Task 38660974

Name test_394-GPUGRID_TEST_ATM_40STEP_20261023-4-40-RND8154_0
Workunit 31604430
Created 24 Oct 2026, 15:01:20 UTC
Sent 24 Oct 2026, 15:10:26 UTC
Report deadline 29 Oct 2026, 15:10:26 UTC
Received 24 Oct 2026, 20:38:46 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654491
Run time 1 hours 33 min 42 sec
CPU time 1 hours 25 min 18 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 21,377.06 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 729.21 MB
Peak swap size 6.94 GB
Peak disk usage 4.05 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
00:34:47 (26864): wrapper (7.9.26016): starting
00:34:47 (26864): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
00:34:54 (26864): Library/usr/bin/tar.exe exited; CPU time 0.109375
00:34:54 (26864): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
02:04:34 (26864): C:/Windows/system32/cmd.exe exited; CPU time 5118.390625
02:04:34 (26864): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 117739897 bytes.
Dumping objects ->
{3835610} normal block at 0x000001D8AC96D7A0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835599} normal block at 0x000001D8AC96D9D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835588} normal block at 0x000001D8AC96E140, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835577} normal block at 0x000001D8AC96D5E0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835566} normal block at 0x000001D8AA8E5710, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835535} normal block at 0x000001D8AC9BB100, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835522} normal block at 0x000001D8AA8DE620, 8 bytes long.
 Data: <        > 00 00 E0 AA D8 01 00 00 
{3834083} normal block at 0x000001D8AA8DDC20, 8 bytes long.
 Data: <@       > 40 DF 8C AA D8 01 00 00 
..\zip\boinc_zip.cpp(122) : {318} normal block at 0x000001D8AA8E16A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{303} normal block at 0x000001D8AA8CF7C0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{302} normal block at 0x000001D8AA8E6260, 16 bytes long.
 Data: < t              > A8 74 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x000001D8AA8E6BC0, 16 bytes long.
 Data: < t              > 80 74 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001D8AA8E0830, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{299} normal block at 0x000001D8AA8E7020, 16 bytes long.
 Data: <Xt              > 58 74 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001D8AA8E6940, 16 bytes long.
 Data: <0t              > 30 74 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001D8AA8E6C60, 16 bytes long.
 Data: < t              > 08 74 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001D8AA8E68F0, 16 bytes long.
 Data: < s              > E0 73 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001D8AA8E5470, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{294} normal block at 0x000001D8AA8E6210, 16 bytes long.
 Data: <                > C8 F9 8D AA D8 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001D8AA8E0950, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{292} normal block at 0x000001D8AA8E6350, 16 bytes long.
 Data: <                > A0 F9 8D AA D8 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001D8AA8E6B70, 16 bytes long.
 Data: <x               > 78 F9 8D AA D8 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001D8AA8E6FD0, 16 bytes long.
 Data: <P               > 50 F9 8D AA D8 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001D8AA8E6B20, 16 bytes long.
 Data: <(               > 28 F9 8D AA D8 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001D8AA8E68A0, 16 bytes long.
 Data: <                > 00 F9 8D AA D8 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001D8AA8E6C10, 16 bytes long.
 Data: <                > D8 F8 8D AA D8 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001D8AA8E06B0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{284} normal block at 0x000001D8AA8E62B0, 16 bytes long.
 Data: <                > B0 F8 8D AA D8 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001D8AA8DF8B0, 320 bytes long.
 Data: < b              > B0 62 8E AA D8 01 00 00 B0 06 8E AA D8 01 00 00 
{282} normal block at 0x000001D8AA8E6F80, 16 bytes long.
 Data: < s              > C0 73 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001D8AA8E65D0, 16 bytes long.
 Data: < s              > 98 73 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001D8AA8E0410, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{279} normal block at 0x000001D8AA8E6D00, 16 bytes long.
 Data: <ps              > 70 73 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001D8AA8E0350, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{277} normal block at 0x000001D8AA8E6AD0, 16 bytes long.
 Data: < r              > B8 72 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001D8AA8E61C0, 16 bytes long.
 Data: < r              > 90 72 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001D8AA8E6CB0, 16 bytes long.
 Data: <hr              > 68 72 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001D8AA8E6850, 16 bytes long.
 Data: <@r              > 40 72 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001D8AA8E66C0, 16 bytes long.
 Data: < r              > 18 72 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001D8AA8E63F0, 16 bytes long.
 Data: < q              > F0 71 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001D8AA8E6E40, 16 bytes long.
 Data: < Z              > 20 5A 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001D8AA8E5A20, 40 bytes long.
 Data: <@n              > 40 6E 8E AA D8 01 00 00 00 B1 9B AC D8 01 00 00 
{268} normal block at 0x000001D8AA8E6A30, 16 bytes long.
 Data: < q              > D0 71 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001D8AA8E6F30, 16 bytes long.
 Data: < q              > A8 71 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001D8AA8E05F0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{265} normal block at 0x000001D8AA8E7110, 16 bytes long.
 Data: < q              > 80 71 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001D8AA8E7180, 992 bytes long.
 Data: < q              > 10 71 8E AA D8 01 00 00 F0 05 8E AA D8 01 00 00 
{100} normal block at 0x000001D8AA8E0B30, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{99} normal block at 0x000001D8AA8DE3F0, 16 bytes long.
 Data: < Z              > 90 5A 8E AA D8 01 00 00 00 00 00 00 00 00 00 00 
{98} normal block at 0x000001D8AA8E5A90, 40 bytes long.
 Data: <        0       > F0 E3 8D AA D8 01 00 00 30 0B 8E AA D8 01 00 00 
{75} normal block at 0x000001D8AA8DDEA0, 16 bytes long.
 Data: <   p            > 80 EA DF 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000001D8AA8DD9F0, 16 bytes long.
 Data: <@  p            > 40 E9 DF 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001D8AA8DDA40, 16 bytes long.
 Data: < W p            > F8 57 DC 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001D8AA8DE2B0, 16 bytes long.
 Data: < W p            > D8 57 DC 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001D8AA8DDB30, 16 bytes long.
 Data: <P  p            > 50 04 DC 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001D8AA8DE7B0, 16 bytes long.
 Data: <0  p            > 30 04 DC 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001D8AA8DE170, 16 bytes long.
 Data: <   p            > E0 02 DC 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001D8AA8DE710, 16 bytes long.
 Data: <   p            > 10 04 DC 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001D8AA8DDCC0, 16 bytes long.
 Data: <p  p            > 70 04 DC 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001D8AA8DDD10, 16 bytes long.
 Data: <   p            > 18 C0 DA 70 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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