Task 38665285

Name test_559-GPUGRID_TEST_ATM_100SAMPLES_20261025-0-1-RND7430_0
Workunit 31608393
Created 25 Oct 2026, 0:58:31 UTC
Sent 25 Oct 2026, 1:02:44 UTC
Report deadline 30 Oct 2026, 1:02:44 UTC
Received 25 Oct 2026, 23:16:37 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 626877
Run time 3 hours 32 min
CPU time 3 hours 22 min 18 sec
Validate state Valid
Credit 600,000.00
Device peak FLOPS 35,915.31 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 708.17 MB
Peak swap size 6.93 GB
Peak disk usage 2.97 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
15:44:20 (18428): wrapper (7.9.26016): starting
15:44:20 (18428): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
15:44:22 (18428): Library/usr/bin/tar.exe exited; CPU time 0.015625
15:44:22 (18428): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\13\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\13\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
19:15:58 (18428): C:/Windows/system32/cmd.exe exited; CPU time 12138.046875
19:15:58 (18428): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 263843647 bytes.
Dumping objects ->
{3835213} normal block at 0x00000249EC8B51B0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835202} normal block at 0x00000249EC8B5530, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835191} normal block at 0x00000249EC8B54C0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835180} normal block at 0x00000249EC8B5920, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835169} normal block at 0x00000249EC8B5A00, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835138} normal block at 0x00000249EC7DC880, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835125} normal block at 0x00000249EAAFE0D0, 8 bytes long.
 Data: <  &#247;&#234;I   > 00 00 F7 EA 49 02 00 00 
{3833963} normal block at 0x00000249EAAFD9A0, 8 bytes long.
 Data: < &#228;g&#236;I   > 80 E4 67 EC 49 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x00000249EAB00CA0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x00000249EAAF66B0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x00000249EAB06060, 16 bytes long.
 Data: <Hi&#176;&#234;I           > 48 69 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000249EAB05CA0, 16 bytes long.
 Data: < i&#176;&#234;I           > 20 69 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000249EAAFF690, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x00000249EAB06010, 16 bytes long.
 Data: <&#248;h&#176;&#234;I           > F8 68 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000249EAB05C50, 16 bytes long.
 Data: <&#208;h&#176;&#234;I           > D0 68 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000249EAB05F20, 16 bytes long.
 Data: <&#168;h&#176;&#234;I           > A8 68 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000249EAB061A0, 16 bytes long.
 Data: < h&#176;&#234;I           > 80 68 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000249EAB04030, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x00000249EAB05BB0, 16 bytes long.
 Data: < &#182;&#174;&#234;I           > 18 B6 AE EA 49 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000249EAAFF7B0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x00000249EAB05ED0, 16 bytes long.
 Data: <&#240;&#181;&#174;&#234;I           > F0 B5 AE EA 49 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000249EAB05E80, 16 bytes long.
 Data: <&#200;&#181;&#174;&#234;I           > C8 B5 AE EA 49 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000249EAB05A70, 16 bytes long.
 Data: <&#160;&#181;&#174;&#234;I           > A0 B5 AE EA 49 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000249EAB05980, 16 bytes long.
 Data: <x&#181;&#174;&#234;I           > 78 B5 AE EA 49 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000249EAB058E0, 16 bytes long.
 Data: <P&#181;&#174;&#234;I           > 50 B5 AE EA 49 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000249EAB05FC0, 16 bytes long.
 Data: <(&#181;&#174;&#234;I           > 28 B5 AE EA 49 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000249EAAFF2D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x00000249EAB05D90, 16 bytes long.
 Data: < &#181;&#174;&#234;I           > 00 B5 AE EA 49 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000249EAAEB500, 320 bytes long.
 Data: < ]&#176;&#234;I   &#208;&#242;&#175;&#234;I   > 90 5D B0 EA 49 02 00 00 D0 F2 AF EA 49 02 00 00 
{277} normal block at 0x00000249EAB05700, 16 bytes long.
 Data: <`h&#176;&#234;I           > 60 68 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000249EAB064C0, 16 bytes long.
 Data: <8h&#176;&#234;I           > 38 68 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000249EAAFF870, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x00000249EAB05840, 16 bytes long.
 Data: < h&#176;&#234;I           > 10 68 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000249EAAFEC70, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x00000249EAB05B60, 16 bytes long.
 Data: <Xg&#176;&#234;I           > 58 67 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000249EAB056B0, 16 bytes long.
 Data: <0g&#176;&#234;I           > 30 67 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000249EAB05E30, 16 bytes long.
 Data: < g&#176;&#234;I           > 08 67 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000249EAB05AC0, 16 bytes long.
 Data: <&#224;f&#176;&#234;I           > E0 66 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000249EAB05890, 16 bytes long.
 Data: <&#184;f&#176;&#234;I           > B8 66 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000249EAB06330, 16 bytes long.
 Data: < f&#176;&#234;I           > 90 66 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000249EAB05C00, 16 bytes long.
 Data: <&#208;;&#176;&#234;I           > D0 3B B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000249EAB03BD0, 40 bytes long.
 Data: < \&#176;&#234;I    &#200;}&#236;I   > 00 5C B0 EA 49 02 00 00 80 C8 7D EC 49 02 00 00 
{263} normal block at 0x00000249EAB05B10, 16 bytes long.
 Data: <pf&#176;&#234;I           > 70 66 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000249EAB06380, 16 bytes long.
 Data: <Hf&#176;&#234;I           > 48 66 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000249EAAFF330, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x00000249EAB057F0, 16 bytes long.
 Data: < f&#176;&#234;I           > 20 66 B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000249EAB06620, 992 bytes long.
 Data: <&#240;W&#176;&#234;I   0&#243;&#175;&#234;I   > F0 57 B0 EA 49 02 00 00 30 F3 AF EA 49 02 00 00 
{95} normal block at 0x00000249EAAFEB50, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x00000249EAAFD900, 16 bytes long.
 Data: <P?&#176;&#234;I           > 50 3F B0 EA 49 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x00000249EAB03F50, 40 bytes long.
 Data: < &#217;&#175;&#234;I   P&#235;&#175;&#234;I   > 00 D9 AF EA 49 02 00 00 50 EB AF EA 49 02 00 00 
{72} normal block at 0x00000249EAAFDC70, 16 bytes long.
 Data: < &#234; |&#247;           > 80 EA 1E 7C F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000249EAAFD540, 16 bytes long.
 Data: <@&#233; |&#247;           > 40 E9 1E 7C F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000249EAAFD4F0, 16 bytes long.
 Data: <&#248;W |&#247;           > F8 57 1B 7C F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000249EAAFE080, 16 bytes long.
 Data: <&#216;W |&#247;           > D8 57 1B 7C F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000249EAAFD860, 16 bytes long.
 Data: <P  |&#247;           > 50 04 1B 7C F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000249EAAFD770, 16 bytes long.
 Data: <0  |&#247;           > 30 04 1B 7C F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000249EAAFDB80, 16 bytes long.
 Data: <&#224;  |&#247;           > E0 02 1B 7C F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000249EAAFD400, 16 bytes long.
 Data: <   |&#247;           > 10 04 1B 7C F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000249EAAFD8B0, 16 bytes long.
 Data: <p  |&#247;           > 70 04 1B 7C F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000249EAAFDEF0, 16 bytes long.
 Data: < &#192; |&#247;           > 18 C0 19 7C F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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