Task 38665125

Name test_890-GPUGRID_TEST_ATM_40STEP_20261023-7-40-RND1008_0
Workunit 31608245
Created 25 Oct 2026, 0:41:29 UTC
Sent 25 Oct 2026, 0:46:28 UTC
Report deadline 30 Oct 2026, 0:46:28 UTC
Received 25 Oct 2026, 6:14:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 640581
Run time 29 min 12 sec
CPU time 29 min 12 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 44,749.87 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 770.37 MB
Peak swap size 13.03 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
06:43:08 (16416): wrapper (7.9.26016): starting
06:43:08 (16416): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
06:43:09 (16416): Library/usr/bin/tar.exe exited; CPU time 0.015625
06:43:09 (16416): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\17\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\17\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
07:13:08 (16416): C:/Windows/system32/cmd.exe exited; CPU time 1752.937500
07:13:08 (16416): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 27595785 bytes.
Dumping objects ->
{3835259} normal block at 0x0000019B2454BE10, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835248} normal block at 0x0000019B2454C3C0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835237} normal block at 0x0000019B2454C900, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835226} normal block at 0x0000019B2454C350, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835215} normal block at 0x0000019B24524BD0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835184} normal block at 0x0000019B262272A0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835173} normal block at 0x0000019B2623EF50, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835170} normal block at 0x0000019B2451EE00, 8 bytes long.
 Data: <  M$&#155;   > 00 00 4D 24 9B 01 00 00 
{3834557} normal block at 0x0000019B2623EEA0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x0000019B2451EF90, 8 bytes long.
 Data: <&#176;&#227; &&#155;   > B0 E3 13 26 9B 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x0000019B24521410, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000019B245168C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x0000019B24525EA0, 16 bytes long.
 Data: <(hR$&#155;           > 28 68 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000019B24525B80, 16 bytes long.
 Data: < hR$&#155;           > 00 68 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000019B24520480, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x0000019B24525630, 16 bytes long.
 Data: <&#216;gR$&#155;           > D8 67 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000019B24525DB0, 16 bytes long.
 Data: <&#176;gR$&#155;           > B0 67 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000019B245263A0, 16 bytes long.
 Data: < gR$&#155;           > 88 67 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000019B24525900, 16 bytes long.
 Data: <`gR$&#155;           > 60 67 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000019B24524B60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x0000019B24526350, 16 bytes long.
 Data: <&#232;&#231;Q$&#155;           > E8 E7 51 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000019B24520120, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x0000019B24525FE0, 16 bytes long.
 Data: <&#192;&#231;Q$&#155;           > C0 E7 51 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000019B24525C70, 16 bytes long.
 Data: < &#231;Q$&#155;           > 98 E7 51 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000019B24526300, 16 bytes long.
 Data: <p&#231;Q$&#155;           > 70 E7 51 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000019B24525E50, 16 bytes long.
 Data: <H&#231;Q$&#155;           > 48 E7 51 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000019B24526260, 16 bytes long.
 Data: < &#231;Q$&#155;           > 20 E7 51 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000019B24526490, 16 bytes long.
 Data: <&#248;&#230;Q$&#155;           > F8 E6 51 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000019B245200C0, 32 bytes long.
 Data: <CUDA_DEVICE=1 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 31 00 50 55 
{278} normal block at 0x0000019B245261C0, 16 bytes long.
 Data: <&#208;&#230;Q$&#155;           > D0 E6 51 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000019B2451E6D0, 320 bytes long.
 Data: <&#192;aR$&#155;   &#192; R$&#155;   > C0 61 52 24 9B 01 00 00 C0 00 52 24 9B 01 00 00 
{276} normal block at 0x0000019B24525D60, 16 bytes long.
 Data: <@gR$&#155;           > 40 67 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000019B24526170, 16 bytes long.
 Data: < gR$&#155;           > 18 67 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000019B245207E0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x0000019B24525C20, 16 bytes long.
 Data: <&#240;fR$&#155;           > F0 66 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000019B245205A0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x0000019B24525F90, 16 bytes long.
 Data: <8fR$&#155;           > 38 66 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000019B24525BD0, 16 bytes long.
 Data: < fR$&#155;           > 10 66 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000019B245262B0, 16 bytes long.
 Data: <&#232;eR$&#155;           > E8 65 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000019B24525E00, 16 bytes long.
 Data: <&#192;eR$&#155;           > C0 65 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000019B24526120, 16 bytes long.
 Data: < eR$&#155;           > 98 65 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000019B24526440, 16 bytes long.
 Data: <peR$&#155;           > 70 65 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000019B24526030, 16 bytes long.
 Data: < MR$&#155;           > 90 4D 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000019B24524D90, 40 bytes long.
 Data: <0`R$&#155;   &#160;r"&&#155;   > 30 60 52 24 9B 01 00 00 A0 72 22 26 9B 01 00 00 
{262} normal block at 0x0000019B245260D0, 16 bytes long.
 Data: <PeR$&#155;           > 50 65 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000019B24525680, 16 bytes long.
 Data: <(eR$&#155;           > 28 65 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000019B245204E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x0000019B24526080, 16 bytes long.
 Data: < eR$&#155;           > 00 65 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000019B24526500, 992 bytes long.
 Data: < `R$&#155;   &#224; R$&#155;   > 80 60 52 24 9B 01 00 00 E0 04 52 24 9B 01 00 00 
{94} normal block at 0x0000019B2451FB80, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x0000019B2451ED60, 16 bytes long.
 Data: < NR$&#155;           > 00 4E 52 24 9B 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x0000019B24524E00, 40 bytes long.
 Data: <`&#237;Q$&#155;    &#251;Q$&#155;   > 60 ED 51 24 9B 01 00 00 80 FB 51 24 9B 01 00 00 
{71} normal block at 0x0000019B2451EAE0, 16 bytes long.
 Data: < &#234;ML&#247;           > 80 EA 4D 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000019B2451F0D0, 16 bytes long.
 Data: <@&#233;ML&#247;           > 40 E9 4D 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000019B2451F210, 16 bytes long.
 Data: <&#248;WJL&#247;           > F8 57 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000019B2451F300, 16 bytes long.
 Data: <&#216;WJL&#247;           > D8 57 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000019B2451F2B0, 16 bytes long.
 Data: <P JL&#247;           > 50 04 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000019B2451F620, 16 bytes long.
 Data: <0 JL&#247;           > 30 04 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000019B2451EC70, 16 bytes long.
 Data: <&#224; JL&#247;           > E0 02 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000019B2451EF40, 16 bytes long.
 Data: <  JL&#247;           > 10 04 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000019B2451F530, 16 bytes long.
 Data: <p JL&#247;           > 70 04 4A 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000019B2451F850, 16 bytes long.
 Data: < &#192;HL&#247;           > 18 C0 48 4C F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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