Task 38655755

Name test_966-GPUGRID_TEST_ATM_40STEP_20261023-4-40-RND8701_0
Workunit 31599507
Created 24 Oct 2026, 9:55:58 UTC
Sent 24 Oct 2026, 9:56:07 UTC
Report deadline 29 Oct 2026, 9:56:07 UTC
Received 24 Oct 2026, 11:52:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654681
Run time 29 min 16 sec
CPU time 27 min 56 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 14,564.90 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 723.53 MB
Peak swap size 6.87 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
08:24:00 (31008): wrapper (7.9.26016): starting
08:24:00 (31008): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
08:24:01 (31008): Library/usr/bin/tar.exe exited; CPU time 0.015625
08:24:01 (31008): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\APPs\BOINC\Data\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\APPs\BOINC\Data\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
08:52:35 (31008): C:/Windows/system32/cmd.exe exited; CPU time 1676.140625
08:52:35 (31008): called boinc_finish(0)
0 bytes in 0 Free Blocks.
192 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 33081155 bytes.
Dumping objects ->
{3835626} normal block at 0x00000229F263B730, 48 bytes long.
 Data: <PATH=D:\APPs\BOI> 50 41 54 48 3D 44 3A 5C 41 50 50 73 5C 42 4F 49 
{3835615} normal block at 0x00000229F4617840, 32 bytes long.
 Data: <HOME=D:\APPs\BOI> 48 4F 4D 45 3D 44 3A 5C 41 50 50 73 5C 42 4F 49 
{3835604} normal block at 0x00000229F4617060, 32 bytes long.
 Data: <TMP=D:\APPs\BOIN> 54 4D 50 3D 44 3A 5C 41 50 50 73 5C 42 4F 49 4E 
{3835593} normal block at 0x00000229F46168E0, 32 bytes long.
 Data: <TEMP=D:\APPs\BOI> 54 45 4D 50 3D 44 3A 5C 41 50 50 73 5C 42 4F 49 
{3835582} normal block at 0x00000229F26155E0, 48 bytes long.
 Data: <TMPDIR=D:\APPs\B> 54 4D 50 44 49 52 3D 44 3A 5C 41 50 50 73 5C 42 
{3835551} normal block at 0x00000229F2615B20, 48 bytes long.
 Data: <PATH=D:\APPs\BOI> 50 41 54 48 3D 44 3A 5C 41 50 50 73 5C 42 4F 49 
..\api\boinc_api.cpp(309) : {3835538} normal block at 0x00000229F260E130, 8 bytes long.
 Data: <  ^ )   > 00 00 5E F2 29 02 00 00 
{3834065} normal block at 0x00000229F260E900, 8 bytes long.
 Data: < Zb )   > 20 5A 62 F4 29 02 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x00000229F2612090, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x00000229F2607470, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x00000229F2616CA0, 16 bytes long.
 Data: <8ua )           > 38 75 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000229F2616480, 16 bytes long.
 Data: < ua )           > 10 75 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000229F2610060, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x00000229F2617150, 16 bytes long.
 Data: < ta )           > E8 74 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000229F2616ED0, 16 bytes long.
 Data: < ta )           > C0 74 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000229F2616C00, 16 bytes long.
 Data: < ta )           > 98 74 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000229F2616750, 16 bytes long.
 Data: <pta )           > 70 74 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000229F26159D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x00000229F2616340, 16 bytes long.
 Data: <  _ )           > A8 BC 5F F2 29 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000229F26108A0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x00000229F26162F0, 16 bytes long.
 Data: <  _ )           > 80 BC 5F F2 29 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000229F2616610, 16 bytes long.
 Data: <X _ )           > 58 BC 5F F2 29 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000229F26168E0, 16 bytes long.
 Data: <0 _ )           > 30 BC 5F F2 29 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000229F2617100, 16 bytes long.
 Data: <  _ )           > 08 BC 5F F2 29 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000229F2616700, 16 bytes long.
 Data: <  _ )           > E0 BB 5F F2 29 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000229F2616390, 16 bytes long.
 Data: <  _ )           > B8 BB 5F F2 29 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000229F260FC40, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x00000229F2616D40, 16 bytes long.
 Data: <  _ )           > 90 BB 5F F2 29 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000229F25FBB90, 320 bytes long.
 Data: <@ma )   @ ` )   > 40 6D 61 F2 29 02 00 00 40 FC 60 F2 29 02 00 00 
{278} normal block at 0x00000229F26166B0, 16 bytes long.
 Data: <Pta )           > 50 74 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000229F2616A20, 16 bytes long.
 Data: <(ta )           > 28 74 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000229F2610660, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x00000229F26167F0, 16 bytes long.
 Data: < ta )           > 00 74 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000229F2610240, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x00000229F26163E0, 16 bytes long.
 Data: <Hsa )           > 48 73 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000229F26162A0, 16 bytes long.
 Data: < sa )           > 20 73 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000229F2616CF0, 16 bytes long.
 Data: < ra )           > F8 72 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000229F26165C0, 16 bytes long.
 Data: < ra )           > D0 72 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000229F2616660, 16 bytes long.
 Data: < ra )           > A8 72 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000229F2616250, 16 bytes long.
 Data: < ra )           > 80 72 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000229F2616980, 16 bytes long.
 Data: < Va )           > C0 56 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000229F26156C0, 40 bytes long.
 Data: < ia )    [a )   > 80 69 61 F2 29 02 00 00 20 5B 61 F2 29 02 00 00 
{264} normal block at 0x00000229F2616430, 16 bytes long.
 Data: <`ra )           > 60 72 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000229F2616BB0, 16 bytes long.
 Data: <8ra )           > 38 72 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000229F2610840, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x00000229F2616B10, 16 bytes long.
 Data: < ra )           > 10 72 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000229F2617210, 992 bytes long.
 Data: < ka )   @ a )   > 10 6B 61 F2 29 02 00 00 40 08 61 F2 29 02 00 00 
{96} normal block at 0x00000229F260FF40, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x00000229F260DBE0, 16 bytes long.
 Data: < Ta )           > 90 54 61 F2 29 02 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x00000229F2615490, 40 bytes long.
 Data: <  ` )   @ ` )   > E0 DB 60 F2 29 02 00 00 40 FF 60 F2 29 02 00 00 
{71} normal block at 0x00000229F260E8B0, 16 bytes long.
 Data: <  0             > 80 EA 30 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000229F260E220, 16 bytes long.
 Data: <@ 0             > 40 E9 30 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000229F260E540, 16 bytes long.
 Data: < W-             > F8 57 2D 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000229F260E680, 16 bytes long.
 Data: < W-             > D8 57 2D 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000229F260E630, 16 bytes long.
 Data: <P -             > 50 04 2D 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000229F260DFF0, 16 bytes long.
 Data: <0 -             > 30 04 2D 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000229F260DEB0, 16 bytes long.
 Data: <  -             > E0 02 2D 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000229F260DA50, 16 bytes long.
 Data: <  -             > 10 04 2D 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000229F260E0E0, 16 bytes long.
 Data: <p -             > 70 04 2D 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000229F260DAA0, 16 bytes long.
 Data: <  +             > 18 C0 2B 20 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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