Task 38652137

Name test_531-GPUGRID_TEST_ATM_40STEP_20261023-1-40-RND2848_0
Workunit 31596372
Created 24 Oct 2026, 3:17:57 UTC
Sent 24 Oct 2026, 3:22:58 UTC
Report deadline 29 Oct 2026, 3:22:58 UTC
Received 24 Oct 2026, 4:31:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 593343
Run time 1 hours 0 min 22 sec
CPU time 57 min 12 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 2,906.63 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 712.71 MB
Peak swap size 5.24 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
12:31:30 (49668): wrapper (7.9.26016): starting
12:31:30 (49668): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
12:31:31 (49668): Library/usr/bin/tar.exe exited; CPU time 0.015625
12:31:31 (49668): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'E:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'E:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
13:29:37 (49668): C:/Windows/system32/cmd.exe exited; CPU time 3432.062500
13:29:37 (49668): called boinc_finish(0)
0 bytes in 0 Free Blocks.
526 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 73971447 bytes.
Dumping objects ->
{3835621} normal block at 0x000001A6EDAB1560, 48 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835610} normal block at 0x000001A6EDAB0A70, 48 bytes long.
 Data: <HOME=E:\ProgramD> 48 4F 4D 45 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835599} normal block at 0x000001A6EDAB08B0, 48 bytes long.
 Data: <TMP=E:\ProgramDa> 54 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835588} normal block at 0x000001A6EDAB1020, 48 bytes long.
 Data: <TEMP=E:\ProgramD> 54 45 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835577} normal block at 0x000001A6EDAB1480, 48 bytes long.
 Data: <TMPDIR=E:\Progra> 54 4D 50 44 49 52 3D 45 3A 5C 50 72 6F 67 72 61 
{3835546} normal block at 0x000001A6EDBFB060, 64 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835535} normal block at 0x000001A6EDC33FA0, 135 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835532} normal block at 0x000001A6EBBCC9E0, 8 bytes long.
 Data: <    &#166;   > 00 00 FD EB A6 01 00 00 
{3834786} normal block at 0x000001A6EDC33E00, 135 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3834053} normal block at 0x000001A6EBBCC990, 8 bytes long.
 Data: <&#208;J&#195; &#166;   > D0 4A C3 ED A6 01 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000001A6EBBD39C0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001A6EBBC9E80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x000001A6EBBDE600, 16 bytes long.
 Data: <&#168; &#189; &#166;           > A8 F2 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001A6EBBDE470, 16 bytes long.
 Data: <  &#189; &#166;           > 80 F2 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001A6EBBD8C80, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x000001A6EBBDE100, 16 bytes long.
 Data: <X &#189; &#166;           > 58 F2 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001A6EBBDE5B0, 16 bytes long.
 Data: <0 &#189; &#166;           > 30 F2 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001A6EBBDE740, 16 bytes long.
 Data: <  &#189; &#166;           > 08 F2 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001A6EBBDE420, 16 bytes long.
 Data: <  &#189; &#166;           > E0 F1 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001A6EBBDA3F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x000001A6EBBDE0B0, 16 bytes long.
 Data: <H&#179;&#188; &#166;           > 48 B3 BC EB A6 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001A6EBBD8F80, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x000001A6EBBDEF10, 16 bytes long.
 Data: < &#179;&#188; &#166;           > 20 B3 BC EB A6 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001A6EBBDE060, 16 bytes long.
 Data: < &#178;&#188; &#166;           > F8 B2 BC EB A6 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001A6EBBDEC40, 16 bytes long.
 Data: <&#208;&#178;&#188; &#166;           > D0 B2 BC EB A6 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001A6EBBDE510, 16 bytes long.
 Data: <&#168;&#178;&#188; &#166;           > A8 B2 BC EB A6 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001A6EBBDEEC0, 16 bytes long.
 Data: < &#178;&#188; &#166;           > 80 B2 BC EB A6 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001A6EBBDE1A0, 16 bytes long.
 Data: <X&#178;&#188; &#166;           > 58 B2 BC EB A6 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001A6EBBD8C20, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x000001A6EBBDE9C0, 16 bytes long.
 Data: <0&#178;&#188; &#166;           > 30 B2 BC EB A6 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001A6EBBCB230, 320 bytes long.
 Data: <&#192; &#189; &#166;     &#189; &#166;   > C0 E9 BD EB A6 01 00 00 20 8C BD EB A6 01 00 00 
{275} normal block at 0x000001A6EBBDE6F0, 16 bytes long.
 Data: <&#192; &#189; &#166;           > C0 F1 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001A6EBBDE2E0, 16 bytes long.
 Data: <  &#189; &#166;           > 98 F1 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001A6EBBD94C0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x000001A6EBBDE330, 16 bytes long.
 Data: <p &#189; &#166;           > 70 F1 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001A6EBBD8CE0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x000001A6EBBDEE70, 16 bytes long.
 Data: <&#184; &#189; &#166;           > B8 F0 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001A6EBBDE240, 16 bytes long.
 Data: <  &#189; &#166;           > 90 F0 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001A6EBBDEE20, 16 bytes long.
 Data: <h &#189; &#166;           > 68 F0 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001A6EBBDECE0, 16 bytes long.
 Data: <@ &#189; &#166;           > 40 F0 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001A6EBBDED30, 16 bytes long.
 Data: <  &#189; &#166;           > 18 F0 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001A6EBBDE010, 16 bytes long.
 Data: <  &#189; &#166;           > F0 EF BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001A6EBBDEBF0, 16 bytes long.
 Data: < &#163;&#189; &#166;           > 80 A3 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001A6EBBDA380, 40 bytes long.
 Data: <  &#189; &#166;   `&#176;&#191; &#166;   > F0 EB BD EB A6 01 00 00 60 B0 BF ED A6 01 00 00 
{261} normal block at 0x000001A6EBBDE970, 16 bytes long.
 Data: <&#208; &#189; &#166;           > D0 EF BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001A6EBBDE4C0, 16 bytes long.
 Data: <&#168; &#189; &#166;           > A8 EF BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001A6EBBD8BC0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x000001A6EBBDE290, 16 bytes long.
 Data: <  &#189; &#166;           > 80 EF BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001A6EBBDEF80, 992 bytes long.
 Data: <  &#189; &#166;   &#192; &#189; &#166;   > 90 E2 BD EB A6 01 00 00 C0 8B BD EB A6 01 00 00 
{93} normal block at 0x000001A6EBBD93A0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x000001A6EBBCCBC0, 16 bytes long.
 Data: <p&#167;&#189; &#166;           > 70 A7 BD EB A6 01 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x000001A6EBBDA770, 40 bytes long.
 Data: <&#192;&#203;&#188; &#166;     &#189; &#166;   > C0 CB BC EB A6 01 00 00 A0 93 BD EB A6 01 00 00 
{68} normal block at 0x000001A6EBBCC940, 16 bytes long.
 Data: <  &#201;*            > 80 EA C9 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001A6EBBCC8F0, 16 bytes long.
 Data: <@ &#201;*            > 40 E9 C9 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001A6EBBCC210, 16 bytes long.
 Data: < W&#198;*            > F8 57 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001A6EBBCCAD0, 16 bytes long.
 Data: <&#216;W&#198;*            > D8 57 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001A6EBBCC850, 16 bytes long.
 Data: <P &#198;*            > 50 04 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001A6EBBCCD50, 16 bytes long.
 Data: <0 &#198;*            > 30 04 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001A6EBBCC3A0, 16 bytes long.
 Data: <  &#198;*            > E0 02 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001A6EBBCC760, 16 bytes long.
 Data: <  &#198;*            > 10 04 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001A6EBBCCE90, 16 bytes long.
 Data: <p &#198;*            > 70 04 C6 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001A6EBBCCFD0, 16 bytes long.
 Data: < &#192;&#196;*            > 18 C0 C4 2A F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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