Task 38664735

Name test_129-GPUGRID_TEST_ATM_40STEP_20261023-9-40-RND3328_0
Workunit 31607864
Created 24 Oct 2026, 23:58:25 UTC
Sent 24 Oct 2026, 23:58:31 UTC
Report deadline 29 Oct 2026, 23:58:31 UTC
Received 25 Oct 2026, 0:19:29 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 636179
Run time 19 min 29 sec
CPU time 18 min 16 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 50,491.95 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 751.14 MB
Peak swap size 10.03 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
02:00:25 (40840): wrapper (7.9.26016): starting
02:00:25 (40840): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
02:00:26 (40840): Library/usr/bin/tar.exe exited; CPU time 0.000000
02:00:26 (40840): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
02:18:59 (40840): C:/Windows/system32/cmd.exe exited; CPU time 1096.281250
02:18:59 (40840): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 20965513 bytes.
Dumping objects ->
{3835481} normal block at 0x0000023C08D54230, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835470} normal block at 0x0000023C07025820, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835459} normal block at 0x0000023C070255F0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835448} normal block at 0x0000023C07025900, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835437} normal block at 0x0000023C07025430, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835406} normal block at 0x0000023C08CC8A20, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835395} normal block at 0x0000023C0707E870, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835392} normal block at 0x0000023C07020ED0, 8 bytes long.
 Data: <  K <   > 00 00 4B 07 3C 02 00 00 
{3834669} normal block at 0x0000023C0707DDE0, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x0000023C07020B60, 8 bytes long.
 Data: < &#224;  <   > 90 E0 00 07 3C 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x0000023C07017500, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000023C07017750, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x0000023C070266A0, 16 bytes long.
 Data: <hq  <           > 68 71 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000023C07026AB0, 16 bytes long.
 Data: <@q  <           > 40 71 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000023C0701E9A0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x0000023C070267E0, 16 bytes long.
 Data: < q  <           > 18 71 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000023C07026B00, 16 bytes long.
 Data: <&#240;p  <           > F0 70 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000023C070263D0, 16 bytes long.
 Data: <&#200;p  <           > C8 70 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000023C07026240, 16 bytes long.
 Data: <&#160;p  <           > A0 70 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000023C070254A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x0000023C07026150, 16 bytes long.
 Data: <8   <           > 38 03 01 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000023C0701EB20, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x0000023C07026380, 16 bytes long.
 Data: <    <           > 10 03 01 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000023C07026790, 16 bytes long.
 Data: <&#232;   <           > E8 02 01 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000023C07026DD0, 16 bytes long.
 Data: <&#192;   <           > C0 02 01 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000023C07026100, 16 bytes long.
 Data: <    <           > 98 02 01 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000023C07026560, 16 bytes long.
 Data: <p   <           > 70 02 01 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000023C07026A60, 16 bytes long.
 Data: <H   <           > 48 02 01 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000023C0701EAC0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x0000023C07026A10, 16 bytes long.
 Data: <    <           > 20 02 01 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000023C07010220, 320 bytes long.
 Data: < j  <   &#192;&#234;  <   > 10 6A 02 07 3C 02 00 00 C0 EA 01 07 3C 02 00 00 
{277} normal block at 0x0000023C07026740, 16 bytes long.
 Data: < p  <           > 80 70 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000023C07026BF0, 16 bytes long.
 Data: <Xp  <           > 58 70 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000023C0701EE20, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x0000023C07026BA0, 16 bytes long.
 Data: <0p  <           > 30 70 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000023C0701F540, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x0000023C07026060, 16 bytes long.
 Data: <xo  <           > 78 6F 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000023C07026330, 16 bytes long.
 Data: <Po  <           > 50 6F 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000023C07026010, 16 bytes long.
 Data: <(o  <           > 28 6F 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000023C07026920, 16 bytes long.
 Data: < o  <           > 00 6F 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000023C070260B0, 16 bytes long.
 Data: <&#216;n  <           > D8 6E 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000023C070269C0, 16 bytes long.
 Data: <&#176;n  <           > B0 6E 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000023C07026D80, 16 bytes long.
 Data: <&#224;R  <           > E0 52 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000023C070252E0, 40 bytes long.
 Data: < m  <    &#138;&#204; <   > 80 6D 02 07 3C 02 00 00 20 8A CC 08 3C 02 00 00 
{263} normal block at 0x0000023C070266F0, 16 bytes long.
 Data: < n  <           > 90 6E 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000023C070264C0, 16 bytes long.
 Data: <hn  <           > 68 6E 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000023C0701EA60, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x0000023C07025FC0, 16 bytes long.
 Data: <@n  <           > 40 6E 02 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000023C07026E40, 992 bytes long.
 Data: <&#192;_  <   `&#234;  <   > C0 5F 02 07 3C 02 00 00 60 EA 01 07 3C 02 00 00 
{95} normal block at 0x0000023C0701EB80, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x0000023C070212E0, 16 bytes long.
 Data: < &#238;  <           > 80 EE 00 07 3C 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x0000023C0700EE80, 40 bytes long.
 Data: <&#224;   <    &#235;  <   > E0 12 02 07 3C 02 00 00 80 EB 01 07 3C 02 00 00 
{72} normal block at 0x0000023C070215B0, 16 bytes long.
 Data: < &#234;pR&#246;           > 80 EA 70 52 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000023C070216A0, 16 bytes long.
 Data: <@&#233;pR&#246;           > 40 E9 70 52 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000023C070209D0, 16 bytes long.
 Data: <&#248;WmR&#246;           > F8 57 6D 52 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000023C070216F0, 16 bytes long.
 Data: <&#216;WmR&#246;           > D8 57 6D 52 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000023C07020980, 16 bytes long.
 Data: <P mR&#246;           > 50 04 6D 52 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000023C07020B10, 16 bytes long.
 Data: <0 mR&#246;           > 30 04 6D 52 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000023C07020E30, 16 bytes long.
 Data: <&#224; mR&#246;           > E0 02 6D 52 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000023C07021830, 16 bytes long.
 Data: <  mR&#246;           > 10 04 6D 52 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000023C07021600, 16 bytes long.
 Data: <p mR&#246;           > 70 04 6D 52 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000023C07020A70, 16 bytes long.
 Data: < &#192;kR&#246;           > 18 C0 6B 52 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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