Task 38660524

Name test_296-GPUGRID_TEST_ATM_40STEP_20261023-8-40-RND7382_0
Workunit 31604024
Created 24 Oct 2026, 14:17:50 UTC
Sent 24 Oct 2026, 16:17:46 UTC
Report deadline 29 Oct 2026, 16:17:46 UTC
Received 24 Oct 2026, 18:17:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 559888
Run time 24 min 25 sec
CPU time 20 min 58 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 112,285.23 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 760.55 MB
Peak swap size 13.26 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
17:23:06 (40588): wrapper (7.9.26016): starting
17:23:06 (40588): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:23:08 (40588): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:23:08 (40588): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\Boinc\data\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\Boinc\data\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:45:43 (40588): C:/Windows/system32/cmd.exe exited; CPU time 1258.015625
17:45:43 (40588): called boinc_finish(0)
0 bytes in 0 Free Blocks.
346 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 33667718 bytes.
Dumping objects ->
{3835279} normal block at 0x000001C1D2134770, 48 bytes long.
 Data: <PATH=D:\Boinc\da> 50 41 54 48 3D 44 3A 5C 42 6F 69 6E 63 5C 64 61 
{3835268} normal block at 0x000001C1D3FD0830, 32 bytes long.
 Data: <HOME=D:\Boinc\da> 48 4F 4D 45 3D 44 3A 5C 42 6F 69 6E 63 5C 64 61 
{3835257} normal block at 0x000001C1D3FCF4B0, 32 bytes long.
 Data: <TMP=D:\Boinc\dat> 54 4D 50 3D 44 3A 5C 42 6F 69 6E 63 5C 64 61 74 
{3835246} normal block at 0x000001C1D3FCF8D0, 32 bytes long.
 Data: <TEMP=D:\Boinc\da> 54 45 4D 50 3D 44 3A 5C 42 6F 69 6E 63 5C 64 61 
{3835235} normal block at 0x000001C1D3FD0B30, 32 bytes long.
 Data: <TMPDIR=D:\Boinc\> 54 4D 50 44 49 52 3D 44 3A 5C 42 6F 69 6E 63 5C 
{3835204} normal block at 0x000001C1D2134930, 48 bytes long.
 Data: <PATH=D:\Boinc\da> 50 41 54 48 3D 44 3A 5C 42 6F 69 6E 63 5C 64 61 
{3835193} normal block at 0x000001C1D3F9D2A0, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835190} normal block at 0x000001C1D212EEC0, 8 bytes long.
 Data: <  e&#210;&#193;   > 00 00 65 D2 C1 01 00 00 
{3834567} normal block at 0x000001C1D3F9D160, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000001C1D212ED80, 8 bytes long.
 Data: < :&#254;&#211;&#193;   > 00 3A FE D3 C1 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001C1D2130AD0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001C1D2126830, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001C1D21356F0, 16 bytes long.
 Data: <hf &#210;&#193;           > 68 66 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001C1D2135E70, 16 bytes long.
 Data: <@f &#210;&#193;           > 40 66 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001C1D21303E0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001C1D2135600, 16 bytes long.
 Data: < f &#210;&#193;           > 18 66 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001C1D2135470, 16 bytes long.
 Data: <&#240;e &#210;&#193;           > F0 65 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001C1D2135A60, 16 bytes long.
 Data: <&#200;e &#210;&#193;           > C8 65 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001C1D2135A10, 16 bytes long.
 Data: <&#160;e &#210;&#193;           > A0 65 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001C1D2134D20, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001C1D21360A0, 16 bytes long.
 Data: < &#182; &#210;&#193;           > 18 B6 11 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001C1D21306E0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001C1D2136050, 16 bytes long.
 Data: <&#240;&#181; &#210;&#193;           > F0 B5 11 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001C1D2136230, 16 bytes long.
 Data: <&#200;&#181; &#210;&#193;           > C8 B5 11 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001C1D21356A0, 16 bytes long.
 Data: <&#160;&#181; &#210;&#193;           > A0 B5 11 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001C1D21355B0, 16 bytes long.
 Data: <x&#181; &#210;&#193;           > 78 B5 11 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001C1D2136190, 16 bytes long.
 Data: <P&#181; &#210;&#193;           > 50 B5 11 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001C1D21357E0, 16 bytes long.
 Data: <(&#181; &#210;&#193;           > 28 B5 11 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001C1D212F840, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000001C1D2135B50, 16 bytes long.
 Data: < &#181; &#210;&#193;           > 00 B5 11 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001C1D211B500, 320 bytes long.
 Data: <P[ &#210;&#193;   @&#248; &#210;&#193;   > 50 5B 13 D2 C1 01 00 00 40 F8 12 D2 C1 01 00 00 
{276} normal block at 0x000001C1D2136140, 16 bytes long.
 Data: < e &#210;&#193;           > 80 65 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001C1D2135920, 16 bytes long.
 Data: <Xe &#210;&#193;           > 58 65 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001C1D2130260, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001C1D2135BA0, 16 bytes long.
 Data: <0e &#210;&#193;           > 30 65 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001C1D212FF60, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001C1D2135DD0, 16 bytes long.
 Data: <xd &#210;&#193;           > 78 64 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001C1D21359C0, 16 bytes long.
 Data: <Pd &#210;&#193;           > 50 64 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001C1D2135880, 16 bytes long.
 Data: <(d &#210;&#193;           > 28 64 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001C1D2135C90, 16 bytes long.
 Data: < d &#210;&#193;           > 00 64 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001C1D21361E0, 16 bytes long.
 Data: <&#216;c &#210;&#193;           > D8 63 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001C1D2135970, 16 bytes long.
 Data: <&#176;c &#210;&#193;           > B0 63 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001C1D21358D0, 16 bytes long.
 Data: <&#160;I &#210;&#193;           > A0 49 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001C1D21349A0, 40 bytes long.
 Data: <&#208;X &#210;&#193;   0I &#210;&#193;   > D0 58 13 D2 C1 01 00 00 30 49 13 D2 C1 01 00 00 
{262} normal block at 0x000001C1D2135830, 16 bytes long.
 Data: < c &#210;&#193;           > 90 63 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001C1D2135BF0, 16 bytes long.
 Data: <hc &#210;&#193;           > 68 63 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001C1D212FAE0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001C1D2136000, 16 bytes long.
 Data: <@c &#210;&#193;           > 40 63 13 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001C1D2136340, 992 bytes long.
 Data: < ` &#210;&#193;   &#224;&#250; &#210;&#193;   > 00 60 13 D2 C1 01 00 00 E0 FA 12 D2 C1 01 00 00 
{94} normal block at 0x000001C1D2130680, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001C1D212EC40, 16 bytes long.
 Data: <&#192;&#239; &#210;&#193;           > C0 EF 11 D2 C1 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001C1D211EFC0, 40 bytes long.
 Data: <@&#236; &#210;&#193;      &#210;&#193;   > 40 EC 12 D2 C1 01 00 00 80 06 13 D2 C1 01 00 00 
{71} normal block at 0x000001C1D212ED30, 16 bytes long.
 Data: < &#234;N.&#246;           > 80 EA 4E 2E F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001C1D212F5F0, 16 bytes long.
 Data: <@&#233;N.&#246;           > 40 E9 4E 2E F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001C1D212EF10, 16 bytes long.
 Data: <&#248;WK.&#246;           > F8 57 4B 2E F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001C1D212EA10, 16 bytes long.
 Data: <&#216;WK.&#246;           > D8 57 4B 2E F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001C1D212EBF0, 16 bytes long.
 Data: <P K.&#246;           > 50 04 4B 2E F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001C1D212EA60, 16 bytes long.
 Data: <0 K.&#246;           > 30 04 4B 2E F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001C1D212ECE0, 16 bytes long.
 Data: <&#224; K.&#246;           > E0 02 4B 2E F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001C1D212F000, 16 bytes long.
 Data: <  K.&#246;           > 10 04 4B 2E F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001C1D212E8D0, 16 bytes long.
 Data: <p K.&#246;           > 70 04 4B 2E F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001C1D212EAB0, 16 bytes long.
 Data: < &#192;I.&#246;           > 18 C0 49 2E F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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