Task 38662382

Name test_159-GPUGRID_TEST_ATM_40STEP_20261023-1-40-RND0686_0
Workunit 31605643
Created 24 Oct 2026, 18:54:20 UTC
Sent 24 Oct 2026, 18:54:31 UTC
Report deadline 29 Oct 2026, 18:54:31 UTC
Received 25 Oct 2026, 1:07:08 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654840
Run time 1 hours 31 min 17 sec
CPU time 1 hours 22 min 17 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 6,029.85 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 742.36 MB
Peak swap size 8.40 GB
Peak disk usage 3.77 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
17:38:00 (31684): wrapper (7.9.26016): starting
17:38:00 (31684): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:38:01 (31684): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:38:01 (31684): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
19:05:44 (31684): C:/Windows/system32/cmd.exe exited; CPU time 4937.703125
19:05:44 (31684): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 154312209 bytes.
Dumping objects ->
{3835485} normal block at 0x0000026385414170, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835474} normal block at 0x0000026385414100, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835463} normal block at 0x0000026385414020, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835452} normal block at 0x0000026385413CA0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835441} normal block at 0x0000026385413C30, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835410} normal block at 0x000002638774D860, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835397} normal block at 0x0000026385409580, 8 bytes long.
 Data: <  :&#133;c   > 00 00 3A 85 63 02 00 00 
{3833949} normal block at 0x00000263854093A0, 8 bytes long.
 Data: <P&#201;C&#133;c   > 50 C9 43 85 63 02 00 00 
..\zip\boinc_zip.cpp(122) : {306} normal block at 0x0000026385405040, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002638540E850, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{290} normal block at 0x0000026385414990, 16 bytes long.
 Data: <(WA&#133;c           > 28 57 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000026385414620, 16 bytes long.
 Data: < WA&#133;c           > 00 57 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000263854101C0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{287} normal block at 0x0000026385414CB0, 16 bytes long.
 Data: <&#216;VA&#133;c           > D8 56 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000026385414940, 16 bytes long.
 Data: <&#176;VA&#133;c           > B0 56 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000026385414490, 16 bytes long.
 Data: < VA&#133;c           > 88 56 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000026385414EE0, 16 bytes long.
 Data: <`VA&#133;c           > 60 56 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000026385414250, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{282} normal block at 0x0000026385415160, 16 bytes long.
 Data: <x&#244;?&#133;c           > 78 F4 3F 85 63 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000026385410580, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{280} normal block at 0x0000026385414D00, 16 bytes long.
 Data: <P&#244;?&#133;c           > 50 F4 3F 85 63 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000026385414DF0, 16 bytes long.
 Data: <(&#244;?&#133;c           > 28 F4 3F 85 63 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000026385414440, 16 bytes long.
 Data: < &#244;?&#133;c           > 00 F4 3F 85 63 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000263854147B0, 16 bytes long.
 Data: <&#216;&#243;?&#133;c           > D8 F3 3F 85 63 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000026385415340, 16 bytes long.
 Data: <&#176;&#243;?&#133;c           > B0 F3 3F 85 63 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000026385414C10, 16 bytes long.
 Data: < &#243;?&#133;c           > 88 F3 3F 85 63 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000263854102E0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{272} normal block at 0x0000026385414E40, 16 bytes long.
 Data: <`&#243;?&#133;c           > 60 F3 3F 85 63 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000263853FF360, 320 bytes long.
 Data: <@NA&#133;c   &#224; A&#133;c   > 40 4E 41 85 63 02 00 00 E0 02 41 85 63 02 00 00 
{270} normal block at 0x0000026385414B70, 16 bytes long.
 Data: <@VA&#133;c           > 40 56 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000026385414F80, 16 bytes long.
 Data: < VA&#133;c           > 18 56 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000026385410460, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{267} normal block at 0x00000263854148F0, 16 bytes long.
 Data: <&#240;UA&#133;c           > F0 55 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002638540F800, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{265} normal block at 0x00000263854152A0, 16 bytes long.
 Data: <8UA&#133;c           > 38 55 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000026385414850, 16 bytes long.
 Data: < UA&#133;c           > 10 55 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000026385414800, 16 bytes long.
 Data: <&#232;TA&#133;c           > E8 54 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000026385414760, 16 bytes long.
 Data: <&#192;TA&#133;c           > C0 54 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000026385415250, 16 bytes long.
 Data: < TA&#133;c           > 98 54 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000263854149E0, 16 bytes long.
 Data: <pTA&#133;c           > 70 54 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000026385415390, 16 bytes long.
 Data: <&#224;AA&#133;c           > E0 41 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000263854141E0, 40 bytes long.
 Data: < SA&#133;c   `&#216;t&#135;c   > 90 53 41 85 63 02 00 00 60 D8 74 87 63 02 00 00 
{256} normal block at 0x0000026385414AD0, 16 bytes long.
 Data: <PTA&#133;c           > 50 54 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000026385415200, 16 bytes long.
 Data: <(TA&#133;c           > 28 54 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x000002638540FEC0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{253} normal block at 0x00000263854150C0, 16 bytes long.
 Data: < TA&#133;c           > 00 54 41 85 63 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x0000026385415400, 992 bytes long.
 Data: <&#192;PA&#133;c   &#192;&#254;@&#133;c   > C0 50 41 85 63 02 00 00 C0 FE 40 85 63 02 00 00 
{88} normal block at 0x000002638540FCE0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{87} normal block at 0x0000026385409440, 16 bytes long.
 Data: < &#216;?&#133;c           > 80 D8 3F 85 63 02 00 00 00 00 00 00 00 00 00 00 
{86} normal block at 0x00000263853FD880, 40 bytes long.
 Data: <@&#148;@&#133;c   &#224;&#252;@&#133;c   > 40 94 40 85 63 02 00 00 E0 FC 40 85 63 02 00 00 
{65} normal block at 0x0000026385409DA0, 16 bytes long.
 Data: < &#234;&#226;&#214;&#246;           > 80 EA E2 D6 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000026385409A80, 16 bytes long.
 Data: <@&#233;&#226;&#214;&#246;           > 40 E9 E2 D6 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000026385409760, 16 bytes long.
 Data: <&#248;W&#223;&#214;&#246;           > F8 57 DF D6 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000263854092B0, 16 bytes long.
 Data: <&#216;W&#223;&#214;&#246;           > D8 57 DF D6 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000026385408FE0, 16 bytes long.
 Data: <P &#223;&#214;&#246;           > 50 04 DF D6 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000026385409B20, 16 bytes long.
 Data: <0 &#223;&#214;&#246;           > 30 04 DF D6 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000026385409350, 16 bytes long.
 Data: <&#224; &#223;&#214;&#246;           > E0 02 DF D6 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000026385409260, 16 bytes long.
 Data: <  &#223;&#214;&#246;           > 10 04 DF D6 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000026385409080, 16 bytes long.
 Data: <p &#223;&#214;&#246;           > 70 04 DF D6 F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x0000026385408F40, 16 bytes long.
 Data: < &#192;&#221;&#214;&#246;           > 18 C0 DD D6 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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