Task 38666718

Name test_371-GPUGRID_TEST_ATM_40STEP_20261023-13-40-RND9677_0
Workunit 31609519
Created 25 Oct 2026, 4:28:59 UTC
Sent 25 Oct 2026, 6:33:02 UTC
Report deadline 30 Oct 2026, 6:33:02 UTC
Received 25 Oct 2026, 8:29:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 641350
Run time 28 min 54 sec
CPU time 27 min 38 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 19,410.98 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 723.04 MB
Peak swap size 5.38 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
09:01:34 (10704): wrapper (7.9.26016): starting
09:01:34 (10704): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
09:01:35 (10704): Library/usr/bin/tar.exe exited; CPU time 0.015625
09:01:35 (10704): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
09:29:27 (10704): C:/Windows/system32/cmd.exe exited; CPU time 1658.546875
09:29:27 (10704): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 23552209 bytes.
Dumping objects ->
{3835240} normal block at 0x000002ECBEB35850, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835229} normal block at 0x000002ECBEB35540, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835218} normal block at 0x000002ECBEB35310, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835207} normal block at 0x000002ECBEB35460, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835196} normal block at 0x000002ECBEB35690, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835165} normal block at 0x000002ECC07D8180, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835154} normal block at 0x000002ECC07EF040, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835151} normal block at 0x000002ECBEB2E800, 8 bytes long.
 Data: <  &#240;&#190;&#236;   > 00 00 F0 BE EC 02 00 00 
{3834545} normal block at 0x000002ECC07EF3B0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000002ECBEB2DFE0, 8 bytes long.
 Data: <&#192;&#233;~&#192;&#236;   > C0 E9 7E C0 EC 02 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000002ECBEB31930, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000002ECBEB26890, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000002ECBEB36CA0, 16 bytes long.
 Data: <(q&#179;&#190;&#236;           > 28 71 B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002ECBEB36200, 16 bytes long.
 Data: < q&#179;&#190;&#236;           > 00 71 B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002ECBEB30520, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000002ECBEB36A70, 16 bytes long.
 Data: <&#216;p&#179;&#190;&#236;           > D8 70 B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002ECBEB35F30, 16 bytes long.
 Data: <&#176;p&#179;&#190;&#236;           > B0 70 B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002ECBEB366B0, 16 bytes long.
 Data: < p&#179;&#190;&#236;           > 88 70 B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002ECBEB36B60, 16 bytes long.
 Data: <`p&#179;&#190;&#236;           > 60 70 B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002ECBEB358C0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000002ECBEB367F0, 16 bytes long.
 Data: <&#200;&#248;&#177;&#190;&#236;           > C8 F8 B1 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002ECBEB30580, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000002ECBEB361B0, 16 bytes long.
 Data: <&#160;&#248;&#177;&#190;&#236;           > A0 F8 B1 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002ECBEB36110, 16 bytes long.
 Data: <x&#248;&#177;&#190;&#236;           > 78 F8 B1 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002ECBEB35E90, 16 bytes long.
 Data: <P&#248;&#177;&#190;&#236;           > 50 F8 B1 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002ECBEB36020, 16 bytes long.
 Data: <(&#248;&#177;&#190;&#236;           > 28 F8 B1 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002ECBEB36C00, 16 bytes long.
 Data: < &#248;&#177;&#190;&#236;           > 00 F8 B1 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002ECBEB36250, 16 bytes long.
 Data: <&#216;&#247;&#177;&#190;&#236;           > D8 F7 B1 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002ECBEB2FBC0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000002ECBEB36570, 16 bytes long.
 Data: <&#176;&#247;&#177;&#190;&#236;           > B0 F7 B1 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002ECBEB1F7B0, 320 bytes long.
 Data: <pe&#179;&#190;&#236;   &#192;&#251;&#178;&#190;&#236;   > 70 65 B3 BE EC 02 00 00 C0 FB B2 BE EC 02 00 00 
{276} normal block at 0x000002ECBEB36390, 16 bytes long.
 Data: <@p&#179;&#190;&#236;           > 40 70 B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002ECBEB360C0, 16 bytes long.
 Data: < p&#179;&#190;&#236;           > 18 70 B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002ECBEB2F920, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000002ECBEB36BB0, 16 bytes long.
 Data: <&#240;o&#179;&#190;&#236;           > F0 6F B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002ECBEB30220, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000002ECBEB36D40, 16 bytes long.
 Data: <8o&#179;&#190;&#236;           > 38 6F B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002ECBEB36D90, 16 bytes long.
 Data: < o&#179;&#190;&#236;           > 10 6F B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002ECBEB36890, 16 bytes long.
 Data: <&#232;n&#179;&#190;&#236;           > E8 6E B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002ECBEB35E40, 16 bytes long.
 Data: <&#192;n&#179;&#190;&#236;           > C0 6E B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002ECBEB36520, 16 bytes long.
 Data: < n&#179;&#190;&#236;           > 98 6E B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002ECBEB36160, 16 bytes long.
 Data: <pn&#179;&#190;&#236;           > 70 6E B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002ECBEB36070, 16 bytes long.
 Data: <&#176;U&#179;&#190;&#236;           > B0 55 B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002ECBEB355B0, 40 bytes long.
 Data: <p`&#179;&#190;&#236;     }&#192;&#236;   > 70 60 B3 BE EC 02 00 00 80 81 7D C0 EC 02 00 00 
{262} normal block at 0x000002ECBEB36C50, 16 bytes long.
 Data: <Pn&#179;&#190;&#236;           > 50 6E B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002ECBEB35FD0, 16 bytes long.
 Data: <(n&#179;&#190;&#236;           > 28 6E B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002ECBEB2FCE0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000002ECBEB36430, 16 bytes long.
 Data: < n&#179;&#190;&#236;           > 00 6E B3 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002ECBEB36E00, 992 bytes long.
 Data: <0d&#179;&#190;&#236;   &#224;&#252;&#178;&#190;&#236;   > 30 64 B3 BE EC 02 00 00 E0 FC B2 BE EC 02 00 00 
{94} normal block at 0x000002ECBEB30100, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000002ECBEB2DE00, 16 bytes long.
 Data: < &#200;&#177;&#190;&#236;           > 10 C8 B1 BE EC 02 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000002ECBEB1C810, 40 bytes long.
 Data: < &#222;&#178;&#190;&#236;     &#179;&#190;&#236;   > 00 DE B2 BE EC 02 00 00 00 01 B3 BE EC 02 00 00 
{71} normal block at 0x000002ECBEB2DCC0, 16 bytes long.
 Data: < &#234;7G&#246;           > 80 EA 37 47 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002ECBEB2E260, 16 bytes long.
 Data: <@&#233;7G&#246;           > 40 E9 37 47 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002ECBEB2E4E0, 16 bytes long.
 Data: <&#248;W4G&#246;           > F8 57 34 47 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002ECBEB2E530, 16 bytes long.
 Data: <&#216;W4G&#246;           > D8 57 34 47 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002ECBEB2E1C0, 16 bytes long.
 Data: <P 4G&#246;           > 50 04 34 47 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002ECBEB2E7B0, 16 bytes long.
 Data: <0 4G&#246;           > 30 04 34 47 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002ECBEB2E0D0, 16 bytes long.
 Data: <&#224; 4G&#246;           > E0 02 34 47 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002ECBEB2E580, 16 bytes long.
 Data: <  4G&#246;           > 10 04 34 47 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002ECBEB2E760, 16 bytes long.
 Data: <p 4G&#246;           > 70 04 34 47 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002ECBEB2E210, 16 bytes long.
 Data: < &#192;2G&#246;           > 18 C0 32 47 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra