Task 38666752

Name test_806-GPUGRID_TEST_ATM_100SAMPLES_20261025-0-1-RND2810_2
Workunit 31608894
Created 25 Oct 2026, 4:37:12 UTC
Sent 25 Oct 2026, 5:06:05 UTC
Report deadline 30 Oct 2026, 5:06:05 UTC
Received 26 Oct 2026, 2:23:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 631047
Run time 20 hours 16 min 53 sec
CPU time 15 hours 4 min 40 sec
Validate state Valid
Credit 600,000.00
Device peak FLOPS 14,933.54 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 759.28 MB
Peak swap size 9.22 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
14:30:53 (7788): wrapper (7.9.26016): starting
14:30:53 (7788): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
14:30:59 (7788): Library/usr/bin/tar.exe exited; CPU time 0.000000
14:30:59 (7788): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
06:19:41 (20012): wrapper (7.9.26016): starting
06:19:41 (20012): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
&#131;T&#131;u&#131;f&#131;B&#131;&#140;&#131;N&#131;g&#131;&#138;&#130;&#220;&#130;&#189;&#130;&#205;&#131;t&#131;@&#131;C&#131;&#139; C:\ProgramData\BOINC\slots\0\tmp &#130;&#205;&#138;&#249;&#130;&#201;&#145;&#182;&#141;&#221;&#130;&#181;&#130;&#220;&#130;&#183;&#129;B
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
11:19:38 (20012): C:/Windows/system32/cmd.exe exited; CPU time 14172.359375
11:19:38 (20012): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 234491846 bytes.
Dumping objects ->
{1813} normal block at 0x0000012737DC4EA0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1802} normal block at 0x0000012737DC4A40, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1791} normal block at 0x0000012737DC4AB0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{1780} normal block at 0x0000012737DC4D50, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1769} normal block at 0x0000012737DC4E30, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{1738} normal block at 0x0000012737DB0310, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {1725} normal block at 0x0000012737DC5E60, 8 bytes long.
 Data: <   7'   > 00 00 D5 37 27 01 00 00 
{303} normal block at 0x0000012737DC5550, 8 bytes long.
 Data: < e 7'   > C0 65 DC 37 27 01 00 00 
{294} normal block at 0x0000012737DAECF0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x0000012737DC54B0, 16 bytes long.
 Data: < d 7'           > C8 64 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000012737DC5820, 16 bytes long.
 Data: < d 7'           > A0 64 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000012737DBFCE0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x0000012737DC5780, 16 bytes long.
 Data: <xd 7'           > 78 64 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000012737DC51E0, 16 bytes long.
 Data: <Pd 7'           > 50 64 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000012737DC5F00, 16 bytes long.
 Data: <(d 7'           > 28 64 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000012737DC5410, 16 bytes long.
 Data: < d 7'           > 00 64 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000012737DC4B20, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x0000012737DC5B40, 16 bytes long.
 Data: <   7'           > A8 8E DB 37 27 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000012737DBFB60, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x0000012737DC5FF0, 16 bytes long.
 Data: <   7'           > 80 8E DB 37 27 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000012737DC5B90, 16 bytes long.
 Data: <X  7'           > 58 8E DB 37 27 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000012737DC5BE0, 16 bytes long.
 Data: <0  7'           > 30 8E DB 37 27 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000012737DC5730, 16 bytes long.
 Data: <   7'           > 08 8E DB 37 27 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000012737DC6130, 16 bytes long.
 Data: <   7'           > E0 8D DB 37 27 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000012737DC58C0, 16 bytes long.
 Data: <   7'           > B8 8D DB 37 27 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000012737DBF800, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x0000012737DC53C0, 16 bytes long.
 Data: <   7'           > 90 8D DB 37 27 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000012737DB8D90, 320 bytes long.
 Data: < S 7'      7'   > C0 53 DC 37 27 01 00 00 00 F8 DB 37 27 01 00 00 
{273} normal block at 0x0000012737DC5690, 16 bytes long.
 Data: < c 7'           > E0 63 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000012737DC5CD0, 16 bytes long.
 Data: < c 7'           > B8 63 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000012737DBF740, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x0000012737DC5E10, 16 bytes long.
 Data: < c 7'           > 90 63 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000012737DC0460, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x0000012737DC5AA0, 16 bytes long.
 Data: < b 7'           > D8 62 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000012737DC5FA0, 16 bytes long.
 Data: < b 7'           > B0 62 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000012737DC5EB0, 16 bytes long.
 Data: < b 7'           > 88 62 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000012737DC5370, 16 bytes long.
 Data: <`b 7'           > 60 62 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000012737DC5460, 16 bytes long.
 Data: <8b 7'           > 38 62 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000012737DC6040, 16 bytes long.
 Data: < b 7'           > 10 62 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000012737DC5320, 16 bytes long.
 Data: < L 7'           > E0 4C DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000012737DC4CE0, 40 bytes long.
 Data: < S 7'      7'   > 20 53 DC 37 27 01 00 00 10 03 DB 37 27 01 00 00 
{259} normal block at 0x0000012737DC55F0, 16 bytes long.
 Data: < a 7'           > F0 61 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000012737DC5640, 16 bytes long.
 Data: < a 7'           > C8 61 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000012737DBF860, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x0000012737DC55A0, 16 bytes long.
 Data: < a 7'           > A0 61 DC 37 27 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000012737DC61A0, 992 bytes long.
 Data: < U 7'   `  7'   > A0 55 DC 37 27 01 00 00 60 F8 DB 37 27 01 00 00 
{91} normal block at 0x0000012737DC0040, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x0000012737DBED40, 16 bytes long.
 Data: <   7'           > D0 D3 DA 37 27 01 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x0000012737DAD3D0, 40 bytes long.
 Data: <@  7'   @  7'   > 40 ED DB 37 27 01 00 00 40 00 DC 37 27 01 00 00 
{66} normal block at 0x0000012737DBF330, 16 bytes long.
 Data: <   `            > 80 EA 88 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000012737DBEA70, 16 bytes long.
 Data: <@  `            > 40 E9 88 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000012737DBE7F0, 16 bytes long.
 Data: < W `            > F8 57 85 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000012737DBEDE0, 16 bytes long.
 Data: < W `            > D8 57 85 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000012737DBE7A0, 16 bytes long.
 Data: <P  `            > 50 04 85 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000012737DBE930, 16 bytes long.
 Data: <0  `            > 30 04 85 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000012737DBF0B0, 16 bytes long.
 Data: <   `            > E0 02 85 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000012737DBF1F0, 16 bytes long.
 Data: <   `            > 10 04 85 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000012737DBE6B0, 16 bytes long.
 Data: <p  `            > 70 04 85 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000012737DBEA20, 16 bytes long.
 Data: <   `            > 18 C0 83 60 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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