Task 38660979

Name test_773-GPUGRID_TEST_ATM_4STEP_20261023-3-4-RND3259_1
Workunit 31604218
Created 24 Oct 2026, 15:01:38 UTC
Sent 24 Oct 2026, 15:11:10 UTC
Report deadline 29 Oct 2026, 15:11:10 UTC
Received 24 Oct 2026, 18:29:39 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654854
Run time 32 min 49 sec
CPU time 32 min 19 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 12,741.16 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 742.27 MB
Peak swap size 12.90 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
11:46:11 (20200): wrapper (7.9.26016): starting
11:46:11 (20200): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
11:46:12 (20200): Library/usr/bin/tar.exe exited; CPU time 0.000000
11:46:12 (20200): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
12:18:33 (20200): C:/Windows/system32/cmd.exe exited; CPU time 1939.281250
12:18:33 (20200): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 29550447 bytes.
Dumping objects ->
{3835546} normal block at 0x00000147EAF0AA20, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835535} normal block at 0x00000147EAEE5AA0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835524} normal block at 0x00000147EAEE59C0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835513} normal block at 0x00000147EAEE5950, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835502} normal block at 0x00000147EAEE5870, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835471} normal block at 0x00000147ECBB6190, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835460} normal block at 0x00000147ECBCF5E0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835457} normal block at 0x00000147EAEDF370, 8 bytes long.
 Data: <  :&#235;G   > 00 00 3A EB 47 01 00 00 
{3834682} normal block at 0x00000147ECBCFA00, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x00000147EAEDF320, 8 bytes long.
 Data: <@n&#193;&#236;G   > 40 6E C1 EC 47 01 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x00000147EAEE12F0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000147EAED67B0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x00000147EAEE6FF0, 16 bytes long.
 Data: < s&#238;&#234;G           > 88 73 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000147EAEE68C0, 16 bytes long.
 Data: <`s&#238;&#234;G           > 60 73 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000147EAEE0840, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x00000147EAEE6FA0, 16 bytes long.
 Data: <8s&#238;&#234;G           > 38 73 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000147EAEE6B40, 16 bytes long.
 Data: < s&#238;&#234;G           > 10 73 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000147EAEE6F50, 16 bytes long.
 Data: <&#232;r&#238;&#234;G           > E8 72 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000147EAEE62D0, 16 bytes long.
 Data: <&#192;r&#238;&#234;G           > C0 72 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000147EAEE5640, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x00000147EAEE65A0, 16 bytes long.
 Data: < &#181;&#236;&#234;G           > 08 B5 EC EA 47 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000147EAEE0300, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x00000147EAEE6F00, 16 bytes long.
 Data: <&#224;&#180;&#236;&#234;G           > E0 B4 EC EA 47 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000147EAEE6410, 16 bytes long.
 Data: <&#184;&#180;&#236;&#234;G           > B8 B4 EC EA 47 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000147EAEE6AF0, 16 bytes long.
 Data: < &#180;&#236;&#234;G           > 90 B4 EC EA 47 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000147EAEE6A00, 16 bytes long.
 Data: <h&#180;&#236;&#234;G           > 68 B4 EC EA 47 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000147EAEE6B90, 16 bytes long.
 Data: <@&#180;&#236;&#234;G           > 40 B4 EC EA 47 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000147EAEE6690, 16 bytes long.
 Data: < &#180;&#236;&#234;G           > 18 B4 EC EA 47 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000147EAEE0AE0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x00000147EAEE64B0, 16 bytes long.
 Data: <&#240;&#179;&#236;&#234;G           > F0 B3 EC EA 47 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000147EAECB3F0, 320 bytes long.
 Data: <&#176;d&#238;&#234;G   &#224; &#238;&#234;G   > B0 64 EE EA 47 01 00 00 E0 0A EE EA 47 01 00 00 
{274} normal block at 0x00000147EAEE60A0, 16 bytes long.
 Data: <&#160;r&#238;&#234;G           > A0 72 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000147EAEE6EB0, 16 bytes long.
 Data: <xr&#238;&#234;G           > 78 72 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000147EAEE0240, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x00000147EAEE6E60, 16 bytes long.
 Data: <Pr&#238;&#234;G           > 50 72 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000147EAEE0DE0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x00000147EAEE67D0, 16 bytes long.
 Data: < q&#238;&#234;G           > 98 71 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000147EAEE66E0, 16 bytes long.
 Data: <pq&#238;&#234;G           > 70 71 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000147EAEE6140, 16 bytes long.
 Data: <Hq&#238;&#234;G           > 48 71 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000147EAEE69B0, 16 bytes long.
 Data: < q&#238;&#234;G           > 20 71 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000147EAEE6280, 16 bytes long.
 Data: <&#248;p&#238;&#234;G           > F8 70 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000147EAEE6E10, 16 bytes long.
 Data: <&#208;p&#238;&#234;G           > D0 70 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000147EAEE6550, 16 bytes long.
 Data: < W&#238;&#234;G           > 20 57 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000147EAEE5720, 40 bytes long.
 Data: <Pe&#238;&#234;G    a&#187;&#236;G   > 50 65 EE EA 47 01 00 00 90 61 BB EC 47 01 00 00 
{260} normal block at 0x00000147EAEE6BE0, 16 bytes long.
 Data: <&#176;p&#238;&#234;G           > B0 70 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000147EAEE6D20, 16 bytes long.
 Data: < p&#238;&#234;G           > 88 70 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000147EAEE0A20, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x00000147EAEE6910, 16 bytes long.
 Data: <`p&#238;&#234;G           > 60 70 EE EA 47 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000147EAEE7060, 992 bytes long.
 Data: < i&#238;&#234;G     &#238;&#234;G   > 10 69 EE EA 47 01 00 00 20 0A EE EA 47 01 00 00 
{92} normal block at 0x00000147EAEE0720, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x00000147EAEDFB90, 16 bytes long.
 Data: < &#193;&#236;&#234;G           > 10 C1 EC EA 47 01 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x00000147EAECC110, 40 bytes long.
 Data: < &#251;&#237;&#234;G     &#238;&#234;G   > 90 FB ED EA 47 01 00 00 20 07 EE EA 47 01 00 00 
{69} normal block at 0x00000147EAEDF6E0, 16 bytes long.
 Data: < &#234;&#223;&#200;&#246;           > 80 EA DF C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000147EAEDFD70, 16 bytes long.
 Data: <@&#233;&#223;&#200;&#246;           > 40 E9 DF C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000147EAEDFB40, 16 bytes long.
 Data: <&#248;W&#220;&#200;&#246;           > F8 57 DC C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000147EAEDF7D0, 16 bytes long.
 Data: <&#216;W&#220;&#200;&#246;           > D8 57 DC C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000147EAEDFF50, 16 bytes long.
 Data: <P &#220;&#200;&#246;           > 50 04 DC C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000147EAEDF0A0, 16 bytes long.
 Data: <0 &#220;&#200;&#246;           > 30 04 DC C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000147EAEDFEB0, 16 bytes long.
 Data: <&#224; &#220;&#200;&#246;           > E0 02 DC C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000147EAEDF460, 16 bytes long.
 Data: <  &#220;&#200;&#246;           > 10 04 DC C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000147EAEDFAF0, 16 bytes long.
 Data: <p &#220;&#200;&#246;           > 70 04 DC C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000147EAEDF190, 16 bytes long.
 Data: < &#192;&#218;&#200;&#246;           > 18 C0 DA C8 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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