Task 38663370

Name test_956-GPUGRID_TEST_ATM_40STEP_20261023-5-40-RND5900_0
Workunit 31606581
Created 24 Oct 2026, 21:52:12 UTC
Sent 24 Oct 2026, 21:52:19 UTC
Report deadline 29 Oct 2026, 21:52:19 UTC
Received 24 Oct 2026, 22:56:38 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 628466
Run time 58 min 38 sec
CPU time 48 min 24 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 49,324.59 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 732.33 MB
Peak swap size 7.00 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
14:53:53 (5192): wrapper (7.9.26016): starting
14:53:53 (5192): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
14:53:59 (5192): Library/usr/bin/tar.exe exited; CPU time 0.062500
14:53:59 (5192): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
15:55:56 (5192): C:/Windows/system32/cmd.exe exited; CPU time 2904.656250
15:55:56 (5192): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 47244201 bytes.
Dumping objects ->
{3835561} normal block at 0x00000234EC0DD420, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835550} normal block at 0x00000234EA4F47D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835539} normal block at 0x00000234EA4F4760, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835528} normal block at 0x00000234EA4F4680, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835517} normal block at 0x00000234EA4F4D80, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835486} normal block at 0x00000234EC129D00, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835475} normal block at 0x00000234EC13F020, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835472} normal block at 0x00000234EA4EEB00, 8 bytes long.
 Data: <  &#146;&#234;4   > 00 00 92 EA 34 02 00 00 
{3834691} normal block at 0x00000234EC13E520, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x00000234EA4EEC90, 8 bytes long.
 Data: < I &#236;4   > 90 49 18 EC 34 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x00000234EA4F09E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x00000234EA4E6680, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x00000234EA4F5880, 16 bytes long.
 Data: <xeO&#234;4           > 78 65 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000234EA4F5380, 16 bytes long.
 Data: <PeO&#234;4           > 50 65 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000234EA4EF930, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x00000234EA4F54C0, 16 bytes long.
 Data: <(eO&#234;4           > 28 65 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000234EA4F59C0, 16 bytes long.
 Data: < eO&#234;4           > 00 65 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000234EA4F5F60, 16 bytes long.
 Data: <&#216;dO&#234;4           > D8 64 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000234EA4F5290, 16 bytes long.
 Data: <&#176;dO&#234;4           > B0 64 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000234EA4F4990, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x00000234EA4F5B50, 16 bytes long.
 Data: <X&#230;N&#234;4           > 58 E6 4E EA 34 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000234EA4EF8D0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x00000234EA4F6190, 16 bytes long.
 Data: <0&#230;N&#234;4           > 30 E6 4E EA 34 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000234EA4F5CE0, 16 bytes long.
 Data: < &#230;N&#234;4           > 08 E6 4E EA 34 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000234EA4F5E70, 16 bytes long.
 Data: <&#224;&#229;N&#234;4           > E0 E5 4E EA 34 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000234EA4F5BA0, 16 bytes long.
 Data: <&#184;&#229;N&#234;4           > B8 E5 4E EA 34 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000234EA4F61E0, 16 bytes long.
 Data: < &#229;N&#234;4           > 90 E5 4E EA 34 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000234EA4F57E0, 16 bytes long.
 Data: <h&#229;N&#234;4           > 68 E5 4E EA 34 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000234EA4EFED0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x00000234EA4F5470, 16 bytes long.
 Data: <@&#229;N&#234;4           > 40 E5 4E EA 34 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000234EA4EE540, 320 bytes long.
 Data: <pTO&#234;4   &#208;&#254;N&#234;4   > 70 54 4F EA 34 02 00 00 D0 FE 4E EA 34 02 00 00 
{277} normal block at 0x00000234EA4F5970, 16 bytes long.
 Data: < dO&#234;4           > 90 64 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000234EA4F5330, 16 bytes long.
 Data: <hdO&#234;4           > 68 64 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000234EA4F02F0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x00000234EA4F5920, 16 bytes long.
 Data: <@dO&#234;4           > 40 64 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000234EA4EFFF0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x00000234EA4F5EC0, 16 bytes long.
 Data: < cO&#234;4           > 88 63 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000234EA4F5600, 16 bytes long.
 Data: <`cO&#234;4           > 60 63 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000234EA4F5E20, 16 bytes long.
 Data: <8cO&#234;4           > 38 63 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000234EA4F5420, 16 bytes long.
 Data: < cO&#234;4           > 10 63 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000234EA4F58D0, 16 bytes long.
 Data: <&#232;bO&#234;4           > E8 62 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000234EA4F5510, 16 bytes long.
 Data: <&#192;bO&#234;4           > C0 62 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000234EA4F52E0, 16 bytes long.
 Data: <PKO&#234;4           > 50 4B 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000234EA4F4B50, 40 bytes long.
 Data: <&#224;RO&#234;4      &#236;4   > E0 52 4F EA 34 02 00 00 00 9D 12 EC 34 02 00 00 
{263} normal block at 0x00000234EA4F5DD0, 16 bytes long.
 Data: <&#160;bO&#234;4           > A0 62 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000234EA4F5D80, 16 bytes long.
 Data: <xbO&#234;4           > 78 62 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000234EA4EFE10, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x00000234EA4F60A0, 16 bytes long.
 Data: <PbO&#234;4           > 50 62 4F EA 34 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000234EA4F6250, 992 bytes long.
 Data: <&#160;`O&#234;4    &#254;N&#234;4   > A0 60 4F EA 34 02 00 00 10 FE 4E EA 34 02 00 00 
{95} normal block at 0x00000234EA4EFC90, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x00000234EA4EF5A0, 16 bytes long.
 Data: <0&#229;M&#234;4           > 30 E5 4D EA 34 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x00000234EA4DE530, 40 bytes long.
 Data: <&#160;&#245;N&#234;4    &#252;N&#234;4   > A0 F5 4E EA 34 02 00 00 90 FC 4E EA 34 02 00 00 
{72} normal block at 0x00000234EA4EECE0, 16 bytes long.
 Data: < &#234;^~&#247;           > 80 EA 5E 7E F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000234EA4EF0A0, 16 bytes long.
 Data: <@&#233;^~&#247;           > 40 E9 5E 7E F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000234EA4EE920, 16 bytes long.
 Data: <&#248;W[~&#247;           > F8 57 5B 7E F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000234EA4EED80, 16 bytes long.
 Data: <&#216;W[~&#247;           > D8 57 5B 7E F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000234EA4EEF10, 16 bytes long.
 Data: <P [~&#247;           > 50 04 5B 7E F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000234EA4EF550, 16 bytes long.
 Data: <0 [~&#247;           > 30 04 5B 7E F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000234EA4EF280, 16 bytes long.
 Data: <&#224; [~&#247;           > E0 02 5B 7E F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000234EA4EF690, 16 bytes long.
 Data: <  [~&#247;           > 10 04 5B 7E F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000234EA4EEBF0, 16 bytes long.
 Data: <p [~&#247;           > 70 04 5B 7E F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000234EA4EF0F0, 16 bytes long.
 Data: < &#192;Y~&#247;           > 18 C0 59 7E F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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