Task 38649952

Name test_656-GPUGRID_TEST_ATM_4STEP_20261023-1-4-RND5488_1
Workunit 31594265
Created 23 Oct 2026, 22:26:18 UTC
Sent 23 Oct 2026, 22:39:36 UTC
Report deadline 28 Oct 2026, 22:39:36 UTC
Received 24 Oct 2026, 0:40:31 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID 654766
Run time 2 min 9 sec
CPU time 10 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 35,585.07 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 341.70 MB
Peak swap size 7.68 GB
Peak disk usage 2.34 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<message>
The operating system cannot run (null).
 (0xc3) - exit code 195 (0xc3)</message>
<stderr_txt>
02:37:55 (2624): wrapper (7.9.26016): starting
02:37:55 (2624): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
02:37:58 (2624): Library/usr/bin/tar.exe exited; CPU time 0.000000
02:37:58 (2624): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\14\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\14\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Traceback (most recent call last):
  File "<frozen runpy>", line 198, in _run_module_as_main
  File "<frozen runpy>", line 88, in _run_code
  File "C:\ProgramData\BOINC\slots\14\Scripts\rbfe_production.exe\__main__.py", line 7, in <module>
  File "C:\ProgramData\BOINC\slots\14\Lib\site-packages\atom_openmm\rbfe_production.py", line 29, in rbfe_production
    rx = openmm_job_RBFE(
         ^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\14\Lib\site-packages\atom_openmm\openmm_async_re.py", line 427, in __init__
    self.service_worker = ommworkercls(self.basename, service_ommsys, self.keywords, compute = False, logger = self.logger)
                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\14\Lib\site-packages\atom_openmm\ommworker.py", line 53, in __init__
    self.start_worker()
  File "C:\ProgramData\BOINC\slots\14\Lib\site-packages\atom_openmm\ommworker.py", line 443, in start_worker
    self._openmm_worker_body()
  File "C:\ProgramData\BOINC\slots\14\Lib\site-packages\atom_openmm\ommworker.py", line 198, in _openmm_worker_body
    self.ommsystem.create_system()
  File "C:\ProgramData\BOINC\slots\14\Lib\site-packages\atom_openmm\ommsystem.py", line 872, in create_system
    self.load_system()
  File "C:\ProgramData\BOINC\slots\14\Lib\site-packages\atom_openmm\ommsystem.py", line 105, in load_system
    self.system = XmlSerializer.deserialize(input.read())
                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\14\Lib\site-packages\openmm\openmm.py", line 19621, in deserialize
    return XmlSerializer.deserializeSystem(inputString)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "C:\ProgramData\BOINC\slots\14\Lib\site-packages\openmm\openmm.py", line 19530, in deserializeSystem
    return _openmm.XmlSerializer_deserializeSystem(inputString)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
openmm.OpenMMException: Unknown property 'sig' in node 'Exception'
02:38:52 (2624): C:/Windows/system32/cmd.exe exited; CPU time 10.671875
02:38:52 (2624): app exit status: 0x16
02:38:52 (2624): called boinc_finish(195)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 905505 bytes.
Dumping objects ->
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{3835173} normal block at 0x0000027A6C201AA0, 48 bytes long.
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{3835162} normal block at 0x0000027A6C201A30, 48 bytes long.
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{3835151} normal block at 0x0000027A6C201950, 48 bytes long.
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{3835140} normal block at 0x0000027A6C2018E0, 48 bytes long.
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{3835109} normal block at 0x0000027A6DEC9F30, 64 bytes long.
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..\api\boinc_api.cpp(309) : {3835096} normal block at 0x0000027A6C1FE590, 8 bytes long.
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{3833957} normal block at 0x0000027A6C1FEE00, 8 bytes long.
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..\zip\boinc_zip.cpp(122) : {310} normal block at 0x0000027A6C1F69E0, 260 bytes long.
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{288} normal block at 0x0000027A6C202AC0, 16 bytes long.
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{287} normal block at 0x0000027A6C2015D0, 48 bytes long.
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{286} normal block at 0x0000027A6C2022F0, 16 bytes long.
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{285} normal block at 0x0000027A6C1FD8F0, 32 bytes long.
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{284} normal block at 0x0000027A6C202FC0, 16 bytes long.
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{282} normal block at 0x0000027A6C203060, 16 bytes long.
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{281} normal block at 0x0000027A6C2029D0, 16 bytes long.
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{280} normal block at 0x0000027A6C202250, 16 bytes long.
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{279} normal block at 0x0000027A6C203010, 16 bytes long.
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{277} normal block at 0x0000027A6C1FD590, 32 bytes long.
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{276} normal block at 0x0000027A6C202430, 16 bytes long.
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{275} normal block at 0x0000027A6C1EB350, 320 bytes long.
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{274} normal block at 0x0000027A6C202F70, 16 bytes long.
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{273} normal block at 0x0000027A6C202750, 16 bytes long.
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{272} normal block at 0x0000027A6C1FDD70, 32 bytes long.
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{271} normal block at 0x0000027A6C202200, 16 bytes long.
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{270} normal block at 0x0000027A6C1FDAD0, 32 bytes long.
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{268} normal block at 0x0000027A6C2024D0, 16 bytes long.
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{267} normal block at 0x0000027A6C1FEEA0, 16 bytes long.
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{266} normal block at 0x0000027A6C1FF440, 16 bytes long.
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{260} normal block at 0x0000027A6C1FEA90, 16 bytes long.
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{259} normal block at 0x0000027A6C1FE720, 16 bytes long.
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{258} normal block at 0x0000027A6C1FE010, 32 bytes long.
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{257} normal block at 0x0000027A6C1FF1C0, 16 bytes long.
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{92} normal block at 0x0000027A6C1FDB30, 32 bytes long.
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{91} normal block at 0x0000027A6C1FE900, 16 bytes long.
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{69} normal block at 0x0000027A6C1FEB30, 16 bytes long.
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{68} normal block at 0x0000027A6C1FECC0, 16 bytes long.
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{67} normal block at 0x0000027A6C1FF260, 16 bytes long.
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{66} normal block at 0x0000027A6C1FF490, 16 bytes long.
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{65} normal block at 0x0000027A6C1FF350, 16 bytes long.
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{64} normal block at 0x0000027A6C1FE540, 16 bytes long.
 Data: <0 &#185; &#246;           > 30 04 B9 1B F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000027A6C1FEDB0, 16 bytes long.
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{62} normal block at 0x0000027A6C1FEFE0, 16 bytes long.
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{61} normal block at 0x0000027A6C1FE630, 16 bytes long.
 Data: <p &#185; &#246;           > 70 04 B9 1B F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000027A6C1FF170, 16 bytes long.
 Data: < &#192;&#183; &#246;           > 18 C0 B7 1B F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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