Task 38666246

Name test_238-GPUGRID_TEST_ATM_40STEP_20261023-0-40-RND1647_1
Workunit 31593130
Created 25 Oct 2026, 2:27:15 UTC
Sent 25 Oct 2026, 4:30:45 UTC
Report deadline 30 Oct 2026, 4:30:45 UTC
Received 25 Oct 2026, 4:48:29 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648120
Run time 17 min
CPU time 15 min 5 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 48,740.91 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 747.87 MB
Peak swap size 13.03 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
05:31:40 (42224): wrapper (7.9.26016): starting
05:31:40 (42224): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
05:31:41 (42224): Library/usr/bin/tar.exe exited; CPU time 0.031250
05:31:41 (42224): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\33\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\33\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
05:47:51 (42224): C:/Windows/system32/cmd.exe exited; CPU time 905.828125
05:47:51 (42224): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 23977537 bytes.
Dumping objects ->
{3835618} normal block at 0x000002F39FE6D4D0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835607} normal block at 0x000002F39FE6CF90, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835596} normal block at 0x000002F39E134B50, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835585} normal block at 0x000002F39E134A00, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835574} normal block at 0x000002F39E134990, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835543} normal block at 0x000002F39FEB6570, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835532} normal block at 0x000002F39FECEDF0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835529} normal block at 0x000002F39E12E910, 8 bytes long.
 Data: <  &#189;&#159;&#243;   > 00 00 BD 9F F3 02 00 00 
{3834721} normal block at 0x000002F39FECED40, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x000002F39E12EA50, 8 bytes long.
 Data: < 3&#241;&#159;&#243;   > 20 33 F1 9F F3 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000002F39E130840, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002F39E126030, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000002F39E135B10, 16 bytes long.
 Data: < h &#158;&#243;           > 08 68 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002F39E1361A0, 16 bytes long.
 Data: <&#224;g &#158;&#243;           > E0 67 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002F39E130130, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000002F39E135980, 16 bytes long.
 Data: <&#184;g &#158;&#243;           > B8 67 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002F39E135930, 16 bytes long.
 Data: < g &#158;&#243;           > 90 67 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002F39E135A70, 16 bytes long.
 Data: <hg &#158;&#243;           > 68 67 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002F39E136060, 16 bytes long.
 Data: <@g &#158;&#243;           > 40 67 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002F39E134AE0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000002F39E1357F0, 16 bytes long.
 Data: < &#181; &#158;&#243;           > 88 B5 11 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002F39E12FD70, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000002F39E135700, 16 bytes long.
 Data: <`&#181; &#158;&#243;           > 60 B5 11 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002F39E135840, 16 bytes long.
 Data: <8&#181; &#158;&#243;           > 38 B5 11 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002F39E136290, 16 bytes long.
 Data: < &#181; &#158;&#243;           > 10 B5 11 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002F39E1356B0, 16 bytes long.
 Data: <&#232;&#180; &#158;&#243;           > E8 B4 11 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002F39E135520, 16 bytes long.
 Data: <&#192;&#180; &#158;&#243;           > C0 B4 11 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002F39E135660, 16 bytes long.
 Data: < &#180; &#158;&#243;           > 98 B4 11 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002F39E130370, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000002F39E136420, 16 bytes long.
 Data: <p&#180; &#158;&#243;           > 70 B4 11 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002F39E11B470, 320 bytes long.
 Data: < d &#158;&#243;   p  &#158;&#243;   > 20 64 13 9E F3 02 00 00 70 03 13 9E F3 02 00 00 
{277} normal block at 0x000002F39E135750, 16 bytes long.
 Data: < g &#158;&#243;           > 20 67 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002F39E1357A0, 16 bytes long.
 Data: <&#248;f &#158;&#243;           > F8 66 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002F39E12FB30, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000002F39E1362E0, 16 bytes long.
 Data: <&#208;f &#158;&#243;           > D0 66 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002F39E12FA10, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000002F39E135570, 16 bytes long.
 Data: < f &#158;&#243;           > 18 66 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002F39E136240, 16 bytes long.
 Data: <&#240;e &#158;&#243;           > F0 65 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002F39E135AC0, 16 bytes long.
 Data: <&#200;e &#158;&#243;           > C8 65 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002F39E1363D0, 16 bytes long.
 Data: <&#160;e &#158;&#243;           > A0 65 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002F39E135890, 16 bytes long.
 Data: <xe &#158;&#243;           > 78 65 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002F39E135A20, 16 bytes long.
 Data: <Pe &#158;&#243;           > 50 65 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002F39E135ED0, 16 bytes long.
 Data: <pJ &#158;&#243;           > 70 4A 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002F39E134A70, 40 bytes long.
 Data: <&#208;^ &#158;&#243;   pe&#235;&#159;&#243;   > D0 5E 13 9E F3 02 00 00 70 65 EB 9F F3 02 00 00 
{263} normal block at 0x000002F39E135DE0, 16 bytes long.
 Data: <0e &#158;&#243;           > 30 65 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002F39E1361F0, 16 bytes long.
 Data: < e &#158;&#243;           > 08 65 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002F39E1305B0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000002F39E135610, 16 bytes long.
 Data: <&#224;d &#158;&#243;           > E0 64 13 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002F39E1364E0, 992 bytes long.
 Data: < V &#158;&#243;   &#176;  &#158;&#243;   > 10 56 13 9E F3 02 00 00 B0 05 13 9E F3 02 00 00 
{95} normal block at 0x000002F39E130430, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000002F39E12E9B0, 16 bytes long.
 Data: < &#239; &#158;&#243;           > 20 EF 11 9E F3 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000002F39E11EF20, 40 bytes long.
 Data: <&#176;&#233; &#158;&#243;   0  &#158;&#243;   > B0 E9 12 9E F3 02 00 00 30 04 13 9E F3 02 00 00 
{72} normal block at 0x000002F39E12F130, 16 bytes long.
 Data: < &#234;&#134;&#200;&#246;           > 80 EA 86 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002F39E12F400, 16 bytes long.
 Data: <@&#233;&#134;&#200;&#246;           > 40 E9 86 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002F39E12EB40, 16 bytes long.
 Data: <&#248;W&#131;&#200;&#246;           > F8 57 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002F39E12EAF0, 16 bytes long.
 Data: <&#216;W&#131;&#200;&#246;           > D8 57 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002F39E12EF00, 16 bytes long.
 Data: <P &#131;&#200;&#246;           > 50 04 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002F39E12EE10, 16 bytes long.
 Data: <0 &#131;&#200;&#246;           > 30 04 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002F39E12EA00, 16 bytes long.
 Data: <&#224; &#131;&#200;&#246;           > E0 02 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002F39E12F040, 16 bytes long.
 Data: <  &#131;&#200;&#246;           > 10 04 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002F39E12E8C0, 16 bytes long.
 Data: <p &#131;&#200;&#246;           > 70 04 83 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002F39E12F360, 16 bytes long.
 Data: < &#192; &#200;&#246;           > 18 C0 81 C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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