 B7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000018057A314A0, 16 bytes long.
 Data: <0 p&#183;&#247;           > 30 04 70 B7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000018057A31810, 16 bytes long.
 Data: <&#224; p&#183;&#247;           > E0 02 70 B7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000018057A315E0, 16 bytes long.
 Data: <  p&#183;&#247;           > 10 04 70 B7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000018057A31860, 16 bytes long.
 Data: <p p&#183;&#247;           > 70 04 70 B7 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000018057A310E0, 16 bytes long.
 Data: < &#192;n&#183;&#247;           > 18 C0 6E B7 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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