Task 38666903

Name test_625-GPUGRID_TEST_ATM_40STEP_20261023-10-40-RND2581_2
Workunit 31609568
Created 25 Oct 2026, 5:23:50 UTC
Sent 25 Oct 2026, 5:28:55 UTC
Report deadline 30 Oct 2026, 5:28:55 UTC
Received 25 Oct 2026, 6:00:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652430
Run time 25 min 19 sec
CPU time 24 min 14 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 31,239.72 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 732.85 MB
Peak swap size 6.93 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
00:35:26 (31588): wrapper (7.9.26016): starting
00:35:26 (31588): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
00:35:27 (31588): Library/usr/bin/tar.exe exited; CPU time 0.000000
00:35:27 (31588): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
01:00:12 (31588): C:/Windows/system32/cmd.exe exited; CPU time 1454.031250
01:00:12 (31588): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 27175317 bytes.
Dumping objects ->
{3835197} normal block at 0x000001FC3ABD2420, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835186} normal block at 0x000001FC3ABD1F50, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835175} normal block at 0x000001FC3ABD1E70, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835164} normal block at 0x000001FC3ABD1D90, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835153} normal block at 0x000001FC3ABD1EE0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835122} normal block at 0x000001FC3AC7D780, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835109} normal block at 0x000001FC390CEBF0, 8 bytes long.
 Data: <  &#165;:&#252;   > 00 00 A5 3A FC 01 00 00 
{3833959} normal block at 0x000001FC390CF5F0, 8 bytes long.
 Data: <&#192;8&#210;:&#252;   > C0 38 D2 3A FC 01 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001FC390D0E90, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001FC390C6BF0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x000001FC390D5950, 16 bytes long.
 Data: <&#200;V 9&#252;           > C8 56 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001FC390D6350, 16 bytes long.
 Data: <&#160;V 9&#252;           > A0 56 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001FC390CFDC0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x000001FC390D6170, 16 bytes long.
 Data: <xV 9&#252;           > 78 56 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001FC390D5900, 16 bytes long.
 Data: <PV 9&#252;           > 50 56 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001FC390D5810, 16 bytes long.
 Data: <(V 9&#252;           > 28 56 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001FC390D5EF0, 16 bytes long.
 Data: < V 9&#252;           > 00 56 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001FC390D36D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x000001FC390D59F0, 16 bytes long.
 Data: <&#200;  9&#252;           > C8 8F 0C 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001FC390CFA00, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x000001FC390D6080, 16 bytes long.
 Data: <&#160;  9&#252;           > A0 8F 0C 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001FC390D5CC0, 16 bytes long.
 Data: <x  9&#252;           > 78 8F 0C 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001FC390D6670, 16 bytes long.
 Data: <P  9&#252;           > 50 8F 0C 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001FC390D62B0, 16 bytes long.
 Data: <(  9&#252;           > 28 8F 0C 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001FC390D61C0, 16 bytes long.
 Data: <   9&#252;           > 00 8F 0C 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001FC390D5BD0, 16 bytes long.
 Data: <&#216;&#142; 9&#252;           > D8 8E 0C 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001FC390CF760, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x000001FC390D5F90, 16 bytes long.
 Data: <&#176;&#142; 9&#252;           > B0 8E 0C 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001FC390C8EB0, 320 bytes long.
 Data: < _ 9&#252;   `&#247; 9&#252;   > 90 5F 0D 39 FC 01 00 00 60 F7 0C 39 FC 01 00 00 
{275} normal block at 0x000001FC390D64E0, 16 bytes long.
 Data: <&#224;U 9&#252;           > E0 55 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001FC390D6620, 16 bytes long.
 Data: <&#184;U 9&#252;           > B8 55 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001FC390CFF40, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x000001FC390D63A0, 16 bytes long.
 Data: < U 9&#252;           > 90 55 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001FC390CFD00, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x000001FC390D66C0, 16 bytes long.
 Data: <&#216;T 9&#252;           > D8 54 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001FC390D6300, 16 bytes long.
 Data: <&#176;T 9&#252;           > B0 54 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001FC390D6760, 16 bytes long.
 Data: < T 9&#252;           > 88 54 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001FC390D5A90, 16 bytes long.
 Data: <`T 9&#252;           > 60 54 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001FC390D6710, 16 bytes long.
 Data: <8T 9&#252;           > 38 54 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001FC390CEFB0, 16 bytes long.
 Data: < T 9&#252;           > 10 54 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001FC390CEF10, 16 bytes long.
 Data: <P: 9&#252;           > 50 3A 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001FC390D3A50, 40 bytes long.
 Data: < &#239; 9&#252;    &#215;&#199;:&#252;   > 10 EF 0C 39 FC 01 00 00 80 D7 C7 3A FC 01 00 00 
{261} normal block at 0x000001FC390CED80, 16 bytes long.
 Data: <&#240;S 9&#252;           > F0 53 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001FC390CEC90, 16 bytes long.
 Data: <&#200;S 9&#252;           > C8 53 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001FC390CFAC0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x000001FC390CF640, 16 bytes long.
 Data: <&#160;S 9&#252;           > A0 53 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001FC390D53A0, 992 bytes long.
 Data: <@&#246; 9&#252;   &#192;&#250; 9&#252;   > 40 F6 0C 39 FC 01 00 00 C0 FA 0C 39 FC 01 00 00 
{93} normal block at 0x000001FC390D04E0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x000001FC390CF0A0, 16 bytes long.
 Data: <@7 9&#252;           > 40 37 0D 39 FC 01 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x000001FC390D3740, 40 bytes long.
 Data: <&#160;&#240; 9&#252;   &#224;  9&#252;   > A0 F0 0C 39 FC 01 00 00 E0 04 0D 39 FC 01 00 00 
{70} normal block at 0x000001FC390CF5A0, 16 bytes long.
 Data: < &#234;w&#222;&#246;           > 80 EA 77 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001FC390CF500, 16 bytes long.
 Data: <@&#233;w&#222;&#246;           > 40 E9 77 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001FC390CE920, 16 bytes long.
 Data: <&#248;Wt&#222;&#246;           > F8 57 74 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001FC390CE7E0, 16 bytes long.
 Data: <&#216;Wt&#222;&#246;           > D8 57 74 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001FC390CF4B0, 16 bytes long.
 Data: <P t&#222;&#246;           > 50 04 74 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001FC390CEC40, 16 bytes long.
 Data: <0 t&#222;&#246;           > 30 04 74 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001FC390CF410, 16 bytes long.
 Data: <&#224; t&#222;&#246;           > E0 02 74 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001FC390CE9C0, 16 bytes long.
 Data: <  t&#222;&#246;           > 10 04 74 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001FC390CE740, 16 bytes long.
 Data: <p t&#222;&#246;           > 70 04 74 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001FC390CF3C0, 16 bytes long.
 Data: < &#192;r&#222;&#246;           > 18 C0 72 DE F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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