Task 38652980

Name test_338-GPUGRID_TEST_ATM_40STEP_20261023-3-40-RND4968_0
Workunit 31597028
Created 24 Oct 2026, 4:50:43 UTC
Sent 24 Oct 2026, 6:11:48 UTC
Report deadline 29 Oct 2026, 6:11:48 UTC
Received 24 Oct 2026, 7:22:50 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 642350
Run time 31 min 29 sec
CPU time 29 min 29 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 16,408.10 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 722.00 MB
Peak swap size 9.87 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
01:52:07 (375592): wrapper (7.9.26016): starting
01:52:07 (375592): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
01:52:08 (375592): Library/usr/bin/tar.exe exited; CPU time 0.046875
01:52:08 (375592): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
02:22:21 (375592): C:/Windows/system32/cmd.exe exited; CPU time 1769.140625
02:22:21 (375592): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 39992687 bytes.
Dumping objects ->
{3835248} normal block at 0x000002611E7FC290, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835237} normal block at 0x000002611E7FC8B0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835226} normal block at 0x000002611E7FCD80, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835215} normal block at 0x000002611E7FC5A0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835204} normal block at 0x000002611E7FC6F0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835173} normal block at 0x000002611E7FC180, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835160} normal block at 0x000002611C96C9C0, 8 bytes long.
 Data: <  &#145; a   > 00 00 91 1C 61 02 00 00 
{3833959} normal block at 0x000002611C96C920, 8 bytes long.
 Data: <&#240;G  a   > F0 47 99 1C 61 02 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000002611C94AC20, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002611C94C9F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x000002611C96C6F0, 16 bytes long.
 Data: <hf&#150; a           > 68 66 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002611C96C6A0, 16 bytes long.
 Data: <@f&#150; a           > 40 66 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002611C96E030, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x000002611C96C650, 16 bytes long.
 Data: < f&#150; a           > 18 66 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002611C96C880, 16 bytes long.
 Data: <&#240;e&#150; a           > F0 65 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002611C96C600, 16 bytes long.
 Data: <&#200;e&#150; a           > C8 65 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002611C96C510, 16 bytes long.
 Data: <&#160;e&#150; a           > A0 65 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002611C968240, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x000002611C96C7E0, 16 bytes long.
 Data: <&#200;&#137;&#150; a           > C8 89 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002611C96E7B0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x000002611C96C3D0, 16 bytes long.
 Data: <&#160;&#137;&#150; a           > A0 89 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002611C96C380, 16 bytes long.
 Data: <x&#137;&#150; a           > 78 89 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002611C96C2E0, 16 bytes long.
 Data: <P&#137;&#150; a           > 50 89 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002611C96C1F0, 16 bytes long.
 Data: <(&#137;&#150; a           > 28 89 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002611C96BFC0, 16 bytes long.
 Data: < &#137;&#150; a           > 00 89 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002611C96BF20, 16 bytes long.
 Data: <&#216; &#150; a           > D8 88 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002611C96E390, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x000002611C96C420, 16 bytes long.
 Data: <&#176; &#150; a           > B0 88 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002611C9688B0, 320 bytes long.
 Data: < &#196;&#150; a    &#227;&#150; a   > 20 C4 96 1C 61 02 00 00 90 E3 96 1C 61 02 00 00 
{275} normal block at 0x000002611C96C470, 16 bytes long.
 Data: < e&#150; a           > 80 65 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002611C96CA60, 16 bytes long.
 Data: <Xe&#150; a           > 58 65 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002611C96E150, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x000002611C96CB00, 16 bytes long.
 Data: <0e&#150; a           > 30 65 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002611C96EA50, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x000002611C96C1A0, 16 bytes long.
 Data: <xd&#150; a           > 78 64 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002611C96C0B0, 16 bytes long.
 Data: <Pd&#150; a           > 50 64 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002611C96BDE0, 16 bytes long.
 Data: <(d&#150; a           > 28 64 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002611C96C100, 16 bytes long.
 Data: < d&#150; a           > 00 64 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002611C96C8D0, 16 bytes long.
 Data: <&#216;c&#150; a           > D8 63 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002611C96C830, 16 bytes long.
 Data: <&#176;c&#150; a           > B0 63 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002611C96BF70, 16 bytes long.
 Data: < &#132;&#150; a           > 00 84 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002611C968400, 40 bytes long.
 Data: <p&#191;&#150; a    &#193;  a   > 70 BF 96 1C 61 02 00 00 80 C1 7F 1E 61 02 00 00 
{261} normal block at 0x000002611C96BD40, 16 bytes long.
 Data: < c&#150; a           > 90 63 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002611C96BD90, 16 bytes long.
 Data: <hc&#150; a           > 68 63 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002611C952F60, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x000002611C96BE30, 16 bytes long.
 Data: <@c&#150; a           > 40 63 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000002611C966340, 992 bytes long.
 Data: <0&#190;&#150; a   `/&#149; a   > 30 BE 96 1C 61 02 00 00 60 2F 95 1C 61 02 00 00 
{93} normal block at 0x000002611C952F00, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x000002611C959440, 16 bytes long.
 Data: < &#135;&#150; a           > 10 87 96 1C 61 02 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x000002611C968710, 40 bytes long.
 Data: <@&#148;&#149; a    /&#149; a   > 40 94 95 1C 61 02 00 00 00 2F 95 1C 61 02 00 00 
{70} normal block at 0x000002611C958F40, 16 bytes long.
 Data: < &#234;&#255;&#154;&#246;           > 80 EA FF 9A F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002611C9593F0, 16 bytes long.
 Data: <@&#233;&#255;&#154;&#246;           > 40 E9 FF 9A F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002611C958EF0, 16 bytes long.
 Data: <&#248;W&#252;&#154;&#246;           > F8 57 FC 9A F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002611C959350, 16 bytes long.
 Data: <&#216;W&#252;&#154;&#246;           > D8 57 FC 9A F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002611C959C10, 16 bytes long.
 Data: <P &#252;&#154;&#246;           > 50 04 FC 9A F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002611C9597B0, 16 bytes long.
 Data: <0 &#252;&#154;&#246;           > 30 04 FC 9A F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002611C959B70, 16 bytes long.
 Data: <&#224; &#252;&#154;&#246;           > E0 02 FC 9A F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002611C958E50, 16 bytes long.
 Data: <  &#252;&#154;&#246;           > 10 04 FC 9A F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002611C959A80, 16 bytes long.
 Data: <p &#252;&#154;&#246;           > 70 04 FC 9A F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002611C9593A0, 16 bytes long.
 Data: < &#192;&#250;&#154;&#246;           > 18 C0 FA 9A F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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