Task 38663775

Name test_479-GPUGRID_TEST_ATM_40STEP_20261023-7-40-RND8676_0
Workunit 31606969
Created 24 Oct 2026, 22:39:58 UTC
Sent 24 Oct 2026, 22:39:59 UTC
Report deadline 29 Oct 2026, 22:39:59 UTC
Received 24 Oct 2026, 23:11:01 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 613630
Run time 28 min 46 sec
CPU time 24 min 36 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 106,061.87 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 744.73 MB
Peak swap size 7.23 GB
Peak disk usage 3.11 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
15:42:17 (2296): wrapper (7.9.26016): starting
15:42:17 (2296): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
15:42:19 (2296): Library/usr/bin/tar.exe exited; CPU time 0.015625
15:42:19 (2296): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
16:10:29 (2296): C:/Windows/system32/cmd.exe exited; CPU time 1476.546875
16:10:29 (2296): called boinc_finish(0)
0 bytes in 0 Free Blocks.
566 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 22726521 bytes.
Dumping objects ->
{3835577} normal block at 0x0000027DF8773090, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835566} normal block at 0x0000027DF69C45A0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835555} normal block at 0x0000027DF69C44C0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835544} normal block at 0x0000027DF69C4300, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835533} normal block at 0x0000027DF69C43E0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835502} normal block at 0x0000027DF869CA90, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835491} normal block at 0x0000027DF8610810, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835488} normal block at 0x0000027DF69BD7E0, 8 bytes long.
 Data: <  &#249;&#246;}   > 00 00 F9 F6 7D 02 00 00 
{3834707} normal block at 0x0000027DF8610730, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833969} normal block at 0x0000027DF69BCCA0, 8 bytes long.
 Data: <&#192; w&#248;}   > C0 1F 77 F8 7D 02 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x0000027DF69C0CA0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x0000027DF69B5C50, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x0000027DF69C5290, 16 bytes long.
 Data: <(`&#156;&#246;}           > 28 60 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000027DF69C5150, 16 bytes long.
 Data: < `&#156;&#246;}           > 00 60 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000027DF69BE9F0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x0000027DF69C4FC0, 16 bytes long.
 Data: <&#216;_&#156;&#246;}           > D8 5F 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000027DF69C4F20, 16 bytes long.
 Data: <&#176;_&#156;&#246;}           > B0 5F 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000027DF69C5650, 16 bytes long.
 Data: < _&#156;&#246;}           > 88 5F 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000027DF69C5AB0, 16 bytes long.
 Data: <`_&#156;&#246;}           > 60 5F 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000027DF69C4760, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x0000027DF69C5240, 16 bytes long.
 Data: <&#168;&#241;&#154;&#246;}           > A8 F1 9A F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000027DF69BEAB0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x0000027DF69C5060, 16 bytes long.
 Data: < &#241;&#154;&#246;}           > 80 F1 9A F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000027DF69C4ED0, 16 bytes long.
 Data: <X&#241;&#154;&#246;}           > 58 F1 9A F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000027DF69C51F0, 16 bytes long.
 Data: <0&#241;&#154;&#246;}           > 30 F1 9A F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000027DF69C50B0, 16 bytes long.
 Data: < &#241;&#154;&#246;}           > 08 F1 9A F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000027DF69C5470, 16 bytes long.
 Data: <&#224;&#240;&#154;&#246;}           > E0 F0 9A F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000027DF69C5920, 16 bytes long.
 Data: <&#184;&#240;&#154;&#246;}           > B8 F0 9A F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000027DF69BEDB0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x0000027DF69C5510, 16 bytes long.
 Data: < &#240;&#154;&#246;}           > 90 F0 9A F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000027DF69AF090, 320 bytes long.
 Data: < U&#156;&#246;}   &#176;&#237;&#155;&#246;}   > 10 55 9C F6 7D 02 00 00 B0 ED 9B F6 7D 02 00 00 
{280} normal block at 0x0000027DF69C4E80, 16 bytes long.
 Data: <@_&#156;&#246;}           > 40 5F 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000027DF69C5100, 16 bytes long.
 Data: < _&#156;&#246;}           > 18 5F 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000027DF69BEFF0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x0000027DF69C5A10, 16 bytes long.
 Data: <&#240;^&#156;&#246;}           > F0 5E 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000027DF69BE7B0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x0000027DF69C5880, 16 bytes long.
 Data: <8^&#156;&#246;}           > 38 5E 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000027DF69C5330, 16 bytes long.
 Data: < ^&#156;&#246;}           > 10 5E 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000027DF69C51A0, 16 bytes long.
 Data: <&#232;]&#156;&#246;}           > E8 5D 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000027DF69C54C0, 16 bytes long.
 Data: <&#192;]&#156;&#246;}           > C0 5D 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000027DF69C58D0, 16 bytes long.
 Data: < ]&#156;&#246;}           > 98 5D 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000027DF69C5A60, 16 bytes long.
 Data: <p]&#156;&#246;}           > 70 5D 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000027DF69C5010, 16 bytes long.
 Data: <&#240;F&#156;&#246;}           > F0 46 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000027DF69C46F0, 40 bytes long.
 Data: < P&#156;&#246;}    &#202;i&#248;}   > 10 50 9C F6 7D 02 00 00 90 CA 69 F8 7D 02 00 00 
{266} normal block at 0x0000027DF69C56A0, 16 bytes long.
 Data: <P]&#156;&#246;}           > 50 5D 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000027DF69C4D90, 16 bytes long.
 Data: <(]&#156;&#246;}           > 28 5D 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000027DF69BEB70, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x0000027DF69C4F70, 16 bytes long.
 Data: < ]&#156;&#246;}           > 00 5D 9C F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000027DF69C5D00, 992 bytes long.
 Data: <pO&#156;&#246;}   p&#235;&#155;&#246;}   > 70 4F 9C F6 7D 02 00 00 70 EB 9B F6 7D 02 00 00 
{98} normal block at 0x0000027DF69BED50, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x0000027DF69BD510, 16 bytes long.
 Data: < &#214;&#154;&#246;}           > 90 D6 9A F6 7D 02 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x0000027DF69AD690, 40 bytes long.
 Data: < &#213;&#155;&#246;}   P&#237;&#155;&#246;}   > 10 D5 9B F6 7D 02 00 00 50 ED 9B F6 7D 02 00 00 
{75} normal block at 0x0000027DF69BCB10, 16 bytes long.
 Data: < &#234;  &#246;           > 80 EA 81 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000027DF69BCE30, 16 bytes long.
 Data: <@&#233;  &#246;           > 40 E9 81 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000027DF69BD650, 16 bytes long.
 Data: <&#248;W~ &#246;           > F8 57 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000027DF69BD790, 16 bytes long.
 Data: <&#216;W~ &#246;           > D8 57 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000027DF69BCE80, 16 bytes long.
 Data: <P ~ &#246;           > 50 04 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000027DF69BD5B0, 16 bytes long.
 Data: <0 ~ &#246;           > 30 04 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000027DF69BD060, 16 bytes long.
 Data: <&#224; ~ &#246;           > E0 02 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000027DF69BCED0, 16 bytes long.
 Data: <  ~ &#246;           > 10 04 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000027DF69BD1F0, 16 bytes long.
 Data: <p ~ &#246;           > 70 04 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000027DF69BD600, 16 bytes long.
 Data: < &#192;| &#246;           > 18 C0 7C 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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