Task 38663240

Name test_343-GPUGRID_TEST_ATM_40STEP_20261023-9-40-RND3436_0
Workunit 31606462
Created 24 Oct 2026, 21:36:07 UTC
Sent 24 Oct 2026, 21:36:13 UTC
Report deadline 29 Oct 2026, 21:36:13 UTC
Received 24 Oct 2026, 22:12:18 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 613630
Run time 27 min 52 sec
CPU time 23 min 49 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 106,061.87 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 738.83 MB
Peak swap size 7.22 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
14:44:09 (17696): wrapper (7.9.26016): starting
14:44:09 (17696): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
14:44:11 (17696): Library/usr/bin/tar.exe exited; CPU time 0.000000
14:44:11 (17696): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
15:11:33 (17696): C:/Windows/system32/cmd.exe exited; CPU time 1429.187500
15:11:33 (17696): called boinc_finish(0)
0 bytes in 0 Free Blocks.
566 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 22177747 bytes.
Dumping objects ->
{3835577} normal block at 0x0000012CF5C6C4D0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835566} normal block at 0x0000012CF5C45E40, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835555} normal block at 0x0000012CF5C45DD0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835544} normal block at 0x0000012CF5C46380, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835533} normal block at 0x0000012CF5C45D60, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835502} normal block at 0x0000012CF78AC260, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835491} normal block at 0x0000012CF5D14220, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835488} normal block at 0x0000012CF5C3FFD0, 8 bytes long.
 Data: <  _&#247;,   > 00 00 5F F7 2C 01 00 00 
{3834707} normal block at 0x0000012CF5D137A0, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833969} normal block at 0x0000012CF5C3F620, 8 bytes long.
 Data: < s&#147;&#247;,   > 80 73 93 F7 2C 01 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x0000012CF5C48540, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x0000012CF5C37B90, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x0000012CF5C47020, 16 bytes long.
 Data: <xw&#196;&#245;,           > 78 77 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000012CF5C464E0, 16 bytes long.
 Data: <Pw&#196;&#245;,           > 50 77 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000012CF5C41B60, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x0000012CF5C469E0, 16 bytes long.
 Data: <(w&#196;&#245;,           > 28 77 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000012CF5C46B20, 16 bytes long.
 Data: < w&#196;&#245;,           > 00 77 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000012CF5C47250, 16 bytes long.
 Data: <&#216;v&#196;&#245;,           > D8 76 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000012CF5C46C10, 16 bytes long.
 Data: <&#176;v&#196;&#245;,           > B0 76 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000012CF5C46150, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x0000012CF5C46C60, 16 bytes long.
 Data: < &#169;&#195;&#245;,           > 98 A9 C3 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000012CF5C41260, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x0000012CF5C46FD0, 16 bytes long.
 Data: <p&#169;&#195;&#245;,           > 70 A9 C3 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000012CF5C46530, 16 bytes long.
 Data: <H&#169;&#195;&#245;,           > 48 A9 C3 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000012CF5C46990, 16 bytes long.
 Data: < &#169;&#195;&#245;,           > 20 A9 C3 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000012CF5C46490, 16 bytes long.
 Data: <&#248;&#168;&#195;&#245;,           > F8 A8 C3 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000012CF5C46850, 16 bytes long.
 Data: <&#208;&#168;&#195;&#245;,           > D0 A8 C3 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000012CF5C46E90, 16 bytes long.
 Data: <&#168;&#168;&#195;&#245;,           > A8 A8 C3 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000012CF5C40F60, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x0000012CF5C46940, 16 bytes long.
 Data: < &#168;&#195;&#245;,           > 80 A8 C3 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000012CF5C3A880, 320 bytes long.
 Data: <@i&#196;&#245;,   ` &#196;&#245;,   > 40 69 C4 F5 2C 01 00 00 60 0F C4 F5 2C 01 00 00 
{280} normal block at 0x0000012CF5C471B0, 16 bytes long.
 Data: < v&#196;&#245;,           > 90 76 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000012CF5C46E40, 16 bytes long.
 Data: <hv&#196;&#245;,           > 68 76 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000012CF5C40F00, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x0000012CF5C47390, 16 bytes long.
 Data: <@v&#196;&#245;,           > 40 76 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000012CF5C41320, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x0000012CF5C46F80, 16 bytes long.
 Data: < u&#196;&#245;,           > 88 75 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000012CF5C47160, 16 bytes long.
 Data: <`u&#196;&#245;,           > 60 75 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000012CF5C473E0, 16 bytes long.
 Data: <8u&#196;&#245;,           > 38 75 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000012CF5C472A0, 16 bytes long.
 Data: < u&#196;&#245;,           > 10 75 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000012CF5C468A0, 16 bytes long.
 Data: <&#232;t&#196;&#245;,           > E8 74 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000012CF5C467B0, 16 bytes long.
 Data: <&#192;t&#196;&#245;,           > C0 74 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000012CF5C46800, 16 bytes long.
 Data: <&#176;^&#196;&#245;,           > B0 5E C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000012CF5C45EB0, 40 bytes long.
 Data: < h&#196;&#245;,   `&#194;&#138;&#247;,   > 00 68 C4 F5 2C 01 00 00 60 C2 8A F7 2C 01 00 00 
{266} normal block at 0x0000012CF5C47200, 16 bytes long.
 Data: <&#160;t&#196;&#245;,           > A0 74 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000012CF5C46620, 16 bytes long.
 Data: <xt&#196;&#245;,           > 78 74 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000012CF5C416E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x0000012CF5C46D00, 16 bytes long.
 Data: <Pt&#196;&#245;,           > 50 74 C4 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000012CF5C47450, 992 bytes long.
 Data: < m&#196;&#245;,   &#224; &#196;&#245;,   > 00 6D C4 F5 2C 01 00 00 E0 16 C4 F5 2C 01 00 00 
{98} normal block at 0x0000012CF5C414A0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x0000012CF5C3FB20, 16 bytes long.
 Data: <P&#233;&#194;&#245;,           > 50 E9 C2 F5 2C 01 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x0000012CF5C2E950, 40 bytes long.
 Data: < &#251;&#195;&#245;,   &#160; &#196;&#245;,   > 20 FB C3 F5 2C 01 00 00 A0 14 C4 F5 2C 01 00 00 
{75} normal block at 0x0000012CF5C3FF80, 16 bytes long.
 Data: < &#234;  &#246;           > 80 EA 81 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000012CF5C3FCB0, 16 bytes long.
 Data: <@&#233;  &#246;           > 40 E9 81 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000012CF5C3F3F0, 16 bytes long.
 Data: <&#248;W~ &#246;           > F8 57 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000012CF5C3F760, 16 bytes long.
 Data: <&#216;W~ &#246;           > D8 57 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000012CF5C40160, 16 bytes long.
 Data: <P ~ &#246;           > 50 04 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000012CF5C3FC60, 16 bytes long.
 Data: <0 ~ &#246;           > 30 04 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000012CF5C400C0, 16 bytes long.
 Data: <&#224; ~ &#246;           > E0 02 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000012CF5C3F800, 16 bytes long.
 Data: <  ~ &#246;           > 10 04 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000012CF5C3F350, 16 bytes long.
 Data: <p ~ &#246;           > 70 04 7E 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000012CF5C3FE90, 16 bytes long.
 Data: < &#192;| &#246;           > 18 C0 7C 0D F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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