Task 38650243

Name test_358-GPUGRID_TEST_ATM_4STEP_20261023-3-4-RND4693_0
Workunit 31594759
Created 23 Oct 2026, 23:02:59 UTC
Sent 24 Oct 2026, 0:50:45 UTC
Report deadline 29 Oct 2026, 0:50:45 UTC
Received 24 Oct 2026, 2:04:28 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 653145
Run time 33 min 29 sec
CPU time 32 min 15 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 10,909.22 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 719.79 MB
Peak swap size 6.85 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
04:31:35 (5752): wrapper (7.9.26016): starting
04:31:35 (5752): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
04:31:36 (5752): Library/usr/bin/tar.exe exited; CPU time 0.000000
04:31:36 (5752): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
05:04:08 (5752): C:/Windows/system32/cmd.exe exited; CPU time 1935.453125
05:04:08 (5752): called boinc_finish(0)
0 bytes in 0 Free Blocks.
566 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 26015821 bytes.
Dumping objects ->
{3835550} normal block at 0x000001EB6AEFE430, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835539} normal block at 0x000001EB69275D20, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835528} normal block at 0x000001EB69276260, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835517} normal block at 0x000001EB69276180, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835506} normal block at 0x000001EB69276110, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835475} normal block at 0x000001EB6AF47210, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835464} normal block at 0x000001EB6AFA6D40, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835461} normal block at 0x000001EB69270470, 8 bytes long.
 Data: <  wi&#235;   > 00 00 77 69 EB 01 00 00 
{3834689} normal block at 0x000001EB6AFA68E0, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x000001EB692707E0, 8 bytes long.
 Data: <&#208;:&#253;j&#235;   > D0 3A FD 6A EB 01 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x000001EB69272490, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001EB69267570, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x000001EB692769A0, 16 bytes long.
 Data: <xx'i&#235;           > 78 78 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001EB69276C70, 16 bytes long.
 Data: <Px'i&#235;           > 50 78 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001EB69271AC0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x000001EB692770D0, 16 bytes long.
 Data: <(x'i&#235;           > 28 78 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001EB692772B0, 16 bytes long.
 Data: < x'i&#235;           > 00 78 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001EB692774E0, 16 bytes long.
 Data: <&#216;w'i&#235;           > D8 77 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001EB69276D10, 16 bytes long.
 Data: <&#176;w'i&#235;           > B0 77 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001EB69275BD0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x000001EB69277170, 16 bytes long.
 Data: <  &i&#235;           > 08 00 26 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001EB69270F80, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x000001EB69276630, 16 bytes long.
 Data: <&#224;&#255;%i&#235;           > E0 FF 25 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001EB69276C20, 16 bytes long.
 Data: <&#184;&#255;%i&#235;           > B8 FF 25 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001EB69276A90, 16 bytes long.
 Data: <&#144;&#255;%i&#235;           > 90 FF 25 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001EB69276810, 16 bytes long.
 Data: <h&#255;%i&#235;           > 68 FF 25 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001EB69276F90, 16 bytes long.
 Data: <@&#255;%i&#235;           > 40 FF 25 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001EB692765E0, 16 bytes long.
 Data: < &#255;%i&#235;           > 18 FF 25 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001EB69270D40, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x000001EB692767C0, 16 bytes long.
 Data: <&#240;&#254;%i&#235;           > F0 FE 25 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001EB6925FEF0, 320 bytes long.
 Data: <&#192;g'i&#235;   @ 'i&#235;   > C0 67 27 69 EB 01 00 00 40 0D 27 69 EB 01 00 00 
{274} normal block at 0x000001EB69276B30, 16 bytes long.
 Data: <&#144;w'i&#235;           > 90 77 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001EB69276F40, 16 bytes long.
 Data: <hw'i&#235;           > 68 77 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001EB69271280, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x000001EB69276EF0, 16 bytes long.
 Data: <@w'i&#235;           > 40 77 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001EB69271A60, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x000001EB69276E50, 16 bytes long.
 Data: < v'i&#235;           > 88 76 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001EB692766D0, 16 bytes long.
 Data: <`v'i&#235;           > 60 76 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001EB69276E00, 16 bytes long.
 Data: <8v'i&#235;           > 38 76 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001EB69276BD0, 16 bytes long.
 Data: < v'i&#235;           > 10 76 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001EB69276EA0, 16 bytes long.
 Data: <&#232;u'i&#235;           > E8 75 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001EB69277120, 16 bytes long.
 Data: <&#192;u'i&#235;           > C0 75 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001EB69277490, 16 bytes long.
 Data: <P_'i&#235;           > 50 5F 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001EB69275F50, 40 bytes long.
 Data: <&#144;t'i&#235;    r&#244;j&#235;   > 90 74 27 69 EB 01 00 00 10 72 F4 6A EB 01 00 00 
{260} normal block at 0x000001EB69277080, 16 bytes long.
 Data: <&#160;u'i&#235;           > A0 75 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001EB69276B80, 16 bytes long.
 Data: <xu'i&#235;           > 78 75 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001EB692711C0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x000001EB69276FE0, 16 bytes long.
 Data: <Pu'i&#235;           > 50 75 27 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001EB69277550, 992 bytes long.
 Data: <&#224;o'i&#235;   &#192; 'i&#235;   > E0 6F 27 69 EB 01 00 00 C0 11 27 69 EB 01 00 00 
{92} normal block at 0x000001EB69271640, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000001EB69270290, 16 bytes long.
 Data: < &#166;&i&#235;           > 00 A6 26 69 EB 01 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000001EB6926A600, 40 bytes long.
 Data: <&#144; 'i&#235;   @ 'i&#235;   > 90 02 27 69 EB 01 00 00 40 16 27 69 EB 01 00 00 
{69} normal block at 0x000001EB692703D0, 16 bytes long.
 Data: <&#128;&#234;= &#247;           > 80 EA 3D 05 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001EB69270510, 16 bytes long.
 Data: <@&#233;= &#247;           > 40 E9 3D 05 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001EB69270790, 16 bytes long.
 Data: <&#248;W: &#247;           > F8 57 3A 05 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001EB69270880, 16 bytes long.
 Data: <&#216;W: &#247;           > D8 57 3A 05 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001EB69270920, 16 bytes long.
 Data: <P : &#247;           > 50 04 3A 05 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001EB6926FBB0, 16 bytes long.
 Data: <0 : &#247;           > 30 04 3A 05 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001EB69270740, 16 bytes long.
 Data: <&#224; : &#247;           > E0 02 3A 05 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001EB6926FED0, 16 bytes long.
 Data: <  : &#247;           > 10 04 3A 05 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001EB692701A0, 16 bytes long.
 Data: <p : &#247;           > 70 04 3A 05 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001EB69270330, 16 bytes long.
 Data: < &#192;8 &#247;           > 18 C0 38 05 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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