Task 38653174

Name test_588-GPUGRID_TEST_ATM_40STEP_20261023-2-40-RND9358_0
Workunit 31597180
Created 24 Oct 2026, 5:10:20 UTC
Sent 24 Oct 2026, 5:18:32 UTC
Report deadline 29 Oct 2026, 5:18:32 UTC
Received 24 Oct 2026, 6:32:15 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 593343
Run time 1 hours 0 min 28 sec
CPU time 57 min 24 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 2,906.63 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 711.21 MB
Peak swap size 5.23 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
14:32:10 (65004): wrapper (7.9.26016): starting
14:32:10 (65004): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
14:32:11 (65004): Library/usr/bin/tar.exe exited; CPU time 0.000000
14:32:11 (65004): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'E:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'E:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
15:30:34 (65004): C:/Windows/system32/cmd.exe exited; CPU time 3444.484375
15:30:34 (65004): called boinc_finish(0)
0 bytes in 0 Free Blocks.
526 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 75066087 bytes.
Dumping objects ->
{3835621} normal block at 0x000001A4AB030AE0, 48 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835610} normal block at 0x000001A4AB030FB0, 48 bytes long.
 Data: <HOME=E:\ProgramD> 48 4F 4D 45 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835599} normal block at 0x000001A4AB0307D0, 48 bytes long.
 Data: <TMP=E:\ProgramDa> 54 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835588} normal block at 0x000001A4AB031480, 48 bytes long.
 Data: <TEMP=E:\ProgramD> 54 45 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835577} normal block at 0x000001A4AB0316B0, 48 bytes long.
 Data: <TMPDIR=E:\Progra> 54 4D 50 44 49 52 3D 45 3A 5C 50 72 6F 67 72 61 
{3835546} normal block at 0x000001A4AB5BAE60, 64 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835535} normal block at 0x000001A4AB5F3370, 135 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835532} normal block at 0x000001A4A94ECAD0, 8 bytes long.
 Data: <  G&#169;&#164;   > 00 00 47 A9 A4 01 00 00 
{3834786} normal block at 0x000001A4AB5F3D30, 135 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3834053} normal block at 0x000001A4A94EC850, 8 bytes long.
 Data: <&#208;J_&#171;&#164;   > D0 4A 5F AB A4 01 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001A4A94F3740, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001A4A94E9970, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x000001A4A94FEC40, 16 bytes long.
 Data: <&#168; O&#169;&#164;           > A8 F2 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001A4A94FE7E0, 16 bytes long.
 Data: <  O&#169;&#164;           > 80 F2 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001A4A94F8980, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x000001A4A94FE1A0, 16 bytes long.
 Data: <X O&#169;&#164;           > 58 F2 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001A4A94FE330, 16 bytes long.
 Data: <0 O&#169;&#164;           > 30 F2 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001A4A94FE510, 16 bytes long.
 Data: <  O&#169;&#164;           > 08 F2 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001A4A94FEA10, 16 bytes long.
 Data: <  O&#169;&#164;           > E0 F1 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001A4A94FA620, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x000001A4A94FE060, 16 bytes long.
 Data: <H&#179;N&#169;&#164;           > 48 B3 4E A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001A4A94F8B00, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x000001A4A94FEAB0, 16 bytes long.
 Data: < &#179;N&#169;&#164;           > 20 B3 4E A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001A4A94FE6F0, 16 bytes long.
 Data: < &#178;N&#169;&#164;           > F8 B2 4E A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001A4A94FE010, 16 bytes long.
 Data: <&#208;&#178;N&#169;&#164;           > D0 B2 4E A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001A4A94FE9C0, 16 bytes long.
 Data: <&#168;&#178;N&#169;&#164;           > A8 B2 4E A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001A4A94FE420, 16 bytes long.
 Data: < &#178;N&#169;&#164;           > 80 B2 4E A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001A4A94FE970, 16 bytes long.
 Data: <X&#178;N&#169;&#164;           > 58 B2 4E A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001A4A94F92E0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x000001A4A94FE240, 16 bytes long.
 Data: <0&#178;N&#169;&#164;           > 30 B2 4E A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001A4A94EB230, 320 bytes long.
 Data: <@ O&#169;&#164;     O&#169;&#164;   > 40 E2 4F A9 A4 01 00 00 E0 92 4F A9 A4 01 00 00 
{275} normal block at 0x000001A4A94FDFC0, 16 bytes long.
 Data: <&#192; O&#169;&#164;           > C0 F1 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001A4A94FE150, 16 bytes long.
 Data: <  O&#169;&#164;           > 98 F1 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001A4A94F8D40, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x000001A4A94FE600, 16 bytes long.
 Data: <p O&#169;&#164;           > 70 F1 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001A4A94F8C80, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x000001A4A94FEC90, 16 bytes long.
 Data: <&#184; O&#169;&#164;           > B8 F0 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001A4A94FE5B0, 16 bytes long.
 Data: <  O&#169;&#164;           > 90 F0 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001A4A94FEBF0, 16 bytes long.
 Data: <h O&#169;&#164;           > 68 F0 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001A4A94FE920, 16 bytes long.
 Data: <@ O&#169;&#164;           > 40 F0 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001A4A94FEEC0, 16 bytes long.
 Data: <  O&#169;&#164;           > 18 F0 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001A4A94FE380, 16 bytes long.
 Data: <  O&#169;&#164;           > F0 EF 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001A4A94FEE20, 16 bytes long.
 Data: <&#208;&#164;O&#169;&#164;           > D0 A4 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001A4A94FA4D0, 40 bytes long.
 Data: <  O&#169;&#164;   `&#174;[&#171;&#164;   > 20 EE 4F A9 A4 01 00 00 60 AE 5B AB A4 01 00 00 
{261} normal block at 0x000001A4A94FEBA0, 16 bytes long.
 Data: <&#208; O&#169;&#164;           > D0 EF 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001A4A94FEF10, 16 bytes long.
 Data: <&#168; O&#169;&#164;           > A8 EF 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001A4A94F9640, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x000001A4A94FE4C0, 16 bytes long.
 Data: <  O&#169;&#164;           > 80 EF 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001A4A94FEF80, 992 bytes long.
 Data: <&#192; O&#169;&#164;   @ O&#169;&#164;   > C0 E4 4F A9 A4 01 00 00 40 96 4F A9 A4 01 00 00 
{93} normal block at 0x000001A4A94F8E60, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x000001A4A94EC5D0, 16 bytes long.
 Data: <  O&#169;&#164;           > E0 A0 4F A9 A4 01 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x000001A4A94FA0E0, 40 bytes long.
 Data: <&#208;&#197;N&#169;&#164;   ` O&#169;&#164;   > D0 C5 4E A9 A4 01 00 00 60 8E 4F A9 A4 01 00 00 
{68} normal block at 0x000001A4A94ECD50, 16 bytes long.
 Data: <  &#201;*            > 80 EA C9 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001A4A94ECFD0, 16 bytes long.
 Data: <@ &#201;*            > 40 E9 C9 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001A4A94EC4E0, 16 bytes long.
 Data: < W&#198;*            > F8 57 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001A4A94EC800, 16 bytes long.
 Data: <&#216;W&#198;*            > D8 57 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001A4A94EC710, 16 bytes long.
 Data: <P &#198;*            > 50 04 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001A4A94ECD00, 16 bytes long.
 Data: <0 &#198;*            > 30 04 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001A4A94ECA30, 16 bytes long.
 Data: <  &#198;*            > E0 02 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001A4A94ECA80, 16 bytes long.
 Data: <  &#198;*            > 10 04 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001A4A94ECF30, 16 bytes long.
 Data: <p &#198;*            > 70 04 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001A4A94EC9E0, 16 bytes long.
 Data: < &#192;&#196;*            > 18 C0 C4 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra