Task 38666067

Name test_14-GPUGRID_TEST_ATM_40STEP_20261023-8-40-RND4642_0
Workunit 31609096
Created 25 Oct 2026, 2:01:49 UTC
Sent 25 Oct 2026, 2:12:32 UTC
Report deadline 30 Oct 2026, 2:12:32 UTC
Received 25 Oct 2026, 3:45:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 617663
Run time 30 min 24 sec
CPU time 28 min 31 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 15,394.34 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 714.16 MB
Peak swap size 6.86 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
22:14:31 (19544): wrapper (7.9.26016): starting
22:14:31 (19544): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
22:14:32 (19544): Library/usr/bin/tar.exe exited; CPU time 0.015625
22:14:32 (19544): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'F:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'F:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:44:39 (19544): C:/Windows/system32/cmd.exe exited; CPU time 1711.843750
22:44:39 (19544): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 37178063 bytes.
Dumping objects ->
{3835194} normal block at 0x00000222D07A9910, 48 bytes long.
 Data: <PATH=F:\ProgramD> 50 41 54 48 3D 46 3A 5C 50 72 6F 67 72 61 6D 44 
{3835183} normal block at 0x00000222CEBD5410, 48 bytes long.
 Data: <HOME=F:\ProgramD> 48 4F 4D 45 3D 46 3A 5C 50 72 6F 67 72 61 6D 44 
{3835172} normal block at 0x00000222CEBD59C0, 48 bytes long.
 Data: <TMP=F:\ProgramDa> 54 4D 50 3D 46 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835161} normal block at 0x00000222CEBD58E0, 48 bytes long.
 Data: <TEMP=F:\ProgramD> 54 45 4D 50 3D 46 3A 5C 50 72 6F 67 72 61 6D 44 
{3835150} normal block at 0x00000222CEBD5A30, 48 bytes long.
 Data: <TMPDIR=F:\Progra> 54 4D 50 44 49 52 3D 46 3A 5C 50 72 6F 67 72 61 
{3835119} normal block at 0x00000222D07B9940, 64 bytes long.
 Data: <PATH=F:\ProgramD> 50 41 54 48 3D 46 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835106} normal block at 0x00000222CEBCEFA0, 8 bytes long.
 Data: <  &#238;&#206;"   > 00 00 EE CE 22 02 00 00 
{3833959} normal block at 0x00000222CEBCED20, 8 bytes long.
 Data: < &#138;z&#208;"   > 00 8A 7A D0 22 02 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x00000222CEBC6AD0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000222CEBC82D0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x00000222CEBD6720, 16 bytes long.
 Data: <Hd&#189;&#206;"           > 48 64 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000222CEBD6590, 16 bytes long.
 Data: < d&#189;&#206;"           > 20 64 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000222CEBD14C0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x00000222CEBD6BD0, 16 bytes long.
 Data: <&#248;c&#189;&#206;"           > F8 63 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000222CEBD73F0, 16 bytes long.
 Data: <&#208;c&#189;&#206;"           > D0 63 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000222CEBD6DB0, 16 bytes long.
 Data: <&#168;c&#189;&#206;"           > A8 63 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000222CEBD74E0, 16 bytes long.
 Data: < c&#189;&#206;"           > 80 63 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000222CEBD5330, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x00000222CEBD6950, 16 bytes long.
 Data: <h&#206;&#187;&#206;"           > 68 CE BB CE 22 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000222CEBD0B00, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x00000222CEBD66D0, 16 bytes long.
 Data: <@&#206;&#187;&#206;"           > 40 CE BB CE 22 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000222CEBD67C0, 16 bytes long.
 Data: < &#206;&#187;&#206;"           > 18 CE BB CE 22 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000222CEBD6F40, 16 bytes long.
 Data: <&#240;&#205;&#187;&#206;"           > F0 CD BB CE 22 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000222CEBD6A40, 16 bytes long.
 Data: <&#200;&#205;&#187;&#206;"           > C8 CD BB CE 22 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000222CEBD69F0, 16 bytes long.
 Data: <&#160;&#205;&#187;&#206;"           > A0 CD BB CE 22 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000222CEBD73A0, 16 bytes long.
 Data: <x&#205;&#187;&#206;"           > 78 CD BB CE 22 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000222CEBD10A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x00000222CEBD6E50, 16 bytes long.
 Data: <P&#205;&#187;&#206;"           > 50 CD BB CE 22 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000222CEBBCD50, 320 bytes long.
 Data: <Pn&#189;&#206;"   &#160; &#189;&#206;"   > 50 6E BD CE 22 02 00 00 A0 10 BD CE 22 02 00 00 
{275} normal block at 0x00000222CEBD6770, 16 bytes long.
 Data: <`c&#189;&#206;"           > 60 63 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000222CEBD7260, 16 bytes long.
 Data: <8c&#189;&#206;"           > 38 63 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000222CEBD1040, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x00000222CEBD7350, 16 bytes long.
 Data: < c&#189;&#206;"           > 10 63 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000222CEBD1460, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x00000222CEBD7490, 16 bytes long.
 Data: <Xb&#189;&#206;"           > 58 62 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000222CEBD6680, 16 bytes long.
 Data: <0b&#189;&#206;"           > 30 62 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000222CEBD6900, 16 bytes long.
 Data: < b&#189;&#206;"           > 08 62 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000222CEBD6630, 16 bytes long.
 Data: <&#224;a&#189;&#206;"           > E0 61 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000222CEBD65E0, 16 bytes long.
 Data: <&#184;a&#189;&#206;"           > B8 61 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000222CEBCEB40, 16 bytes long.
 Data: < a&#189;&#206;"           > 90 61 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000222CEBCF6D0, 16 bytes long.
 Data: <&#240;T&#189;&#206;"           > F0 54 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000222CEBD54F0, 40 bytes long.
 Data: <&#208;&#246;&#188;&#206;"   @ {&#208;"   > D0 F6 BC CE 22 02 00 00 40 99 7B D0 22 02 00 00 
{261} normal block at 0x00000222CEBCE9B0, 16 bytes long.
 Data: <pa&#189;&#206;"           > 70 61 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000222CEBCF040, 16 bytes long.
 Data: <Ha&#189;&#206;"           > 48 61 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000222CEBD1340, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x00000222CEBCEE60, 16 bytes long.
 Data: < a&#189;&#206;"           > 20 61 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000222CEBD6120, 992 bytes long.
 Data: <`&#238;&#188;&#206;"   @ &#189;&#206;"   > 60 EE BC CE 22 02 00 00 40 13 BD CE 22 02 00 00 
{93} normal block at 0x00000222CEBD0DA0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x00000222CEBCEF50, 16 bytes long.
 Data: <PY&#189;&#206;"           > 50 59 BD CE 22 02 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x00000222CEBD5950, 40 bytes long.
 Data: <P&#239;&#188;&#206;"   &#160; &#189;&#206;"   > 50 EF BC CE 22 02 00 00 A0 0D BD CE 22 02 00 00 
{70} normal block at 0x00000222CEBCEF00, 16 bytes long.
 Data: < &#234;&&#250;&#247;           > 80 EA 26 FA F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000222CEBCF5E0, 16 bytes long.
 Data: <@&#233;&&#250;&#247;           > 40 E9 26 FA F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000222CEBCF220, 16 bytes long.
 Data: <&#248;W#&#250;&#247;           > F8 57 23 FA F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000222CEBCF680, 16 bytes long.
 Data: <&#216;W#&#250;&#247;           > D8 57 23 FA F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000222CEBCF590, 16 bytes long.
 Data: <P #&#250;&#247;           > 50 04 23 FA F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000222CEBCF900, 16 bytes long.
 Data: <0 #&#250;&#247;           > 30 04 23 FA F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000222CEBCEC80, 16 bytes long.
 Data: <&#224; #&#250;&#247;           > E0 02 23 FA F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000222CEBCEBE0, 16 bytes long.
 Data: <  #&#250;&#247;           > 10 04 23 FA F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000222CEBCEAA0, 16 bytes long.
 Data: <p #&#250;&#247;           > 70 04 23 FA F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000222CEBCEEB0, 16 bytes long.
 Data: < &#192;!&#250;&#247;           > 18 C0 21 FA F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra